RNA–Protein interactions for RNA: ENST00000377192.6

KNTC1-202, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,519 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-202ENST00000377192 FARP1Q9Y4F1 1045 aaPredicted RBP9.75□□□□□ -0.85
KNTC1-202ENST00000377192 SMARCA4P51532 1647 aa9.73□□□□□ -0.85
KNTC1-202ENST00000377192 METRNQ9UJH8 293 aa9.72□□□□□ -0.85
KNTC1-202ENST00000377192 ZRANB1Q9UGI0 708 aa9.71□□□□□ -0.86
KNTC1-202ENST00000377192 POTEJP0CG39 1038 aa9.7□□□□□ -0.86
KNTC1-202ENST00000377192 SLC39A7Q92504 469 aa9.68□□□□□ -0.86
KNTC1-202ENST00000377192 C7P10643 843 aa9.67□□□□□ -0.86
KNTC1-202ENST00000377192 HMGXB3Q12766 1538 aa9.64□□□□□ -0.87
KNTC1-202ENST00000377192 SMARCA2P51531 1590 aa9.64□□□□□ -0.87
KNTC1-202ENST00000377192 PELP1Q8IZL8 1130 aaKnown RBP9.63□□□□□ -0.87
KNTC1-202ENST00000377192 ATAD2BQ9ULI0 1458 aa9.62□□□□□ -0.87
KNTC1-202ENST00000377192 BAZ1AQ9NRL2 1556 aaPredicted RBP9.62□□□□□ -0.87
KNTC1-202ENST00000377192 ERCC6Q03468 1493 aa9.6□□□□□ -0.87
KNTC1-202ENST00000377192 SSUH2Q9Y2M2 353 aa9.6□□□□□ -0.87
KNTC1-202ENST00000377192 NCAPD3P42695 1498 aa9.59□□□□□ -0.87
KNTC1-202ENST00000377192 BAZ1BQ9UIG0 1483 aaKnown RBP9.58□□□□□ -0.88
KNTC1-202ENST00000377192 ATF5Q9Y2D1 282 aaPredicted RBP9.58□□□□□ -0.88
KNTC1-202ENST00000377192 KIF21AQ7Z4S6 1674 aa9.57□□□□□ -0.88
KNTC1-202ENST00000377192 FBLN2P98095 1184 aa9.56□□□□□ -0.88
KNTC1-202ENST00000377192 NESP48681 1621 aa9.56□□□□□ -0.88
KNTC1-202ENST00000377192 MROH2BQ7Z745 1585 aa9.56□□□□□ -0.88
KNTC1-202ENST00000377192 PEG3Q9GZU2 1588 aa9.56□□□□□ -0.88
KNTC1-202ENST00000377192 ZNF692Q9BU19 519 aaPredicted RBP9.54□□□□□ -0.88
KNTC1-202ENST00000377192 THOC2Q8NI27 1593 aaKnown RBP9.54□□□□□ -0.88
KNTC1-202ENST00000377192 WIZO95785 1651 aa9.53□□□□□ -0.88
KNTC1-202ENST00000377192 CUX2O14529 1486 aa9.53□□□□□ -0.88
KNTC1-202ENST00000377192 ASTLQ6HA08 431 aaPredicted RBP9.52□□□□□ -0.88
KNTC1-202ENST00000377192 LAMC3Q9Y6N6 1575 aa9.49□□□□□ -0.89
KNTC1-202ENST00000377192 PAK3O75914 559 aaPredicted RBP9.46□□□□□ -0.89
KNTC1-202ENST00000377192 ATMINO43313 823 aaPredicted RBP9.44□□□□□ -0.9
KNTC1-202ENST00000377192 ST18O60284 1047 aa9.44□□□□□ -0.9
KNTC1-202ENST00000377192 PRDM2Q13029 1718 aa9.41□□□□□ -0.9
KNTC1-202ENST00000377192 PHF12Q96QT6 1004 aa9.39□□□□□ -0.91
KNTC1-202ENST00000377192 TMEM121BQ9BXQ6 578 aaPredicted RBP9.36□□□□□ -0.91
KNTC1-202ENST00000377192 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
KNTC1-202ENST00000377192 TOP2AP11388 1531 aaKnown RBP9.35□□□□□ -0.91
KNTC1-202ENST00000377192 WDR62O43379 1518 aa9.34□□□□□ -0.91
KNTC1-202ENST00000377192 PDS5BQ9NTI5 1447 aa9.34□□□□□ -0.91
KNTC1-202ENST00000377192 MRC2Q9UBG0 1479 aa9.33□□□□□ -0.92
KNTC1-202ENST00000377192 CEP164Q9UPV0 1460 aa9.32□□□□□ -0.92
KNTC1-202ENST00000377192 CADPSQ9ULU8 1353 aa9.3□□□□□ -0.92
KNTC1-202ENST00000377192 FANCD2Q9BXW9 1451 aa9.29□□□□□ -0.92
KNTC1-202ENST00000377192 RSF1Q96T23 1441 aaPredicted RBP9.28□□□□□ -0.92
KNTC1-202ENST00000377192 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
KNTC1-202ENST00000377192 CFTRP13569 1480 aa9.24□□□□□ -0.93
KNTC1-202ENST00000377192 URB2Q14146 1524 aaKnown RBP9.23□□□□□ -0.93
KNTC1-202ENST00000377192 POTEFA5A3E0 1075 aa9.22□□□□□ -0.93
KNTC1-202ENST00000377192 SLAIN1Q8ND83 568 aa9.22□□□□□ -0.93
KNTC1-202ENST00000377192 ATN1P54259 1190 aaPredicted RBP9.21□□□□□ -0.94
KNTC1-202ENST00000377192 SUPT5HO00267 1087 aaKnown RBP9.19□□□□□ -0.94
KNTC1-202ENST00000377192 CCDC88BA6NC98 1476 aa9.17□□□□□ -0.94
KNTC1-202ENST00000377192 EIF4G3O43432 1585 aaKnown RBP9.16□□□□□ -0.94
KNTC1-202ENST00000377192 CHD1O14646 1710 aa9.15□□□□□ -0.94
KNTC1-202ENST00000377192 SNPHO15079 494 aa9.15□□□□□ -0.95
KNTC1-202ENST00000377192 DNMBPQ6XZF7 1577 aa9.13□□□□□ -0.95
KNTC1-202ENST00000377192 SEC24BO95487 1268 aa9.13□□□□□ -0.95
KNTC1-202ENST00000377192 TOPBP1Q92547 1522 aa9.13□□□□□ -0.95
KNTC1-202ENST00000377192 CREBZFQ9NS37 354 aa9.12□□□□□ -0.95
KNTC1-202ENST00000377192 MKRN4PQ13434 485 aaPredicted RBP9.11□□□□□ -0.95
KNTC1-202ENST00000377192 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
KNTC1-202ENST00000377192 KRTAP3-2Q9BYR7 98 aa9.11□□□□□ -0.95
KNTC1-202ENST00000377192 ZNF608Q9ULD9 1512 aaPredicted RBP9.11□□□□□ -0.95
KNTC1-202ENST00000377192 TRIM41Q8WV44 630 aa9.1□□□□□ -0.95
KNTC1-202ENST00000377192 MARVELD3Q96A59 401 aa9.1□□□□□ -0.95
KNTC1-202ENST00000377192 RIMBP3CA6NJZ7 1639 aa9.09□□□□□ -0.96
KNTC1-202ENST00000377192 RIMBP3BA6NNM3 1639 aa9.09□□□□□ -0.96
KNTC1-202ENST00000377192 RIMBP3Q9UFD9 1639 aa9.09□□□□□ -0.96
KNTC1-202ENST00000377192 RNF166Q96A37 237 aaPredicted RBP9.08□□□□□ -0.96
KNTC1-202ENST00000377192 TARBP1Q13395 1621 aaKnown RBP9.08□□□□□ -0.96
KNTC1-202ENST00000377192 IFT140Q96RY7 1462 aa9.08□□□□□ -0.96
KNTC1-202ENST00000377192 KCNA4P22459 653 aa9.07□□□□□ -0.96
KNTC1-202ENST00000377192 NPM1P06748 294 aaKnown RBP eCLIP9.06□□□□□ -0.96
KNTC1-202ENST00000377192 WDR97A6NE52 1622 aa9.05□□□□□ -0.96
KNTC1-202ENST00000377192 PBRM1Q86U86 1689 aa9.05□□□□□ -0.96
KNTC1-202ENST00000377192 FOXD4L1Q9NU39 408 aa9.05□□□□□ -0.96
KNTC1-202ENST00000377192 COLQQ9Y215 455 aaPredicted RBP9.03□□□□□ -0.96
KNTC1-202ENST00000377192 POLA1P09884 1462 aaPredicted RBP9.03□□□□□ -0.96
KNTC1-202ENST00000377192 ABCC8Q09428 1581 aa9.02□□□□□ -0.97
KNTC1-202ENST00000377192 EMP3P54852 163 aa9.02□□□□□ -0.97
KNTC1-202ENST00000377192 BMP2KQ9NSY1 1161 aaPredicted RBP9□□□□□ -0.97
KNTC1-202ENST00000377192 ARHGEF11O15085 1522 aa9□□□□□ -0.97
KNTC1-202ENST00000377192 FGD5Q6ZNL6 1462 aa9□□□□□ -0.97
KNTC1-202ENST00000377192 CUX1P39880 1505 aa9□□□□□ -0.97
KNTC1-202ENST00000377192 RAD54L2Q9Y4B4 1467 aa8.99□□□□□ -0.97
KNTC1-202ENST00000377192 AQRO60306 1485 aaKnown RBP eCLIP8.98□□□□□ -0.975e-7■■□□□ 12.8
KNTC1-202ENST00000377192 TIE1P35590 1138 aa8.98□□□□□ -0.97
KNTC1-202ENST00000377192 IER5LQ5T953 404 aa8.98□□□□□ -0.97
KNTC1-202ENST00000377192 HS3ST6Q96QI5 342 aa8.96□□□□□ -0.97
KNTC1-202ENST00000377192 SNAPC4Q5SXM2 1469 aa8.96□□□□□ -0.97
KNTC1-202ENST00000377192 ATXN8OSP0DMR3 200 aa8.95□□□□□ -0.98
KNTC1-202ENST00000377192 ABCA5Q8WWZ7 1642 aa8.94□□□□□ -0.98
KNTC1-202ENST00000377192 STAG3Q9UJ98 1225 aa8.92□□□□□ -0.98
KNTC1-202ENST00000377192 SOGA1O94964 1423 aa8.92□□□□□ -0.98
KNTC1-202ENST00000377192 BIVM-ERCC5R4GMW8 1640 aa8.91□□□□□ -0.98
KNTC1-202ENST00000377192 SYNJ1O43426 1573 aa8.91□□□□□ -0.98
KNTC1-202ENST00000377192 CLASP1Q7Z460 1538 aa8.91□□□□□ -0.98
KNTC1-202ENST00000377192 ARAP1Q96P48 1450 aa8.91□□□□□ -0.98
KNTC1-202ENST00000377192 TDRD9Q8NDG6 1382 aaKnown RBP8.91□□□□□ -0.98
KNTC1-202ENST00000377192 MAGI1Q96QZ7 1491 aaPredicted RBP8.89□□□□□ -0.99
KNTC1-202ENST00000377192 MYT1LQ9UL68 1186 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms