RNA–Protein interactions for RNA: ENST00000377181.2

KCNIP3-203, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 5

Gene KCNIP3, Length 2,971 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-203ENST00000377181 CLSPNQ9HAW4 1339 aa18.5■□□□□ 0.55
KCNIP3-203ENST00000377181 DDX10Q13206 875 aaKnown RBP18.49■□□□□ 0.55
KCNIP3-203ENST00000377181 CUX2O14529 1486 aa18.47■□□□□ 0.55
KCNIP3-203ENST00000377181 IGF1RP08069 1367 aa18.44■□□□□ 0.54
KCNIP3-203ENST00000377181 NCAPD3P42695 1498 aa18.42■□□□□ 0.54
KCNIP3-203ENST00000377181 PHLDB1Q86UU1 1377 aa18.41■□□□□ 0.54
KCNIP3-203ENST00000377181 CFTRP13569 1480 aa18.39■□□□□ 0.54
KCNIP3-203ENST00000377181 CARMIL1Q5VZK9 1371 aa18.38■□□□□ 0.53
KCNIP3-203ENST00000377181 MAPKBP1O60336 1514 aa18.35■□□□□ 0.53
KCNIP3-203ENST00000377181 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
KCNIP3-203ENST00000377181 PLPPR3Q6T4P5 718 aa18.35■□□□□ 0.53
KCNIP3-203ENST00000377181 TRIM52Q96A61 297 aa18.33■□□□□ 0.52
KCNIP3-203ENST00000377181 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
KCNIP3-203ENST00000377181 SETD5Q9C0A6 1442 aa18.32■□□□□ 0.52
KCNIP3-203ENST00000377181 TSHZ2Q9NRE2 1034 aa18.32■□□□□ 0.52
KCNIP3-203ENST00000377181 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
KCNIP3-203ENST00000377181 WDR97A6NE52 1622 aa18.3■□□□□ 0.52
KCNIP3-203ENST00000377181 FKBP8Q14318 412 aa18.3■□□□□ 0.52
KCNIP3-203ENST00000377181 FHOD3Q2V2M9 1422 aa18.29■□□□□ 0.52
KCNIP3-203ENST00000377181 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
KCNIP3-203ENST00000377181 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.52
KCNIP3-203ENST00000377181 TIAM1Q13009 1591 aa18.27■□□□□ 0.51
KCNIP3-203ENST00000377181 CADPSQ9ULU8 1353 aa18.24■□□□□ 0.51
KCNIP3-203ENST00000377181 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
KCNIP3-203ENST00000377181 PPP1R15AO75807 674 aaPredicted RBP18.19■□□□□ 0.5
KCNIP3-203ENST00000377181 ARID3CA6NKF2 412 aa18.18■□□□□ 0.5
KCNIP3-203ENST00000377181 NESP48681 1621 aa18.17■□□□□ 0.5
KCNIP3-203ENST00000377181 NCBP3Q53F19 620 aaKnown RBP18.17■□□□□ 0.5
KCNIP3-203ENST00000377181 PCF11O94913 1555 aaKnown RBP18.17■□□□□ 0.5
KCNIP3-203ENST00000377181 RTN4Q9NQC3 1192 aaKnown RBP18.15■□□□□ 0.5
KCNIP3-203ENST00000377181 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
KCNIP3-203ENST00000377181 ANP32CO43423 234 aa18.13■□□□□ 0.49
KCNIP3-203ENST00000377181 FHAD1B1AJZ9 1412 aa18.12■□□□□ 0.49
KCNIP3-203ENST00000377181 IRX6P78412 446 aaPredicted RBP18.11■□□□□ 0.49
KCNIP3-203ENST00000377181 TONSLQ96HA7 1378 aa18.09■□□□□ 0.49
KCNIP3-203ENST00000377181 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
KCNIP3-203ENST00000377181 RRP7BPQ9NSQ0 103 aa18.09■□□□□ 0.49
KCNIP3-203ENST00000377181 PTPRKQ15262 1439 aa18.07■□□□□ 0.48
KCNIP3-203ENST00000377181 MTUS2Q5JR59 1369 aa18.07■□□□□ 0.48
KCNIP3-203ENST00000377181 TDRD9Q8NDG6 1382 aaKnown RBP18.07■□□□□ 0.48
KCNIP3-203ENST00000377181 NEFLP07196 543 aa18.05■□□□□ 0.48
KCNIP3-203ENST00000377181 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
KCNIP3-203ENST00000377181 FOXD1Q16676 465 aa18.02■□□□□ 0.48
KCNIP3-203ENST00000377181 CNGB1Q14028 1251 aaPredicted RBP18.02■□□□□ 0.47
KCNIP3-203ENST00000377181 EIF5BO60841 1220 aaKnown RBP18.01■□□□□ 0.47
KCNIP3-203ENST00000377181 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
KCNIP3-203ENST00000377181 FGD6Q6ZV73 1430 aa18.01■□□□□ 0.47
KCNIP3-203ENST00000377181 AQRO60306 1485 aaKnown RBP eCLIP17.99■□□□□ 0.47
KCNIP3-203ENST00000377181 HNRNPUQ00839 825 aaKnown RBP eCLIP17.99■□□□□ 0.47
KCNIP3-203ENST00000377181 CCDC18Q5T9S5 1454 aa17.99■□□□□ 0.47
KCNIP3-203ENST00000377181 CASKIN1Q8WXD9 1431 aa17.98■□□□□ 0.47
KCNIP3-203ENST00000377181 ANP32EQ9BTT0 268 aa17.96■□□□□ 0.47
KCNIP3-203ENST00000377181 CFAP43Q8NDM7 1665 aa17.96■□□□□ 0.47
KCNIP3-203ENST00000377181 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
KCNIP3-203ENST00000377181 TOPBP1Q92547 1522 aa17.96■□□□□ 0.46
KCNIP3-203ENST00000377181 RBM19Q9Y4C8 960 aaKnown RBP17.95■□□□□ 0.46
KCNIP3-203ENST00000377181 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
KCNIP3-203ENST00000377181 CCER2I3L3R5 266 aa17.94■□□□□ 0.46
KCNIP3-203ENST00000377181 TIMELESSQ9UNS1 1208 aa17.94■□□□□ 0.46
KCNIP3-203ENST00000377181 CCDC184Q52MB2 194 aa17.93■□□□□ 0.46
KCNIP3-203ENST00000377181 SENP3-EIF4A1A0A087X0R7 540 aa17.93■□□□□ 0.46
KCNIP3-203ENST00000377181 HSPA5P11021 654 aaKnown RBP17.92■□□□□ 0.46
KCNIP3-203ENST00000377181 ABCA10Q8WWZ4 1543 aa17.91■□□□□ 0.46
KCNIP3-203ENST00000377181 NAIPQ13075 1403 aa17.9■□□□□ 0.46
KCNIP3-203ENST00000377181 FMN1Q68DA7 1419 aa17.89■□□□□ 0.45
KCNIP3-203ENST00000377181 NCOA2Q15596 1464 aa17.89■□□□□ 0.45
KCNIP3-203ENST00000377181 WASHC2AQ641Q2 1341 aa17.89■□□□□ 0.45
KCNIP3-203ENST00000377181 SNAPC4Q5SXM2 1469 aa17.88■□□□□ 0.45
KCNIP3-203ENST00000377181 UACAQ9BZF9 1416 aa17.88■□□□□ 0.45
KCNIP3-203ENST00000377181 HFM1A2PYH4 1435 aa17.87■□□□□ 0.45
KCNIP3-203ENST00000377181 DNMBPQ6XZF7 1577 aa17.86■□□□□ 0.45
KCNIP3-203ENST00000377181 C11orf95C9JLR9 678 aaPredicted RBP17.85■□□□□ 0.45
KCNIP3-203ENST00000377181 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
KCNIP3-203ENST00000377181 MYOM3Q5VTT5 1437 aa17.84■□□□□ 0.45
KCNIP3-203ENST00000377181 PTPN23Q9H3S7 1636 aa17.84■□□□□ 0.45
KCNIP3-203ENST00000377181 EFCAB5A4FU69 1503 aa17.83■□□□□ 0.44
KCNIP3-203ENST00000377181 L3MBTL2Q969R5 705 aa17.82■□□□□ 0.44
KCNIP3-203ENST00000377181 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
KCNIP3-203ENST00000377181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.82■□□□□ 0.44
KCNIP3-203ENST00000377181 POLR3GLQ9BT43 218 aa17.81■□□□□ 0.44
KCNIP3-203ENST00000377181 MPHOSPH9Q99550 1183 aa17.79■□□□□ 0.44
KCNIP3-203ENST00000377181 MAGI3Q5TCQ9 1506 aa17.78■□□□□ 0.44
KCNIP3-203ENST00000377181 GAPVD1Q14C86 1478 aa17.78■□□□□ 0.44
KCNIP3-203ENST00000377181 EIF4G2P78344 907 aaKnown RBP eCLIP17.78■□□□□ 0.44
KCNIP3-203ENST00000377181 ZNF644Q9H582 1327 aaPredicted RBP17.77■□□□□ 0.44
KCNIP3-203ENST00000377181 LRRIQ1Q96JM4 1722 aa17.77■□□□□ 0.44
KCNIP3-203ENST00000377181 MSH5O43196 834 aa17.77■□□□□ 0.44
KCNIP3-203ENST00000377181 KDM5BQ9UGL1 1544 aa17.76■□□□□ 0.43
KCNIP3-203ENST00000377181 CTTNBP2Q8WZ74 1663 aa17.76■□□□□ 0.43
KCNIP3-203ENST00000377181 ZNF326Q5BKZ1 582 aaKnown RBP17.76■□□□□ 0.43
KCNIP3-203ENST00000377181 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
KCNIP3-203ENST00000377181 KDM6BO15054 1643 aa17.75■□□□□ 0.43
KCNIP3-203ENST00000377181 NBPF8Q3BBV2 869 aa17.75■□□□□ 0.43
KCNIP3-203ENST00000377181 DENND4BO75064 1496 aaPredicted RBP17.74■□□□□ 0.43
KCNIP3-203ENST00000377181 MRS2Q9HD23 443 aa17.73■□□□□ 0.43
KCNIP3-203ENST00000377181 CUL7Q14999 1698 aa17.72■□□□□ 0.43
KCNIP3-203ENST00000377181 CDK13Q14004 1512 aaKnown RBP17.72■□□□□ 0.43
KCNIP3-203ENST00000377181 PLEKHG5O94827 1062 aa17.72■□□□□ 0.43
KCNIP3-203ENST00000377181 B4GALNT3Q6L9W6 998 aa17.71■□□□□ 0.43
KCNIP3-203ENST00000377181 KIF21AQ7Z4S6 1674 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms