RNA–Protein interactions for RNA: ENST00000374724.1

SLC44A1-203, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SLC44A1, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-203ENST00000374724 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
SLC44A1-203ENST00000374724 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
SLC44A1-203ENST00000374724 KIF21AQ7Z4S6 1674 aa24.04■■□□□ 1.44
SLC44A1-203ENST00000374724 PDS5BQ9NTI5 1447 aa24.04■■□□□ 1.44
SLC44A1-203ENST00000374724 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
SLC44A1-203ENST00000374724 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
SLC44A1-203ENST00000374724 FAM50AQ14320 339 aaKnown RBP23.99■■□□□ 1.43
SLC44A1-203ENST00000374724 POLA1P09884 1462 aaPredicted RBP23.99■■□□□ 1.43
SLC44A1-203ENST00000374724 RAB3GAP2Q9H2M9 1393 aa23.98■■□□□ 1.43
SLC44A1-203ENST00000374724 TIAM1Q13009 1591 aa23.97■■□□□ 1.43
SLC44A1-203ENST00000374724 PHLDB1Q86UU1 1377 aa23.95■■□□□ 1.42
SLC44A1-203ENST00000374724 LRRC9Q6ZRR7 1453 aa23.94■■□□□ 1.42
SLC44A1-203ENST00000374724 FHOD3Q2V2M9 1422 aa23.9■■□□□ 1.42
SLC44A1-203ENST00000374724 FHAD1B1AJZ9 1412 aa23.9■■□□□ 1.42
SLC44A1-203ENST00000374724 MYT1Q01538 1121 aa23.88■■□□□ 1.41
SLC44A1-203ENST00000374724 MAP3K1Q13233 1512 aa23.88■■□□□ 1.41
SLC44A1-203ENST00000374724 SETD5Q9C0A6 1442 aa23.85■■□□□ 1.41
SLC44A1-203ENST00000374724 TDRD9Q8NDG6 1382 aaKnown RBP23.84■■□□□ 1.41
SLC44A1-203ENST00000374724 PCF11O94913 1555 aaKnown RBP23.82■■□□□ 1.4
SLC44A1-203ENST00000374724 SIN3AQ96ST3 1273 aa23.82■■□□□ 1.4
SLC44A1-203ENST00000374724 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
SLC44A1-203ENST00000374724 MAPKBP1O60336 1514 aa23.8■■□□□ 1.4
SLC44A1-203ENST00000374724 MRC2Q9UBG0 1479 aa23.73■■□□□ 1.39
SLC44A1-203ENST00000374724 ERCC6Q03468 1493 aa23.73■■□□□ 1.39
SLC44A1-203ENST00000374724 CASKIN1Q8WXD9 1431 aa23.7■■□□□ 1.38
SLC44A1-203ENST00000374724 CFAP43Q8NDM7 1665 aa23.69■■□□□ 1.38
SLC44A1-203ENST00000374724 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
SLC44A1-203ENST00000374724 WDR97A6NE52 1622 aa23.68■■□□□ 1.38
SLC44A1-203ENST00000374724 EFCAB5A4FU69 1503 aa23.66■■□□□ 1.38
SLC44A1-203ENST00000374724 KCNH8Q96L42 1107 aa23.65■■□□□ 1.38
SLC44A1-203ENST00000374724 GAPVD1Q14C86 1478 aa23.64■■□□□ 1.38
SLC44A1-203ENST00000374724 TARBP1Q13395 1621 aaKnown RBP23.63■■□□□ 1.37
SLC44A1-203ENST00000374724 CUL7Q14999 1698 aa23.63■■□□□ 1.37
SLC44A1-203ENST00000374724 MTUS2Q5JR59 1369 aa23.63■■□□□ 1.37
SLC44A1-203ENST00000374724 HIRIP3Q9BW71 556 aaPredicted RBP23.63■■□□□ 1.37
SLC44A1-203ENST00000374724 FMN1Q68DA7 1419 aa23.62■■□□□ 1.37
SLC44A1-203ENST00000374724 AQRO60306 1485 aaKnown RBP eCLIP23.62■■□□□ 1.37
SLC44A1-203ENST00000374724 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
SLC44A1-203ENST00000374724 ABCA5Q8WWZ7 1642 aa23.6■■□□□ 1.37
SLC44A1-203ENST00000374724 CTTNBP2Q8WZ74 1663 aa23.57■■□□□ 1.36
SLC44A1-203ENST00000374724 FGD6Q6ZV73 1430 aa23.57■■□□□ 1.36
SLC44A1-203ENST00000374724 ZNF608Q9ULD9 1512 aaPredicted RBP23.56■■□□□ 1.36
SLC44A1-203ENST00000374724 WDR62O43379 1518 aa23.55■■□□□ 1.36
SLC44A1-203ENST00000374724 SNAPC4Q5SXM2 1469 aa23.55■■□□□ 1.36
SLC44A1-203ENST00000374724 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.52■■□□□ 1.36
SLC44A1-203ENST00000374724 PPP1R15AO75807 674 aaPredicted RBP23.52■■□□□ 1.36
SLC44A1-203ENST00000374724 PTPRKQ15262 1439 aa23.5■■□□□ 1.35
SLC44A1-203ENST00000374724 TIMELESSQ9UNS1 1208 aa23.49■■□□□ 1.35
SLC44A1-203ENST00000374724 SUPT16HQ9Y5B9 1047 aaKnown RBP23.49■■□□□ 1.35
SLC44A1-203ENST00000374724 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
SLC44A1-203ENST00000374724 BCANQ96GW7 911 aa23.46■■□□□ 1.35
SLC44A1-203ENST00000374724 NCOA2Q15596 1464 aa23.45■■□□□ 1.34
SLC44A1-203ENST00000374724 CCDC18Q5T9S5 1454 aa23.44■■□□□ 1.34
SLC44A1-203ENST00000374724 ARID3CA6NKF2 412 aa23.44■■□□□ 1.34
SLC44A1-203ENST00000374724 IFT140Q96RY7 1462 aa23.44■■□□□ 1.34
SLC44A1-203ENST00000374724 PBRM1Q86U86 1689 aa23.43■■□□□ 1.34
SLC44A1-203ENST00000374724 TONSLQ96HA7 1378 aa23.43■■□□□ 1.34
SLC44A1-203ENST00000374724 SAMD9Q5K651 1589 aa23.42■■□□□ 1.34
SLC44A1-203ENST00000374724 CHIC2Q9UKJ5 165 aa23.42■■□□□ 1.34
SLC44A1-203ENST00000374724 GRIN2BQ13224 1484 aa23.41■■□□□ 1.34
SLC44A1-203ENST00000374724 MYOM3Q5VTT5 1437 aa23.4■■□□□ 1.34
SLC44A1-203ENST00000374724 HFM1A2PYH4 1435 aa23.39■■□□□ 1.34
SLC44A1-203ENST00000374724 RRP7BPQ9NSQ0 103 aa23.39■■□□□ 1.34
SLC44A1-203ENST00000374724 LRRIQ1Q96JM4 1722 aa23.38■■□□□ 1.33
SLC44A1-203ENST00000374724 NAIPQ13075 1403 aa23.36■■□□□ 1.33
SLC44A1-203ENST00000374724 UACAQ9BZF9 1416 aa23.36■■□□□ 1.33
SLC44A1-203ENST00000374724 EIF4G3O43432 1585 aaKnown RBP23.33■■□□□ 1.33
SLC44A1-203ENST00000374724 PTPN23Q9H3S7 1636 aa23.33■■□□□ 1.32
SLC44A1-203ENST00000374724 MAGI3Q5TCQ9 1506 aa23.3■■□□□ 1.32
SLC44A1-203ENST00000374724 TRIM52Q96A61 297 aa23.3■■□□□ 1.32
SLC44A1-203ENST00000374724 ADAMTS12P58397 1594 aa23.3■■□□□ 1.32
SLC44A1-203ENST00000374724 ANP32CO43423 234 aa23.29■■□□□ 1.32
SLC44A1-203ENST00000374724 SUPT6HQ7KZ85 1726 aaKnown RBP23.29■■□□□ 1.32
SLC44A1-203ENST00000374724 TSHZ2Q9NRE2 1034 aa23.29■■□□□ 1.32
SLC44A1-203ENST00000374724 EHBP1L1Q8N3D4 1523 aa23.29■■□□□ 1.32
SLC44A1-203ENST00000374724 FBLN2P98095 1184 aa23.29■■□□□ 1.32
SLC44A1-203ENST00000374724 UGGT2Q9NYU1 1516 aa23.25■■□□□ 1.31
SLC44A1-203ENST00000374724 CDK13Q14004 1512 aaKnown RBP23.2■■□□□ 1.3
SLC44A1-203ENST00000374724 EPRSP07814 1512 aaKnown RBP23.2■■□□□ 1.3
SLC44A1-203ENST00000374724 ARHGEF11O15085 1522 aa23.18■■□□□ 1.3
SLC44A1-203ENST00000374724 IQGAP2Q13576 1575 aa23.18■■□□□ 1.3
SLC44A1-203ENST00000374724 CCER2I3L3R5 266 aa23.18■■□□□ 1.3
SLC44A1-203ENST00000374724 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
SLC44A1-203ENST00000374724 FOXD1Q16676 465 aa23.17■■□□□ 1.3
SLC44A1-203ENST00000374724 FKBP8Q14318 412 aa23.17■■□□□ 1.3
SLC44A1-203ENST00000374724 HECW1Q76N89 1606 aa23.15■■□□□ 1.3
SLC44A1-203ENST00000374724 MPHOSPH9Q99550 1183 aa23.13■■□□□ 1.29
SLC44A1-203ENST00000374724 ANP32EQ9BTT0 268 aa23.12■■□□□ 1.29
SLC44A1-203ENST00000374724 GRIN2AQ12879 1464 aa23.12■■□□□ 1.29
SLC44A1-203ENST00000374724 TCOF1Q13428 1488 aaKnown RBP23.12■■□□□ 1.29
SLC44A1-203ENST00000374724 HSPA5P11021 654 aaKnown RBP23.1■■□□□ 1.29
SLC44A1-203ENST00000374724 KDM6BO15054 1643 aa23.1■■□□□ 1.29
SLC44A1-203ENST00000374724 DENND4BO75064 1496 aaPredicted RBP23.09■■□□□ 1.29
SLC44A1-203ENST00000374724 ZNF644Q9H582 1327 aaPredicted RBP23.09■■□□□ 1.29
SLC44A1-203ENST00000374724 KDM5BQ9UGL1 1544 aa23.09■■□□□ 1.29
SLC44A1-203ENST00000374724 MAGI1Q96QZ7 1491 aaPredicted RBP23.07■■□□□ 1.28
SLC44A1-203ENST00000374724 MIA2Q96PC5 1412 aa23.06■■□□□ 1.28
SLC44A1-203ENST00000374724 L3MBTL2Q969R5 705 aa23.06■■□□□ 1.28
SLC44A1-203ENST00000374724 BCL11AQ9H165 835 aa23.05■■□□□ 1.28
SLC44A1-203ENST00000374724 SYNJ2O15056 1496 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms