RNA–Protein interactions for RNA: ENST00000373093.4

GRIK3-202, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIK3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-202ENST00000373093 TRIM52Q96A61 297 aa15.68■□□□□ 0.1
GRIK3-202ENST00000373093 CARMIL1Q5VZK9 1371 aa15.67■□□□□ 0.1
GRIK3-202ENST00000373093 PHLDB1Q86UU1 1377 aa15.67■□□□□ 0.1
GRIK3-202ENST00000373093 ARID3CA6NKF2 412 aa15.67■□□□□ 0.1
GRIK3-202ENST00000373093 ERICH3Q5RHP9 1530 aa15.66■□□□□ 0.1
GRIK3-202ENST00000373093 RRBP1Q9P2E9 1410 aaKnown RBP15.66■□□□□ 0.1
GRIK3-202ENST00000373093 CFTRP13569 1480 aa15.65■□□□□ 0.1
GRIK3-202ENST00000373093 ANP32EQ9BTT0 268 aa15.64■□□□□ 0.09
GRIK3-202ENST00000373093 FHOD3Q2V2M9 1422 aa15.61■□□□□ 0.09
GRIK3-202ENST00000373093 RAD54L2Q9Y4B4 1467 aa15.6■□□□□ 0.09
GRIK3-202ENST00000373093 FGD5Q6ZNL6 1462 aa15.6■□□□□ 0.09
GRIK3-202ENST00000373093 CLSPNQ9HAW4 1339 aa15.59■□□□□ 0.09
GRIK3-202ENST00000373093 CADPSQ9ULU8 1353 aa15.56■□□□□ 0.08
GRIK3-202ENST00000373093 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
GRIK3-202ENST00000373093 MAPKBP1O60336 1514 aa15.55■□□□□ 0.08
GRIK3-202ENST00000373093 NESP48681 1621 aa15.55■□□□□ 0.08
GRIK3-202ENST00000373093 SETD5Q9C0A6 1442 aa15.55■□□□□ 0.08
GRIK3-202ENST00000373093 CHIC2Q9UKJ5 165 aa15.54■□□□□ 0.08
GRIK3-202ENST00000373093 BCL11AQ9H165 835 aa15.53■□□□□ 0.08
GRIK3-202ENST00000373093 WDR97A6NE52 1622 aa15.53■□□□□ 0.08
GRIK3-202ENST00000373093 LRRC9Q6ZRR7 1453 aa15.51■□□□□ 0.07
GRIK3-202ENST00000373093 CNGB1Q14028 1251 aaPredicted RBP15.5■□□□□ 0.07
GRIK3-202ENST00000373093 RBM19Q9Y4C8 960 aaKnown RBP15.49■□□□□ 0.07
GRIK3-202ENST00000373093 TIAM1Q13009 1591 aa15.49■□□□□ 0.07
GRIK3-202ENST00000373093 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
GRIK3-202ENST00000373093 RRP7BPQ9NSQ0 103 aa15.48■□□□□ 0.07
GRIK3-202ENST00000373093 NEFLP07196 543 aa15.46■□□□□ 0.07
GRIK3-202ENST00000373093 FANCD2Q9BXW9 1451 aa15.44■□□□□ 0.06
GRIK3-202ENST00000373093 FOXD1Q16676 465 aa15.44■□□□□ 0.06
GRIK3-202ENST00000373093 PCF11O94913 1555 aaKnown RBP15.44■□□□□ 0.06
GRIK3-202ENST00000373093 PPP1R15AO75807 674 aaPredicted RBP15.43■□□□□ 0.06
GRIK3-202ENST00000373093 SENP3-EIF4A1A0A087X0R7 540 aa15.42■□□□□ 0.06
GRIK3-202ENST00000373093 MTUS2Q5JR59 1369 aa15.4■□□□□ 0.06
GRIK3-202ENST00000373093 PTPRKQ15262 1439 aa15.39■□□□□ 0.05
GRIK3-202ENST00000373093 PRDM2Q13029 1718 aa15.38■□□□□ 0.05
GRIK3-202ENST00000373093 ANP32CO43423 234 aa15.38■□□□□ 0.05
GRIK3-202ENST00000373093 TONSLQ96HA7 1378 aa15.38■□□□□ 0.05
GRIK3-202ENST00000373093 MSH5O43196 834 aa15.37■□□□□ 0.05
GRIK3-202ENST00000373093 FHAD1B1AJZ9 1412 aa15.37■□□□□ 0.05
GRIK3-202ENST00000373093 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
GRIK3-202ENST00000373093 LAMC3Q9Y6N6 1575 aa15.35■□□□□ 0.05
GRIK3-202ENST00000373093 HNRNPUQ00839 825 aaKnown RBP eCLIP15.33■□□□□ 0.04
GRIK3-202ENST00000373093 AQRO60306 1485 aaKnown RBP eCLIP15.32■□□□□ 0.04
GRIK3-202ENST00000373093 TOPBP1Q92547 1522 aa15.31■□□□□ 0.04
GRIK3-202ENST00000373093 CCDC184Q52MB2 194 aa15.3■□□□□ 0.04
GRIK3-202ENST00000373093 FGD6Q6ZV73 1430 aa15.29■□□□□ 0.04
GRIK3-202ENST00000373093 CCDC18Q5T9S5 1454 aa15.27■□□□□ 0.04
GRIK3-202ENST00000373093 POLR3GLQ9BT43 218 aa15.27■□□□□ 0.04
GRIK3-202ENST00000373093 PDS5BQ9NTI5 1447 aa15.27■□□□□ 0.03
GRIK3-202ENST00000373093 CASKIN1Q8WXD9 1431 aa15.26■□□□□ 0.03
GRIK3-202ENST00000373093 HSPA5P11021 654 aaKnown RBP15.25■□□□□ 0.03
GRIK3-202ENST00000373093 C11orf95C9JLR9 678 aaPredicted RBP15.22■□□□□ 0.03
GRIK3-202ENST00000373093 ERICH6Q7L0X2 663 aa15.22■□□□□ 0.03
GRIK3-202ENST00000373093 FAM9BQ8IZU0 186 aa15.22■□□□□ 0.03
GRIK3-202ENST00000373093 ZNF644Q9H582 1327 aaPredicted RBP15.22■□□□□ 0.03
GRIK3-202ENST00000373093 MAP3K1Q13233 1512 aa15.22■□□□□ 0.03
GRIK3-202ENST00000373093 ABCA10Q8WWZ4 1543 aa15.22■□□□□ 0.03
GRIK3-202ENST00000373093 NCOA2Q15596 1464 aa15.21■□□□□ 0.03
GRIK3-202ENST00000373093 FYCO1Q9BQS8 1478 aa15.21■□□□□ 0.03
GRIK3-202ENST00000373093 ZNF326Q5BKZ1 582 aaKnown RBP15.21■□□□□ 0.03
GRIK3-202ENST00000373093 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.03
GRIK3-202ENST00000373093 WASHC2AQ641Q2 1341 aa15.2■□□□□ 0.02
GRIK3-202ENST00000373093 NAIPQ13075 1403 aa15.2■□□□□ 0.02
GRIK3-202ENST00000373093 CFAP43Q8NDM7 1665 aa15.19■□□□□ 0.02
GRIK3-202ENST00000373093 DNMBPQ6XZF7 1577 aa15.19■□□□□ 0.02
GRIK3-202ENST00000373093 FMN1Q68DA7 1419 aa15.19■□□□□ 0.02
GRIK3-202ENST00000373093 L3MBTL2Q969R5 705 aa15.19■□□□□ 0.02
GRIK3-202ENST00000373093 FBLN2P98095 1184 aa15.18■□□□□ 0.02
GRIK3-202ENST00000373093 B4GALNT3Q6L9W6 998 aa15.18■□□□□ 0.02
GRIK3-202ENST00000373093 SNAPC4Q5SXM2 1469 aa15.18■□□□□ 0.02
GRIK3-202ENST00000373093 CDK11AQ9UQ88 783 aaPredicted RBP15.17■□□□□ 0.02
GRIK3-202ENST00000373093 GAPVD1Q14C86 1478 aa15.16■□□□□ 0.02
GRIK3-202ENST00000373093 ZNF777Q9ULD5 760 aaPredicted RBP15.16■□□□□ 0.02
GRIK3-202ENST00000373093 CCER2I3L3R5 266 aa15.16■□□□□ 0.02
GRIK3-202ENST00000373093 UACAQ9BZF9 1416 aa15.15■□□□□ 0.02
GRIK3-202ENST00000373093 MPHOSPH9Q99550 1183 aa15.15■□□□□ 0.02
GRIK3-202ENST00000373093 MYOM3Q5VTT5 1437 aa15.15■□□□□ 0.02
GRIK3-202ENST00000373093 MAGI3Q5TCQ9 1506 aa15.14■□□□□ 0.01
GRIK3-202ENST00000373093 TIMELESSQ9UNS1 1208 aa15.14■□□□□ 0.01
GRIK3-202ENST00000373093 HFM1A2PYH4 1435 aa15.14■□□□□ 0.01
GRIK3-202ENST00000373093 NBPF8Q3BBV2 869 aa15.13■□□□□ 0.01
GRIK3-202ENST00000373093 CDK13Q14004 1512 aaKnown RBP15.12■□□□□ 0.01
GRIK3-202ENST00000373093 NBR1Q14596 966 aa15.12■□□□□ 0.01
GRIK3-202ENST00000373093 PTPN23Q9H3S7 1636 aa15.12■□□□□ 0.01
GRIK3-202ENST00000373093 LRRIQ1Q96JM4 1722 aa15.11■□□□□ 0.01
GRIK3-202ENST00000373093 KDM6BO15054 1643 aa15.11■□□□□ 0.01
GRIK3-202ENST00000373093 KIF21AQ7Z4S6 1674 aa15.11■□□□□ 0.01
GRIK3-202ENST00000373093 EIF4G2P78344 907 aaKnown RBP eCLIP15.1■□□□□ 0.01
GRIK3-202ENST00000373093 EFCAB5A4FU69 1503 aa15.09■□□□□ 0.01
GRIK3-202ENST00000373093 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0
GRIK3-202ENST00000373093 MRS2Q9HD23 443 aa15.08■□□□□ 0
GRIK3-202ENST00000373093 DENND4BO75064 1496 aaPredicted RBP15.07■□□□□ 0
GRIK3-202ENST00000373093 GRIN2BQ13224 1484 aa15.07■□□□□ 0
GRIK3-202ENST00000373093 CTTNBP2Q8WZ74 1663 aa15.07■□□□□ 0
GRIK3-202ENST00000373093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.04■□□□□ -0
GRIK3-202ENST00000373093 MRC2Q9UBG0 1479 aa15.04■□□□□ -0
GRIK3-202ENST00000373093 KDM5BQ9UGL1 1544 aa15.03■□□□□ -0
GRIK3-202ENST00000373093 CUL7Q14999 1698 aa15.02□□□□□ -0.01
GRIK3-202ENST00000373093 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
GRIK3-202ENST00000373093 PRKRIP1Q9H875 184 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms