RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 IGF1RP08069 1367 aa16.01■□□□□ 0.15
ITM2A-201ENST00000373298 ERICH3Q5RHP9 1530 aa15.99■□□□□ 0.15
ITM2A-201ENST00000373298 CHD1O14646 1710 aa15.99■□□□□ 0.15
ITM2A-201ENST00000373298 FAM9AQ8IZU1 332 aaPredicted RBP15.98■□□□□ 0.15
ITM2A-201ENST00000373298 FBLN2P98095 1184 aa15.97■□□□□ 0.15
ITM2A-201ENST00000373298 ADAMTS12P58397 1594 aa15.97■□□□□ 0.15
ITM2A-201ENST00000373298 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
ITM2A-201ENST00000373298 SYNJ2O15056 1496 aa15.93■□□□□ 0.14
ITM2A-201ENST00000373298 FHAD1B1AJZ9 1412 aa15.91■□□□□ 0.14
ITM2A-201ENST00000373298 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
ITM2A-201ENST00000373298 CARMIL1Q5VZK9 1371 aa15.89■□□□□ 0.13
ITM2A-201ENST00000373298 CUL7Q14999 1698 aa15.89■□□□□ 0.13
ITM2A-201ENST00000373298 GRIN2AQ12879 1464 aa15.88■□□□□ 0.13
ITM2A-201ENST00000373298 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
ITM2A-201ENST00000373298 OSCARQ8IYS5 282 aa15.85■□□□□ 0.13
ITM2A-201ENST00000373298 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
ITM2A-201ENST00000373298 PRXQ9BXM0 1461 aa15.84■□□□□ 0.13
ITM2A-201ENST00000373298 EEA1Q15075 1411 aa15.83■□□□□ 0.12
ITM2A-201ENST00000373298 EHMT2Q96KQ7 1210 aa15.83■□□□□ 0.12
ITM2A-201ENST00000373298 U3KPZ7 1027 aaPredicted RBP15.83■□□□□ 0.12
ITM2A-201ENST00000373298 RAPGEF2Q9Y4G8 1499 aa15.81■□□□□ 0.12
ITM2A-201ENST00000373298 NUP160Q12769 1436 aa15.8■□□□□ 0.12
ITM2A-201ENST00000373298 CLASP1Q7Z460 1538 aa15.79■□□□□ 0.12
ITM2A-201ENST00000373298 DNAJC5Q9H3Z4 198 aa15.75■□□□□ 0.11
ITM2A-201ENST00000373298 KIF21BO75037 1637 aa15.73■□□□□ 0.11
ITM2A-201ENST00000373298 DSG3P32926 999 aa15.7■□□□□ 0.1
ITM2A-201ENST00000373298 ERCC6L2Q5T890 1561 aa15.69■□□□□ 0.1
ITM2A-201ENST00000373298 KIAA0586Q9BVV6 1533 aa15.68■□□□□ 0.1
ITM2A-201ENST00000373298 SPINK5Q9NQ38 1064 aaPredicted RBP15.68■□□□□ 0.1
ITM2A-201ENST00000373298 CTTNBP2Q8WZ74 1663 aa15.67■□□□□ 0.1
ITM2A-201ENST00000373298 SHROOM2Q13796 1616 aa15.66■□□□□ 0.1
ITM2A-201ENST00000373298 LOC105371045A0A1W2PR82 267 aa15.65■□□□□ 0.1
ITM2A-201ENST00000373298 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
ITM2A-201ENST00000373298 ARHGEF11O15085 1522 aa15.65■□□□□ 0.1
ITM2A-201ENST00000373298 IQGAP2Q13576 1575 aa15.64■□□□□ 0.09
ITM2A-201ENST00000373298 GOLGA3Q08378 1498 aa15.64■□□□□ 0.09
ITM2A-201ENST00000373298 RIMBP3CA6NJZ7 1639 aa15.64■□□□□ 0.09
ITM2A-201ENST00000373298 RIMBP3BA6NNM3 1639 aa15.64■□□□□ 0.09
ITM2A-201ENST00000373298 RIMBP3Q9UFD9 1639 aa15.64■□□□□ 0.09
ITM2A-201ENST00000373298 CAPN15O75808 1086 aa15.62■□□□□ 0.09
ITM2A-201ENST00000373298 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
ITM2A-201ENST00000373298 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
ITM2A-201ENST00000373298 PRG4Q92954 1404 aaPredicted RBP15.61■□□□□ 0.09
ITM2A-201ENST00000373298 POTEHQ6S545 545 aa15.59■□□□□ 0.09
ITM2A-201ENST00000373298 DISP1Q96F81 1524 aa15.57■□□□□ 0.08
ITM2A-201ENST00000373298 UGGT2Q9NYU1 1516 aa15.56■□□□□ 0.08
ITM2A-201ENST00000373298 ARAP1Q96P48 1450 aa15.56■□□□□ 0.08
ITM2A-201ENST00000373298 P3H3Q8IVL6 736 aa15.53■□□□□ 0.08
ITM2A-201ENST00000373298 TTBK1Q5TCY1 1321 aaPredicted RBP15.52■□□□□ 0.08
ITM2A-201ENST00000373298 KIAA0556O60303 1618 aa15.51■□□□□ 0.07
ITM2A-201ENST00000373298 CYB5RLQ6IPT4 315 aa15.5■□□□□ 0.07
ITM2A-201ENST00000373298 SAMD9Q5K651 1589 aa15.49■□□□□ 0.07
ITM2A-201ENST00000373298 TNIKQ9UKE5 1360 aa15.49■□□□□ 0.07
ITM2A-201ENST00000373298 CARMIL2Q6F5E8 1435 aa15.46■□□□□ 0.07
ITM2A-201ENST00000373298 SLC4A2P04920 1241 aa15.46■□□□□ 0.06
ITM2A-201ENST00000373298 FHOD3Q2V2M9 1422 aa15.45■□□□□ 0.06
ITM2A-201ENST00000373298 ARHGAP35Q9NRY4 1499 aa15.45■□□□□ 0.06
ITM2A-201ENST00000373298 PTPRGP23470 1445 aa15.42■□□□□ 0.06
ITM2A-201ENST00000373298 CEP162Q5TB80 1403 aa15.4■□□□□ 0.06
ITM2A-201ENST00000373298 EFCAB5A4FU69 1503 aa15.4■□□□□ 0.06
ITM2A-201ENST00000373298 CLIP1P30622 1438 aa15.4■□□□□ 0.06
ITM2A-201ENST00000373298 KCNA4P22459 653 aa15.39■□□□□ 0.05
ITM2A-201ENST00000373298 PLB1Q6P1J6 1458 aa15.38■□□□□ 0.05
ITM2A-201ENST00000373298 ADCY10Q96PN6 1610 aa15.38■□□□□ 0.05
ITM2A-201ENST00000373298 ABCA8O94911 1581 aa15.33■□□□□ 0.05
ITM2A-201ENST00000373298 UACAQ9BZF9 1416 aa15.33■□□□□ 0.04
ITM2A-201ENST00000373298 ARID3CA6NKF2 412 aa15.32■□□□□ 0.04
ITM2A-201ENST00000373298 APLP2Q06481 763 aa15.31■□□□□ 0.04
ITM2A-201ENST00000373298 ABCC2Q92887 1545 aa15.3■□□□□ 0.04
ITM2A-201ENST00000373298 RAPGEF6Q8TEU7 1601 aa15.29■□□□□ 0.04
ITM2A-201ENST00000373298 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
ITM2A-201ENST00000373298 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
ITM2A-201ENST00000373298 UHRF1BP1LA0JNW5 1464 aa15.27■□□□□ 0.04
ITM2A-201ENST00000373298 NUP153P49790 1475 aaKnown RBP15.27■□□□□ 0.03
ITM2A-201ENST00000373298 LRRIQ1Q96JM4 1722 aa15.26■□□□□ 0.03
ITM2A-201ENST00000373298 PCF11O94913 1555 aaKnown RBP15.26■□□□□ 0.03
ITM2A-201ENST00000373298 ZCCHC11Q5TAX3 1644 aaKnown RBP15.24■□□□□ 0.03
ITM2A-201ENST00000373298 FMN1Q68DA7 1419 aa15.24■□□□□ 0.03
ITM2A-201ENST00000373298 ABCB7O75027 752 aa15.23■□□□□ 0.03
ITM2A-201ENST00000373298 ATP10BO94823 1461 aa15.23■□□□□ 0.03
ITM2A-201ENST00000373298 KDM5BQ9UGL1 1544 aa15.23■□□□□ 0.03
ITM2A-201ENST00000373298 ATP1B4Q9UN42 357 aaPredicted RBP15.22■□□□□ 0.03
ITM2A-201ENST00000373298 CDK13Q14004 1512 aaKnown RBP15.21■□□□□ 0.03
ITM2A-201ENST00000373298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.21■□□□□ 0.02
ITM2A-201ENST00000373298 HNRNPUL2Q1KMD3 747 aaKnown RBP15.21■□□□□ 0.02
ITM2A-201ENST00000373298 CASKIN1Q8WXD9 1431 aa15.19■□□□□ 0.02
ITM2A-201ENST00000373298 HECW1Q76N89 1606 aa15.18■□□□□ 0.02
ITM2A-201ENST00000373298 EPRSP07814 1512 aaKnown RBP15.17■□□□□ 0.02
ITM2A-201ENST00000373298 VPS8Q8N3P4 1428 aa15.17■□□□□ 0.02
ITM2A-201ENST00000373298 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
ITM2A-201ENST00000373298 ASXL2Q76L83 1435 aa15.16■□□□□ 0.02
ITM2A-201ENST00000373298 FYCO1Q9BQS8 1478 aa15.16■□□□□ 0.02
ITM2A-201ENST00000373298 MAPKBP1O60336 1514 aa15.15■□□□□ 0.02
ITM2A-201ENST00000373298 MAGI3Q5TCQ9 1506 aa15.11■□□□□ 0.01
ITM2A-201ENST00000373298 KIF13AQ9H1H9 1805 aa15.11■□□□□ 0.01
ITM2A-201ENST00000373298 SAMD1Q6SPF0 538 aaPredicted RBP15.1■□□□□ 0.01
ITM2A-201ENST00000373298 WDR7Q9Y4E6 1490 aa15.1■□□□□ 0.01
ITM2A-201ENST00000373298 KCNH8Q96L42 1107 aa15.1■□□□□ 0.01
ITM2A-201ENST00000373298 DIP2BQ9P265 1576 aa15.09■□□□□ 0.01
ITM2A-201ENST00000373298 ABCC10Q5T3U5 1492 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms