RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 MAGI1Q96QZ7 1491 aaPredicted RBP16.96■□□□□ 0.31
PDPN-203ENST00000376061 TNIKQ9UKE5 1360 aa16.96■□□□□ 0.3
PDPN-203ENST00000376061 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
PDPN-203ENST00000376061 CTTNBP2Q8WZ74 1663 aa16.93■□□□□ 0.3
PDPN-203ENST00000376061 UBTFP17480 764 aaKnown RBP16.9■□□□□ 0.3
PDPN-203ENST00000376061 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
PDPN-203ENST00000376061 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
PDPN-203ENST00000376061 GRIN2AQ12879 1464 aa16.86■□□□□ 0.29
PDPN-203ENST00000376061 CHD1O14646 1710 aa16.84■□□□□ 0.29
PDPN-203ENST00000376061 CEP170Q5SW79 1584 aa16.79■□□□□ 0.28
PDPN-203ENST00000376061 CLIP1P30622 1438 aa16.78■□□□□ 0.28
PDPN-203ENST00000376061 IQGAP2Q13576 1575 aa16.77■□□□□ 0.28
PDPN-203ENST00000376061 MAPK8IP2Q13387 824 aaPredicted RBP16.77■□□□□ 0.27
PDPN-203ENST00000376061 NUP160Q12769 1436 aa16.75■□□□□ 0.27
PDPN-203ENST00000376061 DMRT2Q9Y5R5 561 aa16.75■□□□□ 0.27
PDPN-203ENST00000376061 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
PDPN-203ENST00000376061 EFCAB5A4FU69 1503 aa16.72■□□□□ 0.27
PDPN-203ENST00000376061 ARHGAP35Q9NRY4 1499 aa16.72■□□□□ 0.27
PDPN-203ENST00000376061 KIAA0586Q9BVV6 1533 aa16.71■□□□□ 0.27
PDPN-203ENST00000376061 SAMD9Q5K651 1589 aa16.71■□□□□ 0.27
PDPN-203ENST00000376061 FBLN2P98095 1184 aa16.7■□□□□ 0.26
PDPN-203ENST00000376061 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
PDPN-203ENST00000376061 RANGAP1P46060 587 aaPredicted RBP16.68■□□□□ 0.26
PDPN-203ENST00000376061 UGGT2Q9NYU1 1516 aa16.68■□□□□ 0.26
PDPN-203ENST00000376061 CLASP1Q7Z460 1538 aa16.63■□□□□ 0.25
PDPN-203ENST00000376061 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
PDPN-203ENST00000376061 KIAA0556O60303 1618 aa16.61■□□□□ 0.25
PDPN-203ENST00000376061 SHROOM2Q13796 1616 aa16.6■□□□□ 0.25
PDPN-203ENST00000376061 FHOD3Q2V2M9 1422 aa16.59■□□□□ 0.25
PDPN-203ENST00000376061 DISP1Q96F81 1524 aa16.58■□□□□ 0.25
PDPN-203ENST00000376061 PCF11O94913 1555 aaKnown RBP16.55■□□□□ 0.24
PDPN-203ENST00000376061 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
PDPN-203ENST00000376061 P3H3Q8IVL6 736 aa16.52■□□□□ 0.24
PDPN-203ENST00000376061 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.23
PDPN-203ENST00000376061 JPH4Q96JJ6 628 aa16.5■□□□□ 0.23
PDPN-203ENST00000376061 FMN1Q68DA7 1419 aa16.49■□□□□ 0.23
PDPN-203ENST00000376061 FYCO1Q9BQS8 1478 aa16.49■□□□□ 0.23
PDPN-203ENST00000376061 CARMIL2Q6F5E8 1435 aa16.49■□□□□ 0.23
PDPN-203ENST00000376061 PRG4Q92954 1404 aaPredicted RBP16.48■□□□□ 0.23
PDPN-203ENST00000376061 ERCC6L2Q5T890 1561 aa16.46■□□□□ 0.23
PDPN-203ENST00000376061 CASKIN1Q8WXD9 1431 aa16.46■□□□□ 0.23
PDPN-203ENST00000376061 CFAP43Q8NDM7 1665 aa16.46■□□□□ 0.23
PDPN-203ENST00000376061 LRRIQ1Q96JM4 1722 aa16.45■□□□□ 0.22
PDPN-203ENST00000376061 HECW1Q76N89 1606 aa16.43■□□□□ 0.22
PDPN-203ENST00000376061 RAPGEF6Q8TEU7 1601 aa16.41■□□□□ 0.22
PDPN-203ENST00000376061 TIAM1Q13009 1591 aa16.41■□□□□ 0.22
PDPN-203ENST00000376061 MAP3K1Q13233 1512 aa16.4■□□□□ 0.22
PDPN-203ENST00000376061 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
PDPN-203ENST00000376061 ABCA8O94911 1581 aa16.38■□□□□ 0.21
PDPN-203ENST00000376061 PLB1Q6P1J6 1458 aa16.36■□□□□ 0.21
PDPN-203ENST00000376061 NUP153P49790 1475 aaKnown RBP16.34■□□□□ 0.21
PDPN-203ENST00000376061 CCDC18Q5T9S5 1454 aa16.34■□□□□ 0.21
PDPN-203ENST00000376061 PTPRGP23470 1445 aa16.33■□□□□ 0.2
PDPN-203ENST00000376061 APLP2Q06481 763 aa16.32■□□□□ 0.2
PDPN-203ENST00000376061 PPARGC1BQ86YN6 1023 aaKnown RBP16.32■□□□□ 0.2
PDPN-203ENST00000376061 TTBK1Q5TCY1 1321 aaPredicted RBP16.32■□□□□ 0.2
PDPN-203ENST00000376061 EPRSP07814 1512 aaKnown RBP16.32■□□□□ 0.2
PDPN-203ENST00000376061 CDK13Q14004 1512 aaKnown RBP16.31■□□□□ 0.2
PDPN-203ENST00000376061 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
PDPN-203ENST00000376061 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
PDPN-203ENST00000376061 ABCC2Q92887 1545 aa16.27■□□□□ 0.2
PDPN-203ENST00000376061 UACAQ9BZF9 1416 aa16.26■□□□□ 0.19
PDPN-203ENST00000376061 ARHGEF11O15085 1522 aa16.26■□□□□ 0.19
PDPN-203ENST00000376061 MAGI3Q5TCQ9 1506 aa16.26■□□□□ 0.19
PDPN-203ENST00000376061 EHBP1L1Q8N3D4 1523 aa16.26■□□□□ 0.19
PDPN-203ENST00000376061 KANK4Q5T7N3 995 aaPredicted RBP16.26■□□□□ 0.19
PDPN-203ENST00000376061 ADCY10Q96PN6 1610 aa16.22■□□□□ 0.19
PDPN-203ENST00000376061 UHRF1BP1LA0JNW5 1464 aa16.22■□□□□ 0.19
PDPN-203ENST00000376061 RIMBP3CA6NJZ7 1639 aa16.22■□□□□ 0.19
PDPN-203ENST00000376061 RIMBP3BA6NNM3 1639 aa16.22■□□□□ 0.19
PDPN-203ENST00000376061 RIMBP3Q9UFD9 1639 aa16.22■□□□□ 0.19
PDPN-203ENST00000376061 SUPT6HQ7KZ85 1726 aaKnown RBP16.2■□□□□ 0.18
PDPN-203ENST00000376061 ATP10BO94823 1461 aa16.2■□□□□ 0.18
PDPN-203ENST00000376061 ZCCHC11Q5TAX3 1644 aaKnown RBP16.2■□□□□ 0.18
PDPN-203ENST00000376061 MTUS2Q5JR59 1369 aa16.19■□□□□ 0.18
PDPN-203ENST00000376061 ARID3CA6NKF2 412 aa16.19■□□□□ 0.18
PDPN-203ENST00000376061 KDM5BQ9UGL1 1544 aa16.16■□□□□ 0.18
PDPN-203ENST00000376061 TRIM26Q12899 539 aaPredicted RBP16.15■□□□□ 0.18
PDPN-203ENST00000376061 TROQ12816 1431 aaPredicted RBP16.14■□□□□ 0.17
PDPN-203ENST00000376061 NCOA2Q15596 1464 aa16.14■□□□□ 0.17
PDPN-203ENST00000376061 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
PDPN-203ENST00000376061 KIF14Q15058 1648 aa16.13■□□□□ 0.17
PDPN-203ENST00000376061 PHLDB1Q86UU1 1377 aa16.11■□□□□ 0.17
PDPN-203ENST00000376061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.1■□□□□ 0.17
PDPN-203ENST00000376061 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
PDPN-203ENST00000376061 CDK11AQ9UQ88 783 aaPredicted RBP16.09■□□□□ 0.17
PDPN-203ENST00000376061 RRBP1Q9P2E9 1410 aaKnown RBP16.09■□□□□ 0.17
PDPN-203ENST00000376061 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
PDPN-203ENST00000376061 ITSN2Q9NZM3 1697 aa16.06■□□□□ 0.16
PDPN-203ENST00000376061 MYOM3Q5VTT5 1437 aa16.05■□□□□ 0.16
PDPN-203ENST00000376061 CDC42BPAQ5VT25 1732 aa16.04■□□□□ 0.16
PDPN-203ENST00000376061 ABCC10Q5T3U5 1492 aa16.03■□□□□ 0.16
PDPN-203ENST00000376061 FGD6Q6ZV73 1430 aa16.03■□□□□ 0.16
PDPN-203ENST00000376061 CCNB3Q8WWL7 1395 aa16.03■□□□□ 0.16
PDPN-203ENST00000376061 PLEKHD1A6NEE1 506 aa16.02■□□□□ 0.16
PDPN-203ENST00000376061 TTC37Q6PGP7 1564 aa16.02■□□□□ 0.15
PDPN-203ENST00000376061 WDR7Q9Y4E6 1490 aa16.01■□□□□ 0.15
PDPN-203ENST00000376061 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
PDPN-203ENST00000376061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.99■□□□□ 0.15
PDPN-203ENST00000376061 PREX2Q70Z35 1606 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms