RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
LCN2-202ENST00000372998 RANGAP1P46060 587 aaPredicted RBP15.77■□□□□ 0.12
LCN2-202ENST00000372998 KANK4Q5T7N3 995 aaPredicted RBP15.77■□□□□ 0.12
LCN2-202ENST00000372998 LRRC9Q6ZRR7 1453 aa15.77■□□□□ 0.11
LCN2-202ENST00000372998 FYCO1Q9BQS8 1478 aa15.74■□□□□ 0.11
LCN2-202ENST00000372998 CTTNBP2Q8WZ74 1663 aa15.73■□□□□ 0.11
LCN2-202ENST00000372998 SETD5Q9C0A6 1442 aa15.73■□□□□ 0.11
LCN2-202ENST00000372998 ABCA10Q8WWZ4 1543 aa15.73■□□□□ 0.11
LCN2-202ENST00000372998 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.1
LCN2-202ENST00000372998 RAB3GAP2Q9H2M9 1393 aa15.67■□□□□ 0.1
LCN2-202ENST00000372998 YTHDC1Q96MU7 727 aaKnown RBP15.67■□□□□ 0.1
LCN2-202ENST00000372998 FMN1Q68DA7 1419 aa15.67■□□□□ 0.1
LCN2-202ENST00000372998 CASKIN1Q8WXD9 1431 aa15.67■□□□□ 0.1
LCN2-202ENST00000372998 KIF21AQ7Z4S6 1674 aa15.66■□□□□ 0.1
LCN2-202ENST00000372998 PCF11O94913 1555 aaKnown RBP15.65■□□□□ 0.1
LCN2-202ENST00000372998 THOC2Q8NI27 1593 aaKnown RBP15.65■□□□□ 0.1
LCN2-202ENST00000372998 LAMC3Q9Y6N6 1575 aa15.65■□□□□ 0.1
LCN2-202ENST00000372998 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
LCN2-202ENST00000372998 MAPKBP1O60336 1514 aa15.61■□□□□ 0.09
LCN2-202ENST00000372998 WDR97A6NE52 1622 aa15.61■□□□□ 0.09
LCN2-202ENST00000372998 POLA1P09884 1462 aaPredicted RBP15.58■□□□□ 0.08
LCN2-202ENST00000372998 PHLDB1Q86UU1 1377 aa15.56■□□□□ 0.08
LCN2-202ENST00000372998 SAMD9Q5K651 1589 aa15.54■□□□□ 0.08
LCN2-202ENST00000372998 ABCA5Q8WWZ7 1642 aa15.52■□□□□ 0.08
LCN2-202ENST00000372998 SUPT6HQ7KZ85 1726 aaKnown RBP15.51■□□□□ 0.07
LCN2-202ENST00000372998 ITGAEP38570 1179 aa15.51■□□□□ 0.07
LCN2-202ENST00000372998 FAM50AQ14320 339 aaKnown RBP15.51■□□□□ 0.07
LCN2-202ENST00000372998 EHBP1L1Q8N3D4 1523 aa15.5■□□□□ 0.07
LCN2-202ENST00000372998 FGD6Q6ZV73 1430 aa15.5■□□□□ 0.07
LCN2-202ENST00000372998 CCDC18Q5T9S5 1454 aa15.49■□□□□ 0.07
LCN2-202ENST00000372998 FHOD3Q2V2M9 1422 aa15.49■□□□□ 0.07
LCN2-202ENST00000372998 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
LCN2-202ENST00000372998 SNAPC4Q5SXM2 1469 aa15.47■□□□□ 0.07
LCN2-202ENST00000372998 CCER2I3L3R5 266 aa15.47■□□□□ 0.07
LCN2-202ENST00000372998 MTUS2Q5JR59 1369 aa15.47■□□□□ 0.07
LCN2-202ENST00000372998 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.07
LCN2-202ENST00000372998 HFM1A2PYH4 1435 aa15.46■□□□□ 0.07
LCN2-202ENST00000372998 UACAQ9BZF9 1416 aa15.46■□□□□ 0.07
LCN2-202ENST00000372998 GRIN2BQ13224 1484 aa15.43■□□□□ 0.06
LCN2-202ENST00000372998 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
LCN2-202ENST00000372998 PTPN23Q9H3S7 1636 aa15.43■□□□□ 0.06
LCN2-202ENST00000372998 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
LCN2-202ENST00000372998 AKNAQ7Z591 1439 aa15.43■□□□□ 0.06
LCN2-202ENST00000372998 PPP1R15AO75807 674 aaPredicted RBP15.42■□□□□ 0.06
LCN2-202ENST00000372998 HECW1Q76N89 1606 aa15.42■□□□□ 0.06
LCN2-202ENST00000372998 TONSLQ96HA7 1378 aa15.41■□□□□ 0.06
LCN2-202ENST00000372998 URB2Q14146 1524 aaKnown RBP15.4■□□□□ 0.06
LCN2-202ENST00000372998 ATP1B4Q9UN42 357 aaPredicted RBP15.4■□□□□ 0.06
LCN2-202ENST00000372998 SUPT16HQ9Y5B9 1047 aaKnown RBP15.4■□□□□ 0.06
LCN2-202ENST00000372998 GCC2Q8IWJ2 1684 aa15.39■□□□□ 0.05
LCN2-202ENST00000372998 TCOF1Q13428 1488 aaKnown RBP15.38■□□□□ 0.05
LCN2-202ENST00000372998 NCOA2Q15596 1464 aa15.38■□□□□ 0.05
LCN2-202ENST00000372998 UGGT2Q9NYU1 1516 aa15.38■□□□□ 0.05
LCN2-202ENST00000372998 ANP32CO43423 234 aa15.37■□□□□ 0.05
LCN2-202ENST00000372998 ARHGEF11O15085 1522 aa15.37■□□□□ 0.05
LCN2-202ENST00000372998 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
LCN2-202ENST00000372998 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
LCN2-202ENST00000372998 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
LCN2-202ENST00000372998 LRRIQ1Q96JM4 1722 aa15.34■□□□□ 0.05
LCN2-202ENST00000372998 NESP48681 1621 aa15.33■□□□□ 0.04
LCN2-202ENST00000372998 NEFLP07196 543 aa15.33■□□□□ 0.04
LCN2-202ENST00000372998 TARBP1Q13395 1621 aaKnown RBP15.32■□□□□ 0.04
LCN2-202ENST00000372998 NAIPQ13075 1403 aa15.32■□□□□ 0.04
LCN2-202ENST00000372998 IQGAP2Q13576 1575 aa15.31■□□□□ 0.04
LCN2-202ENST00000372998 DDX10Q13206 875 aaKnown RBP15.3■□□□□ 0.04
LCN2-202ENST00000372998 SIN3AQ96ST3 1273 aa15.3■□□□□ 0.04
LCN2-202ENST00000372998 ADAMTS12P58397 1594 aa15.26■□□□□ 0.03
LCN2-202ENST00000372998 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
LCN2-202ENST00000372998 ROCK1Q13464 1354 aa15.23■□□□□ 0.03
LCN2-202ENST00000372998 EPRSP07814 1512 aaKnown RBP15.22■□□□□ 0.03
LCN2-202ENST00000372998 WDR62O43379 1518 aa15.22■□□□□ 0.03
LCN2-202ENST00000372998 PTPRKQ15262 1439 aa15.21■□□□□ 0.03
LCN2-202ENST00000372998 MRC2Q9UBG0 1479 aa15.2■□□□□ 0.02
LCN2-202ENST00000372998 ERICH6BQ5W0A0 696 aa15.19■□□□□ 0.02
LCN2-202ENST00000372998 CDK11AQ9UQ88 783 aaPredicted RBP15.18■□□□□ 0.02
LCN2-202ENST00000372998 POLR1AO95602 1720 aaPredicted RBP15.17■□□□□ 0.02
LCN2-202ENST00000372998 IFT140Q96RY7 1462 aa15.17■□□□□ 0.02
LCN2-202ENST00000372998 ITSN2Q9NZM3 1697 aa15.16■□□□□ 0.02
LCN2-202ENST00000372998 DNMT1P26358 1616 aaKnown RBP15.15■□□□□ 0.02
LCN2-202ENST00000372998 MAGI3Q5TCQ9 1506 aa15.15■□□□□ 0.02
LCN2-202ENST00000372998 KIAA0586Q9BVV6 1533 aa15.14■□□□□ 0.01
LCN2-202ENST00000372998 KDM5BQ9UGL1 1544 aa15.14■□□□□ 0.01
LCN2-202ENST00000372998 EIF4G2P78344 907 aaKnown RBP eCLIP15.14■□□□□ 0.01
LCN2-202ENST00000372998 TSHZ2Q9NRE2 1034 aa15.13■□□□□ 0.01
LCN2-202ENST00000372998 FKBP8Q14318 412 aa15.12■□□□□ 0.01
LCN2-202ENST00000372998 ADGBQ8N7X0 1667 aa15.12■□□□□ 0.01
LCN2-202ENST00000372998 KIAA0556O60303 1618 aa15.11■□□□□ 0.01
LCN2-202ENST00000372998 RAPGEF6Q8TEU7 1601 aa15.1■□□□□ 0.01
LCN2-202ENST00000372998 TRIM52Q96A61 297 aa15.1■□□□□ 0.01
LCN2-202ENST00000372998 CNTLNQ9NXG0 1405 aa15.09■□□□□ 0.01
LCN2-202ENST00000372998 DAPK1P53355 1430 aa15.09■□□□□ 0.01
LCN2-202ENST00000372998 RPRD2Q5VT52 1461 aaKnown RBP15.08■□□□□ 0.01
LCN2-202ENST00000372998 MPHOSPH9Q99550 1183 aa15.08■□□□□ 0
LCN2-202ENST00000372998 ADCY10Q96PN6 1610 aa15.07■□□□□ 0
LCN2-202ENST00000372998 KCNH8Q96L42 1107 aa15.07■□□□□ 0
LCN2-202ENST00000372998 CDK13Q14004 1512 aaKnown RBP15.05■□□□□ -0
LCN2-202ENST00000372998 NCOA1Q15788 1441 aa15.04■□□□□ -0
LCN2-202ENST00000372998 ARID4BQ4LE39 1312 aaPredicted RBP15.04■□□□□ -0
LCN2-202ENST00000372998 HSPA5P11021 654 aaKnown RBP15.04■□□□□ -0
LCN2-202ENST00000372998 RRP7BPQ9NSQ0 103 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms