RNA–Protein interactions for RNA: ENST00000377192.6

KNTC1-202, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,519 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-202ENST00000377192 AEBP2Q6ZN18 517 aaPredicted RBP19.86■□□□□ 0.77
KNTC1-202ENST00000377192 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
KNTC1-202ENST00000377192 POTEDQ86YR6 584 aa17.73■□□□□ 0.43
KNTC1-202ENST00000377192 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
KNTC1-202ENST00000377192 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
KNTC1-202ENST00000377192 FOXD1Q16676 465 aa16.22■□□□□ 0.19
KNTC1-202ENST00000377192 MSH5O43196 834 aa15.9■□□□□ 0.14
KNTC1-202ENST00000377192 PIAS4Q8N2W9 510 aaPredicted RBP14.9□□□□□ -0.02
KNTC1-202ENST00000377192 CACNB1Q02641 598 aaPredicted RBP14.42□□□□□ -0.1
KNTC1-202ENST00000377192 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
KNTC1-202ENST00000377192 ADRA2BP18089 450 aa13.91□□□□□ -0.18
KNTC1-202ENST00000377192 POTEHQ6S545 545 aa13.65□□□□□ -0.22
KNTC1-202ENST00000377192 PLPPR3Q6T4P5 718 aa13.55□□□□□ -0.24
KNTC1-202ENST00000377192 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
KNTC1-202ENST00000377192 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
KNTC1-202ENST00000377192 MAPK8IP2Q13387 824 aaPredicted RBP13.15□□□□□ -0.3
KNTC1-202ENST00000377192 C1QBPQ07021 282 aaKnown RBP13.14□□□□□ -0.31
KNTC1-202ENST00000377192 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.33
KNTC1-202ENST00000377192 SCAF1Q9H7N4 1312 aaKnown RBP12.98□□□□□ -0.33
KNTC1-202ENST00000377192 HOXD11P31277 338 aaPredicted RBP12.47□□□□□ -0.41
KNTC1-202ENST00000377192 DNAJC5BQ9UF47 199 aa12.44□□□□□ -0.42
KNTC1-202ENST00000377192 NISCHQ9Y2I1 1504 aa12.36□□□□□ -0.43
KNTC1-202ENST00000377192 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
KNTC1-202ENST00000377192 RNF216Q9NWF9 866 aaPredicted RBP12.02□□□□□ -0.48
KNTC1-202ENST00000377192 DSG3P32926 999 aa11.99□□□□□ -0.49
KNTC1-202ENST00000377192 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.52e-6■■□□□ 12
KNTC1-202ENST00000377192 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
KNTC1-202ENST00000377192 CHRDL2Q6WN34 429 aa11.82□□□□□ -0.52
KNTC1-202ENST00000377192 CNKSR2Q8WXI2 1034 aa11.79□□□□□ -0.52
KNTC1-202ENST00000377192 CAPN15O75808 1086 aa11.78□□□□□ -0.52
KNTC1-202ENST00000377192 RBM42Q9BTD8 480 aaKnown RBP11.66□□□□□ -0.54
KNTC1-202ENST00000377192 SPINK5Q9NQ38 1064 aaPredicted RBP11.62□□□□□ -0.55
KNTC1-202ENST00000377192 PPP4R3CPQ6ZMV5 832 aa11.61□□□□□ -0.55
KNTC1-202ENST00000377192 U3KPZ7 1027 aaPredicted RBP11.43□□□□□ -0.58
KNTC1-202ENST00000377192 HAX1O00165 279 aa11.41□□□□□ -0.58
KNTC1-202ENST00000377192 LHX8Q68G74 356 aa11.38□□□□□ -0.59
KNTC1-202ENST00000377192 ABCB7O75027 752 aa11.31□□□□□ -0.6
KNTC1-202ENST00000377192 ZNF219Q9P2Y4 722 aaPredicted RBP11.28□□□□□ -0.6
KNTC1-202ENST00000377192 APLP2Q06481 763 aa11.24□□□□□ -0.61
KNTC1-202ENST00000377192 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
KNTC1-202ENST00000377192 CCDC180Q9P1Z9 1646 aa11.2□□□□□ -0.62
KNTC1-202ENST00000377192 PIP4P2Q8N4L2 257 aa11.2□□□□□ -0.62
KNTC1-202ENST00000377192 ABCC9O60706 1549 aa11.12□□□□□ -0.63
KNTC1-202ENST00000377192 AKT1S1Q96B36 256 aa11.02□□□□□ -0.65
KNTC1-202ENST00000377192 EVX2Q03828 476 aa10.99□□□□□ -0.65
KNTC1-202ENST00000377192 FXR2P51116 673 aaKnown RBP eCLIP10.94□□□□□ -0.662e-6■□□□□ 10.3
KNTC1-202ENST00000377192 NCBP3Q53F19 620 aaKnown RBP10.89□□□□□ -0.67
KNTC1-202ENST00000377192 REM2Q8IYK8 340 aaPredicted RBP10.84□□□□□ -0.67
KNTC1-202ENST00000377192 PCDH10Q9P2E7 1040 aa10.84□□□□□ -0.67
KNTC1-202ENST00000377192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.82□□□□□ -0.68
KNTC1-202ENST00000377192 HNRNPUL2Q1KMD3 747 aaKnown RBP10.82□□□□□ -0.68
KNTC1-202ENST00000377192 GABBR2O75899 941 aa10.8□□□□□ -0.68
KNTC1-202ENST00000377192 POTEMA6NI47 508 aa10.79□□□□□ -0.68
KNTC1-202ENST00000377192 PITPNM1O00562 1244 aa10.74□□□□□ -0.69
KNTC1-202ENST00000377192 POTEGQ6S5H5 508 aa10.7□□□□□ -0.7
KNTC1-202ENST00000377192 C19orf67A6NJJ6 358 aa10.65□□□□□ -0.7
KNTC1-202ENST00000377192 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
KNTC1-202ENST00000377192 RB1CC1Q8TDY2 1594 aa10.59□□□□□ -0.71
KNTC1-202ENST00000377192 POLA2Q14181 598 aa10.58□□□□□ -0.72
KNTC1-202ENST00000377192 NPM3O75607 178 aaKnown RBP10.57□□□□□ -0.72
KNTC1-202ENST00000377192 UNC13AQ9UPW8 1703 aa10.54□□□□□ -0.72
KNTC1-202ENST00000377192 POTEIP0CG38 1075 aa10.48□□□□□ -0.73
KNTC1-202ENST00000377192 NACADO15069 1562 aa10.48□□□□□ -0.73
KNTC1-202ENST00000377192 PRKAR2AP13861 404 aaKnown RBP10.47□□□□□ -0.73
KNTC1-202ENST00000377192 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
KNTC1-202ENST00000377192 SLC4A2P04920 1241 aa10.39□□□□□ -0.75
KNTC1-202ENST00000377192 OTUD5Q96G74 571 aa10.39□□□□□ -0.75
KNTC1-202ENST00000377192 CLCN6P51797 869 aa10.38□□□□□ -0.75
KNTC1-202ENST00000377192 DCAF8L2P0C7V8 631 aa10.37□□□□□ -0.75
KNTC1-202ENST00000377192 OSCARQ8IYS5 282 aa10.32□□□□□ -0.76
KNTC1-202ENST00000377192 DCBLD2Q96PD2 775 aa10.3□□□□□ -0.76
KNTC1-202ENST00000377192 BICRAQ9NZM4 1560 aa10.29□□□□□ -0.76
KNTC1-202ENST00000377192 ZCCHC6Q5VYS8 1495 aaKnown RBP10.28□□□□□ -0.76
KNTC1-202ENST00000377192 PABPN1Q86U42 306 aaKnown RBP eCLIP10.27□□□□□ -0.772e-7■■■■■ 27.8
KNTC1-202ENST00000377192 MYO15BQ96JP2 1530 aa10.26□□□□□ -0.77
KNTC1-202ENST00000377192 SCRIBQ14160 1630 aa10.25□□□□□ -0.77
KNTC1-202ENST00000377192 DCAF1Q9Y4B6 1507 aa10.16□□□□□ -0.78
KNTC1-202ENST00000377192 SPDYE1Q8NFV5 336 aaPredicted RBP10.12□□□□□ -0.79
KNTC1-202ENST00000377192 CLEC11AQ9Y240 323 aa10.09□□□□□ -0.79
KNTC1-202ENST00000377192 CC2D2AQ9P2K1 1620 aa10.08□□□□□ -0.8
KNTC1-202ENST00000377192 POTEB2H3BUK9 544 aa10.07□□□□□ -0.8
KNTC1-202ENST00000377192 CD44P16070 742 aaKnown RBP10.07□□□□□ -0.8
KNTC1-202ENST00000377192 SHROOM4Q9ULL8 1493 aa10.07□□□□□ -0.8
KNTC1-202ENST00000377192 LCE2DQ5TA82 110 aaPredicted RBP10.04□□□□□ -0.8
KNTC1-202ENST00000377192 EIF4G1Q04637 1599 aaKnown RBP10.04□□□□□ -0.8
KNTC1-202ENST00000377192 FAM163AQ96GL9 167 aaPredicted RBP10.01□□□□□ -0.81
KNTC1-202ENST00000377192 CDAN1Q8IWY9 1227 aa9.99□□□□□ -0.81
KNTC1-202ENST00000377192 MAMSTRQ6ZN01 415 aa9.97□□□□□ -0.81
KNTC1-202ENST00000377192 CECR2Q9BXF3 1484 aa9.97□□□□□ -0.81
KNTC1-202ENST00000377192 CHADLQ6NUI6 762 aa9.97□□□□□ -0.81
KNTC1-202ENST00000377192 SPDYE2BA6NHP3 402 aa9.94□□□□□ -0.82
KNTC1-202ENST00000377192 SPDYE6P0CI01 402 aa9.94□□□□□ -0.82
KNTC1-202ENST00000377192 SPDYE2Q495Y8 402 aa9.94□□□□□ -0.82
KNTC1-202ENST00000377192 MYCNP04198 464 aaPredicted RBP9.92□□□□□ -0.82
KNTC1-202ENST00000377192 MMRN1Q13201 1228 aa9.92□□□□□ -0.82
KNTC1-202ENST00000377192 ZNF579Q8NAF0 562 aaKnown RBP9.88□□□□□ -0.83
KNTC1-202ENST00000377192 SCUBE2Q9NQ36 999 aa9.82□□□□□ -0.84
KNTC1-202ENST00000377192 SPNS2Q8IVW8 549 aa9.77□□□□□ -0.85
KNTC1-202ENST00000377192 PRR29P0C7W0 189 aa9.76□□□□□ -0.85
KNTC1-202ENST00000377192 GALR2O43603 387 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms