RNA–Protein interactions for RNA: ENST00000374945.1

LINC01993-201, Transcript of long intergenic non-protein coding RNA 1993, humanhuman

TSL 2 BASIC

Gene LINC01993, Length 2,934 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01993-201ENST00000374945 P3H3Q8IVL6 736 aa19.08■□□□□ 0.64
LINC01993-201ENST00000374945 KIF21AQ7Z4S6 1674 aa19.07■□□□□ 0.64
LINC01993-201ENST00000374945 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
LINC01993-201ENST00000374945 KANK4Q5T7N3 995 aaPredicted RBP19.03■□□□□ 0.64
LINC01993-201ENST00000374945 ARHGAP35Q9NRY4 1499 aa19.01■□□□□ 0.63
LINC01993-201ENST00000374945 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
LINC01993-201ENST00000374945 TSHZ2Q9NRE2 1034 aa18.98■□□□□ 0.63
LINC01993-201ENST00000374945 ATP1B4Q9UN42 357 aaPredicted RBP18.95■□□□□ 0.62
LINC01993-201ENST00000374945 ANP32EQ9BTT0 268 aa18.94■□□□□ 0.62
LINC01993-201ENST00000374945 DHX57Q6P158 1386 aaKnown RBP18.9■□□□□ 0.62
LINC01993-201ENST00000374945 GAPVD1Q14C86 1478 aa18.87■□□□□ 0.61
LINC01993-201ENST00000374945 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.61
LINC01993-201ENST00000374945 FHOD3Q2V2M9 1422 aa18.85■□□□□ 0.61
LINC01993-201ENST00000374945 WDR97A6NE52 1622 aa18.84■□□□□ 0.61
LINC01993-201ENST00000374945 ITGAEP38570 1179 aa18.82■□□□□ 0.6
LINC01993-201ENST00000374945 ABCA5Q8WWZ7 1642 aa18.8■□□□□ 0.6
LINC01993-201ENST00000374945 BCL11AQ9H165 835 aa18.79■□□□□ 0.6
LINC01993-201ENST00000374945 TARBP1Q13395 1621 aaKnown RBP18.79■□□□□ 0.6
LINC01993-201ENST00000374945 MRC2Q9UBG0 1479 aa18.79■□□□□ 0.6
LINC01993-201ENST00000374945 ZNF608Q9ULD9 1512 aaPredicted RBP18.77■□□□□ 0.59
LINC01993-201ENST00000374945 ERCC6Q03468 1493 aa18.76■□□□□ 0.59
LINC01993-201ENST00000374945 CUL7Q14999 1698 aa18.76■□□□□ 0.59
LINC01993-201ENST00000374945 PCF11O94913 1555 aaKnown RBP18.71■□□□□ 0.59
LINC01993-201ENST00000374945 CTTNBP2Q8WZ74 1663 aa18.69■□□□□ 0.58
LINC01993-201ENST00000374945 ARID3CA6NKF2 412 aa18.68■□□□□ 0.58
LINC01993-201ENST00000374945 KCNH8Q96L42 1107 aa18.67■□□□□ 0.58
LINC01993-201ENST00000374945 TIAM1Q13009 1591 aa18.66■□□□□ 0.58
LINC01993-201ENST00000374945 RRBP1Q9P2E9 1410 aaKnown RBP18.65■□□□□ 0.58
LINC01993-201ENST00000374945 PBRM1Q86U86 1689 aa18.64■□□□□ 0.58
LINC01993-201ENST00000374945 FHAD1B1AJZ9 1412 aa18.63■□□□□ 0.57
LINC01993-201ENST00000374945 FBLN2P98095 1184 aa18.62■□□□□ 0.57
LINC01993-201ENST00000374945 PHLDB1Q86UU1 1377 aa18.62■□□□□ 0.57
LINC01993-201ENST00000374945 WDR62O43379 1518 aa18.62■□□□□ 0.57
LINC01993-201ENST00000374945 CCNB3Q8WWL7 1395 aa18.61■□□□□ 0.57
LINC01993-201ENST00000374945 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
LINC01993-201ENST00000374945 FAM50AQ14320 339 aaKnown RBP18.61■□□□□ 0.57
LINC01993-201ENST00000374945 BCANQ96GW7 911 aa18.6■□□□□ 0.57
LINC01993-201ENST00000374945 GRIN2BQ13224 1484 aa18.58■□□□□ 0.57
LINC01993-201ENST00000374945 PRKCSHP14314 528 aaPredicted RBP18.58■□□□□ 0.56
LINC01993-201ENST00000374945 IFT140Q96RY7 1462 aa18.58■□□□□ 0.56
LINC01993-201ENST00000374945 EFCAB5A4FU69 1503 aa18.57■□□□□ 0.56
LINC01993-201ENST00000374945 ADAMTS12P58397 1594 aa18.56■□□□□ 0.56
LINC01993-201ENST00000374945 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
LINC01993-201ENST00000374945 FKBP8Q14318 412 aa18.55■□□□□ 0.56
LINC01993-201ENST00000374945 MAPKBP1O60336 1514 aa18.55■□□□□ 0.56
LINC01993-201ENST00000374945 CASKIN1Q8WXD9 1431 aa18.54■□□□□ 0.56
LINC01993-201ENST00000374945 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
LINC01993-201ENST00000374945 FMN1Q68DA7 1419 aa18.53■□□□□ 0.56
LINC01993-201ENST00000374945 THOC2Q8NI27 1593 aaKnown RBP18.53■□□□□ 0.56
LINC01993-201ENST00000374945 FYCO1Q9BQS8 1478 aa18.52■□□□□ 0.56
LINC01993-201ENST00000374945 RBM19Q9Y4C8 960 aaKnown RBP18.52■□□□□ 0.55
LINC01993-201ENST00000374945 SAMD9Q5K651 1589 aa18.51■□□□□ 0.55
LINC01993-201ENST00000374945 CFAP43Q8NDM7 1665 aa18.5■□□□□ 0.55
LINC01993-201ENST00000374945 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
LINC01993-201ENST00000374945 MTUS2Q5JR59 1369 aa18.48■□□□□ 0.55
LINC01993-201ENST00000374945 IQGAP2Q13576 1575 aa18.48■□□□□ 0.55
LINC01993-201ENST00000374945 LRRIQ1Q96JM4 1722 aa18.48■□□□□ 0.55
LINC01993-201ENST00000374945 MAP3K1Q13233 1512 aa18.47■□□□□ 0.55
LINC01993-201ENST00000374945 RAB3GAP2Q9H2M9 1393 aa18.43■□□□□ 0.54
LINC01993-201ENST00000374945 GRIN2AQ12879 1464 aa18.41■□□□□ 0.54
LINC01993-201ENST00000374945 CDK13Q14004 1512 aaKnown RBP18.39■□□□□ 0.53
LINC01993-201ENST00000374945 MSH5O43196 834 aa18.39■□□□□ 0.53
LINC01993-201ENST00000374945 PPP1R15AO75807 674 aaPredicted RBP18.39■□□□□ 0.53
LINC01993-201ENST00000374945 DDX10Q13206 875 aaKnown RBP18.39■□□□□ 0.53
LINC01993-201ENST00000374945 MAGI3Q5TCQ9 1506 aa18.38■□□□□ 0.53
LINC01993-201ENST00000374945 NEFLP07196 543 aa18.36■□□□□ 0.53
LINC01993-201ENST00000374945 KIAA0586Q9BVV6 1533 aa18.34■□□□□ 0.53
LINC01993-201ENST00000374945 NCOA2Q15596 1464 aa18.34■□□□□ 0.53
LINC01993-201ENST00000374945 DISP1Q96F81 1524 aa18.33■□□□□ 0.53
LINC01993-201ENST00000374945 FGD6Q6ZV73 1430 aa18.33■□□□□ 0.52
LINC01993-201ENST00000374945 CEP170Q5SW79 1584 aa18.32■□□□□ 0.52
LINC01993-201ENST00000374945 CCER2I3L3R5 266 aa18.32■□□□□ 0.52
LINC01993-201ENST00000374945 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
LINC01993-201ENST00000374945 MAGI1Q96QZ7 1491 aaPredicted RBP18.3■□□□□ 0.52
LINC01993-201ENST00000374945 SETD5Q9C0A6 1442 aa18.3■□□□□ 0.52
LINC01993-201ENST00000374945 EPRSP07814 1512 aaKnown RBP18.3■□□□□ 0.52
LINC01993-201ENST00000374945 UGGT2Q9NYU1 1516 aa18.3■□□□□ 0.52
LINC01993-201ENST00000374945 CHIC2Q9UKJ5 165 aa18.29■□□□□ 0.52
LINC01993-201ENST00000374945 TRIM52Q96A61 297 aa18.29■□□□□ 0.52
LINC01993-201ENST00000374945 PTPRKQ15262 1439 aa18.28■□□□□ 0.52
LINC01993-201ENST00000374945 JPH4Q96JJ6 628 aa18.28■□□□□ 0.52
LINC01993-201ENST00000374945 KIAA0556O60303 1618 aa18.28■□□□□ 0.52
LINC01993-201ENST00000374945 SIN3AQ96ST3 1273 aa18.26■□□□□ 0.51
LINC01993-201ENST00000374945 FANCIQ9NVI1 1328 aa18.26■□□□□ 0.51
LINC01993-201ENST00000374945 HECW1Q76N89 1606 aa18.26■□□□□ 0.51
LINC01993-201ENST00000374945 MYOM3Q5VTT5 1437 aa18.25■□□□□ 0.51
LINC01993-201ENST00000374945 PLB1Q6P1J6 1458 aa18.25■□□□□ 0.51
LINC01993-201ENST00000374945 EHBP1L1Q8N3D4 1523 aa18.23■□□□□ 0.51
LINC01993-201ENST00000374945 SUPT6HQ7KZ85 1726 aaKnown RBP18.23■□□□□ 0.51
LINC01993-201ENST00000374945 RRP7BPQ9NSQ0 103 aa18.22■□□□□ 0.51
LINC01993-201ENST00000374945 NUP153P49790 1475 aaKnown RBP18.22■□□□□ 0.51
LINC01993-201ENST00000374945 CCDC18Q5T9S5 1454 aa18.21■□□□□ 0.51
LINC01993-201ENST00000374945 ANP32CO43423 234 aa18.2■□□□□ 0.5
LINC01993-201ENST00000374945 TIMELESSQ9UNS1 1208 aa18.2■□□□□ 0.5
LINC01993-201ENST00000374945 ZNF644Q9H582 1327 aaPredicted RBP18.2■□□□□ 0.5
LINC01993-201ENST00000374945 HIRIP3Q9BW71 556 aaPredicted RBP18.18■□□□□ 0.5
LINC01993-201ENST00000374945 NUP160Q12769 1436 aa18.18■□□□□ 0.5
LINC01993-201ENST00000374945 PRG4Q92954 1404 aaPredicted RBP18.16■□□□□ 0.5
LINC01993-201ENST00000374945 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
LINC01993-201ENST00000374945 RAPGEF6Q8TEU7 1601 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms