RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 TOPBP1Q92547 1522 aa26.62■■□□□ 1.85
TDP2-202ENST00000378198 CUL7Q14999 1698 aa26.61■■□□□ 1.85
TDP2-202ENST00000378198 POLA1P09884 1462 aaPredicted RBP26.58■■□□□ 1.85
TDP2-202ENST00000378198 PCF11O94913 1555 aaKnown RBP26.58■■□□□ 1.85
TDP2-202ENST00000378198 CTTNBP2Q8WZ74 1663 aa26.57■■□□□ 1.84
TDP2-202ENST00000378198 YTHDC1Q96MU7 727 aaKnown RBP26.57■■□□□ 1.84
TDP2-202ENST00000378198 RAD54L2Q9Y4B4 1467 aa26.57■■□□□ 1.84
TDP2-202ENST00000378198 EFCAB5A4FU69 1503 aa26.56■■□□□ 1.84
TDP2-202ENST00000378198 RAB3GAP2Q9H2M9 1393 aa26.52■■□□□ 1.84
TDP2-202ENST00000378198 ITGAEP38570 1179 aa26.52■■□□□ 1.84
TDP2-202ENST00000378198 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
TDP2-202ENST00000378198 WDR97A6NE52 1622 aa26.49■■□□□ 1.83
TDP2-202ENST00000378198 NESP48681 1621 aa26.49■■□□□ 1.83
TDP2-202ENST00000378198 PHLDB1Q86UU1 1377 aa26.49■■□□□ 1.83
TDP2-202ENST00000378198 FYCO1Q9BQS8 1478 aa26.49■■□□□ 1.83
TDP2-202ENST00000378198 AQRO60306 1485 aaKnown RBP eCLIP26.48■■□□□ 1.831e-6■■■■□ 26.1
TDP2-202ENST00000378198 SETD5Q9C0A6 1442 aa26.48■■□□□ 1.83
TDP2-202ENST00000378198 MAPKBP1O60336 1514 aa26.45■■□□□ 1.82
TDP2-202ENST00000378198 CASKIN1Q8WXD9 1431 aa26.44■■□□□ 1.82
TDP2-202ENST00000378198 FHOD3Q2V2M9 1422 aa26.43■■□□□ 1.82
TDP2-202ENST00000378198 P3H3Q8IVL6 736 aa26.42■■□□□ 1.82
TDP2-202ENST00000378198 URB2Q14146 1524 aaKnown RBP26.37■■□□□ 1.81
TDP2-202ENST00000378198 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.36■■□□□ 1.81
TDP2-202ENST00000378198 FAM50AQ14320 339 aaKnown RBP26.35■■□□□ 1.81
TDP2-202ENST00000378198 ABCA5Q8WWZ7 1642 aa26.35■■□□□ 1.81
TDP2-202ENST00000378198 FMN1Q68DA7 1419 aa26.35■■□□□ 1.81
TDP2-202ENST00000378198 ATP1B4Q9UN42 357 aaPredicted RBP26.34■■□□□ 1.81
TDP2-202ENST00000378198 SAMD9Q5K651 1589 aa26.29■■□□□ 1.8
TDP2-202ENST00000378198 SNAPC4Q5SXM2 1469 aa26.28■■□□□ 1.8
TDP2-202ENST00000378198 PDS5BQ9NTI5 1447 aa26.25■■□□□ 1.79
TDP2-202ENST00000378198 GAPVD1Q14C86 1478 aa26.24■■□□□ 1.79
TDP2-202ENST00000378198 TIMELESSQ9UNS1 1208 aa26.22■■□□□ 1.79
TDP2-202ENST00000378198 LRRIQ1Q96JM4 1722 aa26.21■■□□□ 1.79
TDP2-202ENST00000378198 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.78
TDP2-202ENST00000378198 FGD6Q6ZV73 1430 aa26.19■■□□□ 1.78
TDP2-202ENST00000378198 THOC2Q8NI27 1593 aaKnown RBP26.19■■□□□ 1.78
TDP2-202ENST00000378198 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
TDP2-202ENST00000378198 MTUS2Q5JR59 1369 aa26.15■■□□□ 1.78
TDP2-202ENST00000378198 GRIN2BQ13224 1484 aa26.14■■□□□ 1.77
TDP2-202ENST00000378198 SIN3AQ96ST3 1273 aa26.13■■□□□ 1.77
TDP2-202ENST00000378198 SUPT6HQ7KZ85 1726 aaKnown RBP26.12■■□□□ 1.77
TDP2-202ENST00000378198 TARBP1Q13395 1621 aaKnown RBP26.12■■□□□ 1.77
TDP2-202ENST00000378198 EHBP1L1Q8N3D4 1523 aa26.08■■□□□ 1.77
TDP2-202ENST00000378198 PBRM1Q86U86 1689 aa26.07■■□□□ 1.76
TDP2-202ENST00000378198 NCOA2Q15596 1464 aa26.06■■□□□ 1.76
TDP2-202ENST00000378198 MYOM3Q5VTT5 1437 aa26.05■■□□□ 1.76
TDP2-202ENST00000378198 PTPN23Q9H3S7 1636 aa26.04■■□□□ 1.76
TDP2-202ENST00000378198 HFM1A2PYH4 1435 aa26.04■■□□□ 1.76
TDP2-202ENST00000378198 CCDC18Q5T9S5 1454 aa26.04■■□□□ 1.76
TDP2-202ENST00000378198 PPP1R15AO75807 674 aaPredicted RBP26■■□□□ 1.75
TDP2-202ENST00000378198 UACAQ9BZF9 1416 aa25.99■■□□□ 1.75
TDP2-202ENST00000378198 PTPRKQ15262 1439 aa25.99■■□□□ 1.75
TDP2-202ENST00000378198 UGGT2Q9NYU1 1516 aa25.98■■□□□ 1.75
TDP2-202ENST00000378198 ARHGEF11O15085 1522 aa25.97■■□□□ 1.75
TDP2-202ENST00000378198 HECW1Q76N89 1606 aa25.96■■□□□ 1.75
TDP2-202ENST00000378198 IQGAP2Q13576 1575 aa25.94■■□□□ 1.74
TDP2-202ENST00000378198 NAIPQ13075 1403 aa25.93■■□□□ 1.74
TDP2-202ENST00000378198 ADAMTS12P58397 1594 aa25.92■■□□□ 1.74
TDP2-202ENST00000378198 MAGI3Q5TCQ9 1506 aa25.91■■□□□ 1.74
TDP2-202ENST00000378198 DNAJC5BQ9UF47 199 aa25.91■■□□□ 1.74
TDP2-202ENST00000378198 TONSLQ96HA7 1378 aa25.9■■□□□ 1.74
TDP2-202ENST00000378198 DDX10Q13206 875 aaKnown RBP25.9■■□□□ 1.74
TDP2-202ENST00000378198 TCOF1Q13428 1488 aaKnown RBP25.89■■□□□ 1.73
TDP2-202ENST00000378198 GCC2Q8IWJ2 1684 aa25.87■■□□□ 1.73
TDP2-202ENST00000378198 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
TDP2-202ENST00000378198 SUPT16HQ9Y5B9 1047 aaKnown RBP25.84■■□□□ 1.73
TDP2-202ENST00000378198 EPRSP07814 1512 aaKnown RBP25.83■■□□□ 1.73
TDP2-202ENST00000378198 KCNH8Q96L42 1107 aa25.81■■□□□ 1.72
TDP2-202ENST00000378198 AKNAQ7Z591 1439 aa25.79■■□□□ 1.72
TDP2-202ENST00000378198 WDR62O43379 1518 aa25.79■■□□□ 1.72
TDP2-202ENST00000378198 MIA2Q96PC5 1412 aa25.77■■□□□ 1.72
TDP2-202ENST00000378198 CCER2I3L3R5 266 aa25.75■■□□□ 1.71
TDP2-202ENST00000378198 CDK13Q14004 1512 aaKnown RBP25.72■■□□□ 1.71
TDP2-202ENST00000378198 HIRIP3Q9BW71 556 aaPredicted RBP25.72■■□□□ 1.71
TDP2-202ENST00000378198 IFT140Q96RY7 1462 aa25.72■■□□□ 1.71
TDP2-202ENST00000378198 KDM5BQ9UGL1 1544 aa25.71■■□□□ 1.71
TDP2-202ENST00000378198 ANP32CO43423 234 aa25.71■■□□□ 1.71
TDP2-202ENST00000378198 RRP7BPQ9NSQ0 103 aa25.68■■□□□ 1.7
TDP2-202ENST00000378198 KIAA0556O60303 1618 aa25.66■■□□□ 1.7
TDP2-202ENST00000378198 KIAA0586Q9BVV6 1533 aa25.65■■□□□ 1.7
TDP2-202ENST00000378198 KDM6BO15054 1643 aa25.64■■□□□ 1.7
TDP2-202ENST00000378198 CHIC2Q9UKJ5 165 aa25.64■■□□□ 1.7
TDP2-202ENST00000378198 DENND4BO75064 1496 aaPredicted RBP25.63■■□□□ 1.69
TDP2-202ENST00000378198 ZNF608Q9ULD9 1512 aaPredicted RBP25.62■■□□□ 1.69
TDP2-202ENST00000378198 DISP1Q96F81 1524 aa25.6■■□□□ 1.69
TDP2-202ENST00000378198 TRIM52Q96A61 297 aa25.6■■□□□ 1.69
TDP2-202ENST00000378198 RAPGEF6Q8TEU7 1601 aa25.59■■□□□ 1.69
TDP2-202ENST00000378198 DNMT1P26358 1616 aaKnown RBP25.58■■□□□ 1.68
TDP2-202ENST00000378198 ROCK1Q13464 1354 aa25.57■■□□□ 1.68
TDP2-202ENST00000378198 MYT1Q01538 1121 aa25.55■■□□□ 1.68
TDP2-202ENST00000378198 MPHOSPH9Q99550 1183 aa25.54■■□□□ 1.68
TDP2-202ENST00000378198 DAPK1P53355 1430 aa25.54■■□□□ 1.68
TDP2-202ENST00000378198 GRIN2AQ12879 1464 aa25.54■■□□□ 1.68
TDP2-202ENST00000378198 EIF4G3O43432 1585 aaKnown RBP25.54■■□□□ 1.68
TDP2-202ENST00000378198 NUP153P49790 1475 aaKnown RBP25.53■■□□□ 1.68
TDP2-202ENST00000378198 ARID3CA6NKF2 412 aa25.49■■□□□ 1.67
TDP2-202ENST00000378198 CDK11AQ9UQ88 783 aaPredicted RBP25.49■■□□□ 1.67
TDP2-202ENST00000378198 ABCC5O15440 1437 aa25.48■■□□□ 1.67
TDP2-202ENST00000378198 HSPA5P11021 654 aaKnown RBP25.46■■□□□ 1.67
TDP2-202ENST00000378198 ITSN2Q9NZM3 1697 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms