RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 ERICH3Q5RHP9 1530 aa21.25■□□□□ 0.99
HMGCL-203ENST00000374490 CCER1Q8TC90 406 aaPredicted RBP21.25■□□□□ 0.99
HMGCL-203ENST00000374490 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
HMGCL-203ENST00000374490 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
HMGCL-203ENST00000374490 RAPGEF2Q9Y4G8 1499 aa21.21■□□□□ 0.99
HMGCL-203ENST00000374490 ABCA10Q8WWZ4 1543 aa21.2■□□□□ 0.98
HMGCL-203ENST00000374490 SYNJ2O15056 1496 aa21.17■□□□□ 0.98
HMGCL-203ENST00000374490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.17■□□□□ 0.98
HMGCL-203ENST00000374490 CLASP1Q7Z460 1538 aa21.17■□□□□ 0.98
HMGCL-203ENST00000374490 PRXQ9BXM0 1461 aa21.17■□□□□ 0.98
HMGCL-203ENST00000374490 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.97
HMGCL-203ENST00000374490 APLP2Q06481 763 aa21.07■□□□□ 0.96
HMGCL-203ENST00000374490 IGF1RP08069 1367 aa21.07■□□□□ 0.96
HMGCL-203ENST00000374490 TTBK1Q5TCY1 1321 aaPredicted RBP21.06■□□□□ 0.96
HMGCL-203ENST00000374490 ABCA5Q8WWZ7 1642 aa21.04■□□□□ 0.96
HMGCL-203ENST00000374490 CUL7Q14999 1698 aa21.02■□□□□ 0.96
HMGCL-203ENST00000374490 CARMIL1Q5VZK9 1371 aa21.01■□□□□ 0.95
HMGCL-203ENST00000374490 PBRM1Q86U86 1689 aa21■□□□□ 0.95
HMGCL-203ENST00000374490 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
HMGCL-203ENST00000374490 FHAD1B1AJZ9 1412 aa20.89■□□□□ 0.93
HMGCL-203ENST00000374490 NUP160Q12769 1436 aa20.89■□□□□ 0.93
HMGCL-203ENST00000374490 ADAMTS12P58397 1594 aa20.88■□□□□ 0.93
HMGCL-203ENST00000374490 RANGAP1P46060 587 aaPredicted RBP20.84■□□□□ 0.93
HMGCL-203ENST00000374490 CEP170Q5SW79 1584 aa20.82■□□□□ 0.92
HMGCL-203ENST00000374490 HNRNPUL2Q1KMD3 747 aaKnown RBP20.81■□□□□ 0.92
HMGCL-203ENST00000374490 CTTNBP2Q8WZ74 1663 aa20.81■□□□□ 0.92
HMGCL-203ENST00000374490 ERCC6L2Q5T890 1561 aa20.8■□□□□ 0.92
HMGCL-203ENST00000374490 ARHGAP35Q9NRY4 1499 aa20.78■□□□□ 0.92
HMGCL-203ENST00000374490 DIEXFQ68CQ4 756 aaKnown RBP20.76■□□□□ 0.91
HMGCL-203ENST00000374490 CLSPNQ9HAW4 1339 aa20.75■□□□□ 0.91
HMGCL-203ENST00000374490 AEBP2Q6ZN18 517 aaPredicted RBP20.75■□□□□ 0.91
HMGCL-203ENST00000374490 RRBP1Q9P2E9 1410 aaKnown RBP20.74■□□□□ 0.91
HMGCL-203ENST00000374490 MAP3K1Q13233 1512 aa20.74■□□□□ 0.91
HMGCL-203ENST00000374490 ZNF316A6NFI3 1004 aaPredicted RBP20.73■□□□□ 0.91
HMGCL-203ENST00000374490 SHROOM2Q13796 1616 aa20.72■□□□□ 0.91
HMGCL-203ENST00000374490 PRG4Q92954 1404 aaPredicted RBP20.72■□□□□ 0.91
HMGCL-203ENST00000374490 JPH4Q96JJ6 628 aa20.71■□□□□ 0.91
HMGCL-203ENST00000374490 EFCAB5A4FU69 1503 aa20.66■□□□□ 0.9
HMGCL-203ENST00000374490 KANK4Q5T7N3 995 aaPredicted RBP20.64■□□□□ 0.9
HMGCL-203ENST00000374490 TIAM1Q13009 1591 aa20.6■□□□□ 0.89
HMGCL-203ENST00000374490 NPM1P06748 294 aaKnown RBP eCLIP20.6■□□□□ 0.89
HMGCL-203ENST00000374490 CCNB3Q8WWL7 1395 aa20.6■□□□□ 0.89
HMGCL-203ENST00000374490 CENPBP07199 599 aaPredicted RBP20.57■□□□□ 0.88
HMGCL-203ENST00000374490 DHX57Q6P158 1386 aaKnown RBP20.57■□□□□ 0.88
HMGCL-203ENST00000374490 IQGAP2Q13576 1575 aa20.57■□□□□ 0.88
HMGCL-203ENST00000374490 SAMD9Q5K651 1589 aa20.54■□□□□ 0.88
HMGCL-203ENST00000374490 ACIN1Q9UKV3 1341 aaKnown RBP20.54■□□□□ 0.88
HMGCL-203ENST00000374490 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
HMGCL-203ENST00000374490 KIAA0586Q9BVV6 1533 aa20.53■□□□□ 0.88
HMGCL-203ENST00000374490 FAM69CQ0P6D2 419 aa20.53■□□□□ 0.88
HMGCL-203ENST00000374490 CFAP43Q8NDM7 1665 aa20.52■□□□□ 0.87
HMGCL-203ENST00000374490 FHOD3Q2V2M9 1422 aa20.51■□□□□ 0.87
HMGCL-203ENST00000374490 LRRC9Q6ZRR7 1453 aa20.5■□□□□ 0.87
HMGCL-203ENST00000374490 P3H3Q8IVL6 736 aa20.49■□□□□ 0.87
HMGCL-203ENST00000374490 ABCC10Q5T3U5 1492 aa20.48■□□□□ 0.87
HMGCL-203ENST00000374490 PCF11O94913 1555 aaKnown RBP20.47■□□□□ 0.87
HMGCL-203ENST00000374490 FMN1Q68DA7 1419 aa20.46■□□□□ 0.87
HMGCL-203ENST00000374490 FYCO1Q9BQS8 1478 aa20.46■□□□□ 0.87
HMGCL-203ENST00000374490 MAPKBP1O60336 1514 aa20.46■□□□□ 0.87
HMGCL-203ENST00000374490 UGGT2Q9NYU1 1516 aa20.43■□□□□ 0.86
HMGCL-203ENST00000374490 KIF13AQ9H1H9 1805 aa20.42■□□□□ 0.86
HMGCL-203ENST00000374490 CASKIN1Q8WXD9 1431 aa20.41■□□□□ 0.86
HMGCL-203ENST00000374490 ADCY10Q96PN6 1610 aa20.4■□□□□ 0.86
HMGCL-203ENST00000374490 PTPRGP23470 1445 aa20.4■□□□□ 0.86
HMGCL-203ENST00000374490 NEUROD1Q13562 356 aa20.38■□□□□ 0.85
HMGCL-203ENST00000374490 CARMIL2Q6F5E8 1435 aa20.37■□□□□ 0.85
HMGCL-203ENST00000374490 DIP2BQ9P265 1576 aa20.37■□□□□ 0.85
HMGCL-203ENST00000374490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.36■□□□□ 0.85
HMGCL-203ENST00000374490 KIAA0556O60303 1618 aa20.35■□□□□ 0.85
HMGCL-203ENST00000374490 ATP1B4Q9UN42 357 aaPredicted RBP20.34■□□□□ 0.85
HMGCL-203ENST00000374490 PHLDB1Q86UU1 1377 aa20.34■□□□□ 0.85
HMGCL-203ENST00000374490 SETD5Q9C0A6 1442 aa20.33■□□□□ 0.85
HMGCL-203ENST00000374490 PELP1Q8IZL8 1130 aaKnown RBP20.32■□□□□ 0.84
HMGCL-203ENST00000374490 RAB3GAP2Q9H2M9 1393 aa20.32■□□□□ 0.84
HMGCL-203ENST00000374490 DISP1Q96F81 1524 aa20.29■□□□□ 0.84
HMGCL-203ENST00000374490 HECW1Q76N89 1606 aa20.28■□□□□ 0.84
HMGCL-203ENST00000374490 ABCC2Q92887 1545 aa20.28■□□□□ 0.84
HMGCL-203ENST00000374490 MIER1Q8N108 512 aa20.25■□□□□ 0.83
HMGCL-203ENST00000374490 KDM6BO15054 1643 aa20.25■□□□□ 0.83
HMGCL-203ENST00000374490 ITGAEP38570 1179 aa20.24■□□□□ 0.83
HMGCL-203ENST00000374490 LRRIQ1Q96JM4 1722 aa20.23■□□□□ 0.83
HMGCL-203ENST00000374490 PLB1Q6P1J6 1458 aa20.23■□□□□ 0.83
HMGCL-203ENST00000374490 UACAQ9BZF9 1416 aa20.23■□□□□ 0.83
HMGCL-203ENST00000374490 CCDC18Q5T9S5 1454 aa20.22■□□□□ 0.83
HMGCL-203ENST00000374490 ASXL2Q76L83 1435 aa20.22■□□□□ 0.83
HMGCL-203ENST00000374490 UHRF1BP1LA0JNW5 1464 aa20.21■□□□□ 0.83
HMGCL-203ENST00000374490 FAM50AQ14320 339 aaKnown RBP20.2■□□□□ 0.82
HMGCL-203ENST00000374490 TIMELESSQ9UNS1 1208 aa20.17■□□□□ 0.82
HMGCL-203ENST00000374490 GTF3C3Q9Y5Q9 886 aa20.17■□□□□ 0.82
HMGCL-203ENST00000374490 FGD6Q6ZV73 1430 aa20.17■□□□□ 0.82
HMGCL-203ENST00000374490 RAPGEF6Q8TEU7 1601 aa20.17■□□□□ 0.82
HMGCL-203ENST00000374490 MTUS2Q5JR59 1369 aa20.15■□□□□ 0.82
HMGCL-203ENST00000374490 KDM4FA0A1W2PPD8 638 aa20.15■□□□□ 0.82
HMGCL-203ENST00000374490 EHBP1L1Q8N3D4 1523 aa20.15■□□□□ 0.82
HMGCL-203ENST00000374490 GLI2P10070 1586 aa20.14■□□□□ 0.81
HMGCL-203ENST00000374490 EPRSP07814 1512 aaKnown RBP20.14■□□□□ 0.81
HMGCL-203ENST00000374490 TSPOAP1O95153 1857 aa20.14■□□□□ 0.81
HMGCL-203ENST00000374490 KDM5BQ9UGL1 1544 aa20.11■□□□□ 0.81
HMGCL-203ENST00000374490 SUPT6HQ7KZ85 1726 aaKnown RBP20.1■□□□□ 0.81
HMGCL-203ENST00000374490 CDK13Q14004 1512 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms