RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 PDS5BQ9NTI5 1447 aa11.03□□□□□ -0.64
HERC4-202ENST00000373700 SYNJ1O43426 1573 aa11.02□□□□□ -0.64
HERC4-202ENST00000373700 VPS8Q8N3P4 1428 aa11.02□□□□□ -0.65
HERC4-202ENST00000373700 ERICH6Q7L0X2 663 aa11.01□□□□□ -0.65
HERC4-202ENST00000373700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11□□□□□ -0.65
HERC4-202ENST00000373700 SIN3AQ96ST3 1273 aa11□□□□□ -0.65
HERC4-202ENST00000373700 ANP32CO43423 234 aa11□□□□□ -0.65
HERC4-202ENST00000373700 CC2D2AQ9P2K1 1620 aa11□□□□□ -0.65
HERC4-202ENST00000373700 FGD5Q6ZNL6 1462 aa10.99□□□□□ -0.65
HERC4-202ENST00000373700 FHOD3Q2V2M9 1422 aa10.99□□□□□ -0.65
HERC4-202ENST00000373700 IGF1RP08069 1367 aa10.97□□□□□ -0.65
HERC4-202ENST00000373700 SENP3Q9H4L4 574 aaPredicted RBP10.97□□□□□ -0.65
HERC4-202ENST00000373700 SLC4A1APQ9BWU0 796 aaKnown RBP10.94□□□□□ -0.66
HERC4-202ENST00000373700 CFTRP13569 1480 aa10.94□□□□□ -0.66
HERC4-202ENST00000373700 CCNB3Q8WWL7 1395 aa10.93□□□□□ -0.66
HERC4-202ENST00000373700 TONSLQ96HA7 1378 aa10.93□□□□□ -0.66
HERC4-202ENST00000373700 PLEKHD1A6NEE1 506 aa10.93□□□□□ -0.66
HERC4-202ENST00000373700 CFDP1Q9UEE9 299 aaPredicted RBP10.92□□□□□ -0.66
HERC4-202ENST00000373700 KDM2AQ9Y2K7 1162 aa10.92□□□□□ -0.66
HERC4-202ENST00000373700 AQRO60306 1485 aaKnown RBP eCLIP10.91□□□□□ -0.661e-10■□□□□ 10.5
HERC4-202ENST00000373700 CUX1P39880 1505 aa10.9□□□□□ -0.66
HERC4-202ENST00000373700 TSPY4P0CV99 314 aa10.9□□□□□ -0.66
HERC4-202ENST00000373700 TSPY10P0CW01 314 aa10.9□□□□□ -0.66
HERC4-202ENST00000373700 FOXD1Q16676 465 aa10.9□□□□□ -0.67
HERC4-202ENST00000373700 PLPPR3Q6T4P5 718 aa10.9□□□□□ -0.67
HERC4-202ENST00000373700 FKBP8Q14318 412 aa10.88□□□□□ -0.67
HERC4-202ENST00000373700 FHAD1B1AJZ9 1412 aa10.87□□□□□ -0.67
HERC4-202ENST00000373700 NPM1P06748 294 aaKnown RBP eCLIP10.87□□□□□ -0.67
HERC4-202ENST00000373700 CHGAP10645 457 aaKnown RBP10.87□□□□□ -0.67
HERC4-202ENST00000373700 SENP3-EIF4A1A0A087X0R7 540 aa10.86□□□□□ -0.67
HERC4-202ENST00000373700 RGL3Q3MIN7 710 aa10.85□□□□□ -0.67
HERC4-202ENST00000373700 HMGXB3Q12766 1538 aa10.84□□□□□ -0.67
HERC4-202ENST00000373700 JPH4Q96JJ6 628 aa10.84□□□□□ -0.67
HERC4-202ENST00000373700 HNRNPUQ00839 825 aaKnown RBP eCLIP10.84□□□□□ -0.67
HERC4-202ENST00000373700 GAPVD1Q14C86 1478 aa10.84□□□□□ -0.67
HERC4-202ENST00000373700 FAM9BQ8IZU0 186 aa10.83□□□□□ -0.68
HERC4-202ENST00000373700 ARAP1Q96P48 1450 aa10.82□□□□□ -0.68
HERC4-202ENST00000373700 IRX6P78412 446 aaPredicted RBP10.81□□□□□ -0.68
HERC4-202ENST00000373700 KIF21BO75037 1637 aa10.81□□□□□ -0.68
HERC4-202ENST00000373700 RAB3GAP2Q9H2M9 1393 aa10.8□□□□□ -0.68
HERC4-202ENST00000373700 POLA1P09884 1462 aaPredicted RBP10.8□□□□□ -0.68
HERC4-202ENST00000373700 TOP2BQ02880 1626 aa10.8□□□□□ -0.68
HERC4-202ENST00000373700 TOPBP1Q92547 1522 aa10.79□□□□□ -0.68
HERC4-202ENST00000373700 SALL2Q9Y467 1007 aaPredicted RBP10.78□□□□□ -0.68
HERC4-202ENST00000373700 ARHGAP35Q9NRY4 1499 aa10.77□□□□□ -0.68
HERC4-202ENST00000373700 FMN1Q68DA7 1419 aa10.77□□□□□ -0.69
HERC4-202ENST00000373700 PEG3Q9GZU2 1588 aa10.77□□□□□ -0.69
HERC4-202ENST00000373700 PRXQ9BXM0 1461 aa10.77□□□□□ -0.69
HERC4-202ENST00000373700 ZNF644Q9H582 1327 aaPredicted RBP10.75□□□□□ -0.69
HERC4-202ENST00000373700 HNRNPMP52272 730 aaKnown RBP eCLIP10.74□□□□□ -0.698e-8■■■■■ 31.1
HERC4-202ENST00000373700 SETD5Q9C0A6 1442 aa10.74□□□□□ -0.69
HERC4-202ENST00000373700 PHLDB1Q86UU1 1377 aa10.73□□□□□ -0.69
HERC4-202ENST00000373700 MRS2Q9HD23 443 aa10.71□□□□□ -0.69
HERC4-202ENST00000373700 CARMIL2Q6F5E8 1435 aa10.7□□□□□ -0.7
HERC4-202ENST00000373700 EIF4G2P78344 907 aaKnown RBP eCLIP10.7□□□□□ -0.7
HERC4-202ENST00000373700 CLSPNQ9HAW4 1339 aa10.69□□□□□ -0.7
HERC4-202ENST00000373700 DHX57Q6P158 1386 aaKnown RBP10.68□□□□□ -0.7
HERC4-202ENST00000373700 PKD2Q13563 968 aa10.67□□□□□ -0.7
HERC4-202ENST00000373700 URB2Q14146 1524 aaKnown RBP10.67□□□□□ -0.7
HERC4-202ENST00000373700 MPHOSPH9Q99550 1183 aa10.67□□□□□ -0.7
HERC4-202ENST00000373700 MYT1Q01538 1121 aa10.66□□□□□ -0.7
HERC4-202ENST00000373700 STAG3Q9UJ98 1225 aa10.66□□□□□ -0.7
HERC4-202ENST00000373700 DCAF11Q8TEB1 546 aa10.65□□□□□ -0.7
HERC4-202ENST00000373700 ZNF608Q9ULD9 1512 aaPredicted RBP10.64□□□□□ -0.71
HERC4-202ENST00000373700 DNMBPQ6XZF7 1577 aa10.64□□□□□ -0.71
HERC4-202ENST00000373700 SUPT16HQ9Y5B9 1047 aaKnown RBP10.64□□□□□ -0.71
HERC4-202ENST00000373700 ERICH3Q5RHP9 1530 aa10.64□□□□□ -0.71
HERC4-202ENST00000373700 MRC2Q9UBG0 1479 aa10.64□□□□□ -0.71
HERC4-202ENST00000373700 TMC1Q8TDI8 760 aa10.64□□□□□ -0.71
HERC4-202ENST00000373700 ESF1Q9H501 851 aaKnown RBP10.63□□□□□ -0.71
HERC4-202ENST00000373700 PTPRGP23470 1445 aa10.63□□□□□ -0.71
HERC4-202ENST00000373700 GRIN2BQ13224 1484 aa10.63□□□□□ -0.71
HERC4-202ENST00000373700 LRRC9Q6ZRR7 1453 aa10.63□□□□□ -0.71
HERC4-202ENST00000373700 MLECQ14165 292 aa10.62□□□□□ -0.71
HERC4-202ENST00000373700 CARD11Q9BXL7 1154 aa10.62□□□□□ -0.71
HERC4-202ENST00000373700 GGT6Q6P531 493 aa10.62□□□□□ -0.71
HERC4-202ENST00000373700 CYB5RLQ6IPT4 315 aa10.61□□□□□ -0.71
HERC4-202ENST00000373700 L3MBTL2Q969R5 705 aa10.61□□□□□ -0.71
HERC4-202ENST00000373700 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
HERC4-202ENST00000373700 NUP155O75694 1391 aa10.61□□□□□ -0.71
HERC4-202ENST00000373700 PPP1R15AO75807 674 aaPredicted RBP10.6□□□□□ -0.71
HERC4-202ENST00000373700 DAXXQ9UER7 740 aaPredicted RBP10.6□□□□□ -0.71
HERC4-202ENST00000373700 ABCA10Q8WWZ4 1543 aa10.6□□□□□ -0.71
HERC4-202ENST00000373700 PRDM2Q13029 1718 aa10.59□□□□□ -0.71
HERC4-202ENST00000373700 HSPA5P11021 654 aaKnown RBP10.59□□□□□ -0.71
HERC4-202ENST00000373700 LAMC3Q9Y6N6 1575 aa10.58□□□□□ -0.72
HERC4-202ENST00000373700 CCDC18Q5T9S5 1454 aa10.57□□□□□ -0.72
HERC4-202ENST00000373700 FGD6Q6ZV73 1430 aa10.57□□□□□ -0.72
HERC4-202ENST00000373700 NPM2Q86SE8 214 aaKnown RBP10.57□□□□□ -0.72
HERC4-202ENST00000373700 BCL11AQ9H165 835 aa10.57□□□□□ -0.72
HERC4-202ENST00000373700 EFCAB2Q5VUJ9 269 aa10.56□□□□□ -0.72
HERC4-202ENST00000373700 CASKIN1Q8WXD9 1431 aa10.56□□□□□ -0.72
HERC4-202ENST00000373700 ARID4BQ4LE39 1312 aaPredicted RBP10.56□□□□□ -0.72
HERC4-202ENST00000373700 PLEKHG5O94827 1062 aa10.56□□□□□ -0.72
HERC4-202ENST00000373700 NCOA2Q15596 1464 aa10.56□□□□□ -0.72
HERC4-202ENST00000373700 BIVM-ERCC5R4GMW8 1640 aa10.55□□□□□ -0.72
HERC4-202ENST00000373700 KIF3BO15066 747 aa10.55□□□□□ -0.72
HERC4-202ENST00000373700 PRG4Q92954 1404 aaPredicted RBP10.54□□□□□ -0.72
HERC4-202ENST00000373700 NUTM2DQ5VT03 806 aaPredicted RBP10.54□□□□□ -0.72
HERC4-202ENST00000373700 IFT140Q96RY7 1462 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms