RNA–Protein interactions for RNA: ENST00000372271.3

FAM78A-203, Transcript of family with sequence similarity 78 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78A, Length 3,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-203ENST00000372271 SETD5Q9C0A6 1442 aa18.73■□□□□ 0.59
FAM78A-203ENST00000372271 HNRNPUQ00839 825 aaKnown RBP eCLIP18.73■□□□□ 0.59
FAM78A-203ENST00000372271 RRP7BPQ9NSQ0 103 aa18.69■□□□□ 0.58
FAM78A-203ENST00000372271 PRXQ9BXM0 1461 aa18.68■□□□□ 0.58
FAM78A-203ENST00000372271 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
FAM78A-203ENST00000372271 ZNF326Q5BKZ1 582 aaKnown RBP18.66■□□□□ 0.58
FAM78A-203ENST00000372271 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
FAM78A-203ENST00000372271 FHAD1B1AJZ9 1412 aa18.65■□□□□ 0.58
FAM78A-203ENST00000372271 IGF1RP08069 1367 aa18.63■□□□□ 0.57
FAM78A-203ENST00000372271 ARHGAP35Q9NRY4 1499 aa18.62■□□□□ 0.57
FAM78A-203ENST00000372271 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
FAM78A-203ENST00000372271 FAM9BQ8IZU0 186 aa18.6■□□□□ 0.57
FAM78A-203ENST00000372271 FHOD3Q2V2M9 1422 aa18.6■□□□□ 0.57
FAM78A-203ENST00000372271 RRBP1Q9P2E9 1410 aaKnown RBP18.6■□□□□ 0.57
FAM78A-203ENST00000372271 PEG3Q9GZU2 1588 aa18.6■□□□□ 0.57
FAM78A-203ENST00000372271 TSHZ2Q9NRE2 1034 aa18.59■□□□□ 0.57
FAM78A-203ENST00000372271 CDK11AQ9UQ88 783 aaPredicted RBP18.59■□□□□ 0.57
FAM78A-203ENST00000372271 CUX1P39880 1505 aa18.58■□□□□ 0.57
FAM78A-203ENST00000372271 PPP1R15AO75807 674 aaPredicted RBP18.58■□□□□ 0.56
FAM78A-203ENST00000372271 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
FAM78A-203ENST00000372271 PHLDB1Q86UU1 1377 aa18.56■□□□□ 0.56
FAM78A-203ENST00000372271 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
FAM78A-203ENST00000372271 TIMELESSQ9UNS1 1208 aa18.53■□□□□ 0.56
FAM78A-203ENST00000372271 ZNF777Q9ULD5 760 aaPredicted RBP18.52■□□□□ 0.55
FAM78A-203ENST00000372271 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.55
FAM78A-203ENST00000372271 CFTRP13569 1480 aa18.49■□□□□ 0.55
FAM78A-203ENST00000372271 FBLN2P98095 1184 aa18.49■□□□□ 0.55
FAM78A-203ENST00000372271 FGD5Q6ZNL6 1462 aa18.49■□□□□ 0.55
FAM78A-203ENST00000372271 ANP32EQ9BTT0 268 aa18.47■□□□□ 0.55
FAM78A-203ENST00000372271 MRS2Q9HD23 443 aa18.47■□□□□ 0.55
FAM78A-203ENST00000372271 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
FAM78A-203ENST00000372271 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.55
FAM78A-203ENST00000372271 CCER2I3L3R5 266 aa18.46■□□□□ 0.55
FAM78A-203ENST00000372271 SENP3-EIF4A1A0A087X0R7 540 aa18.44■□□□□ 0.54
FAM78A-203ENST00000372271 FOXD1Q16676 465 aa18.44■□□□□ 0.54
FAM78A-203ENST00000372271 RAD54L2Q9Y4B4 1467 aa18.41■□□□□ 0.54
FAM78A-203ENST00000372271 HSPA5P11021 654 aaKnown RBP18.4■□□□□ 0.54
FAM78A-203ENST00000372271 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
FAM78A-203ENST00000372271 RBM19Q9Y4C8 960 aaKnown RBP18.39■□□□□ 0.53
FAM78A-203ENST00000372271 FMN1Q68DA7 1419 aa18.38■□□□□ 0.53
FAM78A-203ENST00000372271 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
FAM78A-203ENST00000372271 BIVM-ERCC5R4GMW8 1640 aa18.37■□□□□ 0.53
FAM78A-203ENST00000372271 TIAM1Q13009 1591 aa18.35■□□□□ 0.53
FAM78A-203ENST00000372271 HMGXB3Q12766 1538 aa18.35■□□□□ 0.53
FAM78A-203ENST00000372271 WDR97A6NE52 1622 aa18.35■□□□□ 0.53
FAM78A-203ENST00000372271 CCDC18Q5T9S5 1454 aa18.31■□□□□ 0.52
FAM78A-203ENST00000372271 SALL2Q9Y467 1007 aaPredicted RBP18.29■□□□□ 0.52
FAM78A-203ENST00000372271 FGD6Q6ZV73 1430 aa18.29■□□□□ 0.52
FAM78A-203ENST00000372271 MPHOSPH9Q99550 1183 aa18.28■□□□□ 0.52
FAM78A-203ENST00000372271 KDM2AQ9Y2K7 1162 aa18.28■□□□□ 0.52
FAM78A-203ENST00000372271 L3MBTL2Q969R5 705 aa18.28■□□□□ 0.52
FAM78A-203ENST00000372271 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
FAM78A-203ENST00000372271 TMC1Q8TDI8 760 aa18.23■□□□□ 0.51
FAM78A-203ENST00000372271 MAPKBP1O60336 1514 aa18.23■□□□□ 0.51
FAM78A-203ENST00000372271 CASKIN1Q8WXD9 1431 aa18.23■□□□□ 0.51
FAM78A-203ENST00000372271 CFDP1Q9UEE9 299 aaPredicted RBP18.21■□□□□ 0.51
FAM78A-203ENST00000372271 CCDC136Q96JN2 1154 aa18.2■□□□□ 0.5
FAM78A-203ENST00000372271 PPP4R2Q9NY27 417 aa18.19■□□□□ 0.5
FAM78A-203ENST00000372271 UACAQ9BZF9 1416 aa18.19■□□□□ 0.5
FAM78A-203ENST00000372271 NESP48681 1621 aa18.19■□□□□ 0.5
FAM78A-203ENST00000372271 PCF11O94913 1555 aaKnown RBP18.19■□□□□ 0.5
FAM78A-203ENST00000372271 FYCO1Q9BQS8 1478 aa18.17■□□□□ 0.5
FAM78A-203ENST00000372271 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
FAM78A-203ENST00000372271 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
FAM78A-203ENST00000372271 WASHC2AQ641Q2 1341 aa18.15■□□□□ 0.5
FAM78A-203ENST00000372271 MYT1LQ9UL68 1186 aa18.15■□□□□ 0.5
FAM78A-203ENST00000372271 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.5
FAM78A-203ENST00000372271 NCOA2Q15596 1464 aa18.14■□□□□ 0.5
FAM78A-203ENST00000372271 NPM2Q86SE8 214 aaKnown RBP18.14■□□□□ 0.49
FAM78A-203ENST00000372271 RTL5Q5HYW3 569 aaPredicted RBP18.13■□□□□ 0.49
FAM78A-203ENST00000372271 NBR1Q14596 966 aa18.13■□□□□ 0.49
FAM78A-203ENST00000372271 MAP3K1Q13233 1512 aa18.12■□□□□ 0.49
FAM78A-203ENST00000372271 TSPY4P0CV99 314 aa18.12■□□□□ 0.49
FAM78A-203ENST00000372271 TSPY10P0CW01 314 aa18.12■□□□□ 0.49
FAM78A-203ENST00000372271 ANP32AP39687 249 aaKnown RBP18.11■□□□□ 0.49
FAM78A-203ENST00000372271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.49
FAM78A-203ENST00000372271 GAPVD1Q14C86 1478 aa18.11■□□□□ 0.49
FAM78A-203ENST00000372271 PRKRIP1Q9H875 184 aaPredicted RBP18.1■□□□□ 0.49
FAM78A-203ENST00000372271 TOPBP1Q92547 1522 aa18.1■□□□□ 0.49
FAM78A-203ENST00000372271 CARD11Q9BXL7 1154 aa18.1■□□□□ 0.49
FAM78A-203ENST00000372271 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
FAM78A-203ENST00000372271 HFM1A2PYH4 1435 aa18.08■□□□□ 0.49
FAM78A-203ENST00000372271 CCDC184Q52MB2 194 aa18.08■□□□□ 0.49
FAM78A-203ENST00000372271 RGL3Q3MIN7 710 aa18.08■□□□□ 0.48
FAM78A-203ENST00000372271 ZNF644Q9H582 1327 aaPredicted RBP18.08■□□□□ 0.48
FAM78A-203ENST00000372271 PKD2Q13563 968 aa18.07■□□□□ 0.48
FAM78A-203ENST00000372271 NAIPQ13075 1403 aa18.06■□□□□ 0.48
FAM78A-203ENST00000372271 EFCAB5A4FU69 1503 aa18.05■□□□□ 0.48
FAM78A-203ENST00000372271 PLEKHD1A6NEE1 506 aa18.05■□□□□ 0.48
FAM78A-203ENST00000372271 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
FAM78A-203ENST00000372271 DAXXQ9UER7 740 aaPredicted RBP18.03■□□□□ 0.48
FAM78A-203ENST00000372271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.03■□□□□ 0.481e-6■■■□□ 14.9
FAM78A-203ENST00000372271 PTPRKQ15262 1439 aa18.02■□□□□ 0.48
FAM78A-203ENST00000372271 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
FAM78A-203ENST00000372271 DCAF11Q8TEB1 546 aa18■□□□□ 0.47
FAM78A-203ENST00000372271 DNMBPQ6XZF7 1577 aa17.99■□□□□ 0.47
FAM78A-203ENST00000372271 NBPF8Q3BBV2 869 aa17.99■□□□□ 0.47
FAM78A-203ENST00000372271 CCDC7Q96M83 1385 aa17.98■□□□□ 0.47
FAM78A-203ENST00000372271 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
FAM78A-203ENST00000372271 C11orf95C9JLR9 678 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms