RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 URB2Q14146 1524 aaKnown RBP28.14■■■□□ 2.09
TMEM53-202ENST00000372237 CCNB3Q8WWL7 1395 aa28.11■■■□□ 2.09
TMEM53-202ENST00000372237 ABCA10Q8WWZ4 1543 aa28.09■■■□□ 2.09
TMEM53-202ENST00000372237 CARMIL1Q5VZK9 1371 aa28.06■■■□□ 2.08
TMEM53-202ENST00000372237 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
TMEM53-202ENST00000372237 TIAM1Q13009 1591 aa27.98■■■□□ 2.07
TMEM53-202ENST00000372237 MAP3K1Q13233 1512 aa27.97■■■□□ 2.07
TMEM53-202ENST00000372237 ITGAEP38570 1179 aa27.96■■■□□ 2.07
TMEM53-202ENST00000372237 LRRC9Q6ZRR7 1453 aa27.87■■■□□ 2.05
TMEM53-202ENST00000372237 FHAD1B1AJZ9 1412 aa27.86■■■□□ 2.05
TMEM53-202ENST00000372237 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
TMEM53-202ENST00000372237 WDR97A6NE52 1622 aa27.85■■■□□ 2.05
TMEM53-202ENST00000372237 RAB3GAP2Q9H2M9 1393 aa27.84■■■□□ 2.05
TMEM53-202ENST00000372237 MRC2Q9UBG0 1479 aa27.79■■■□□ 2.04
TMEM53-202ENST00000372237 PHLDB1Q86UU1 1377 aa27.77■■■□□ 2.04
TMEM53-202ENST00000372237 GAPVD1Q14C86 1478 aa27.77■■■□□ 2.04
TMEM53-202ENST00000372237 CFAP43Q8NDM7 1665 aa27.77■■■□□ 2.04
TMEM53-202ENST00000372237 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
TMEM53-202ENST00000372237 PCF11O94913 1555 aaKnown RBP27.77■■■□□ 2.04
TMEM53-202ENST00000372237 P3H3Q8IVL6 736 aa27.76■■■□□ 2.03
TMEM53-202ENST00000372237 CUL7Q14999 1698 aa27.75■■■□□ 2.03
TMEM53-202ENST00000372237 SETD5Q9C0A6 1442 aa27.74■■■□□ 2.03
TMEM53-202ENST00000372237 TARBP1Q13395 1621 aaKnown RBP27.74■■■□□ 2.03
TMEM53-202ENST00000372237 MAPKBP1O60336 1514 aa27.73■■■□□ 2.03
TMEM53-202ENST00000372237 ATP1B4Q9UN42 357 aaPredicted RBP27.71■■■□□ 2.03
TMEM53-202ENST00000372237 FAM50AQ14320 339 aaKnown RBP27.7■■■□□ 2.02
TMEM53-202ENST00000372237 FHOD3Q2V2M9 1422 aa27.68■■■□□ 2.02
TMEM53-202ENST00000372237 EFCAB5A4FU69 1503 aa27.67■■■□□ 2.02
TMEM53-202ENST00000372237 FYCO1Q9BQS8 1478 aa27.65■■■□□ 2.02
TMEM53-202ENST00000372237 CTTNBP2Q8WZ74 1663 aa27.62■■■□□ 2.01
TMEM53-202ENST00000372237 WDR62O43379 1518 aa27.61■■■□□ 2.01
TMEM53-202ENST00000372237 CASKIN1Q8WXD9 1431 aa27.6■■■□□ 2.01
TMEM53-202ENST00000372237 AQRO60306 1485 aaKnown RBP eCLIP27.58■■■□□ 2.01
TMEM53-202ENST00000372237 ERCC6Q03468 1493 aa27.56■■■□□ 2
TMEM53-202ENST00000372237 IFT140Q96RY7 1462 aa27.53■■■□□ 2
TMEM53-202ENST00000372237 FMN1Q68DA7 1419 aa27.52■■■□□ 2
TMEM53-202ENST00000372237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.51■■□□□ 1.99
TMEM53-202ENST00000372237 SIN3AQ96ST3 1273 aa27.5■■□□□ 1.99
TMEM53-202ENST00000372237 ZNF608Q9ULD9 1512 aaPredicted RBP27.47■■□□□ 1.99
TMEM53-202ENST00000372237 GRIN2BQ13224 1484 aa27.46■■□□□ 1.99
TMEM53-202ENST00000372237 PBRM1Q86U86 1689 aa27.45■■□□□ 1.98
TMEM53-202ENST00000372237 SNAPC4Q5SXM2 1469 aa27.43■■□□□ 1.98
TMEM53-202ENST00000372237 TIMELESSQ9UNS1 1208 aa27.43■■□□□ 1.98
TMEM53-202ENST00000372237 FGD6Q6ZV73 1430 aa27.41■■□□□ 1.98
TMEM53-202ENST00000372237 THOC2Q8NI27 1593 aaKnown RBP27.4■■□□□ 1.98
TMEM53-202ENST00000372237 MTUS2Q5JR59 1369 aa27.4■■□□□ 1.98
TMEM53-202ENST00000372237 ADAMTS12P58397 1594 aa27.37■■□□□ 1.97
TMEM53-202ENST00000372237 SAMD9Q5K651 1589 aa27.37■■□□□ 1.97
TMEM53-202ENST00000372237 LRRIQ1Q96JM4 1722 aa27.31■■□□□ 1.96
TMEM53-202ENST00000372237 DDX10Q13206 875 aaKnown RBP27.3■■□□□ 1.96
TMEM53-202ENST00000372237 SUPT16HQ9Y5B9 1047 aaKnown RBP27.3■■□□□ 1.96
TMEM53-202ENST00000372237 PPP1R15AO75807 674 aaPredicted RBP27.29■■□□□ 1.96
TMEM53-202ENST00000372237 CCDC18Q5T9S5 1454 aa27.29■■□□□ 1.96
TMEM53-202ENST00000372237 KCNH8Q96L42 1107 aa27.28■■□□□ 1.96
TMEM53-202ENST00000372237 EIF4G3O43432 1585 aaKnown RBP27.26■■□□□ 1.95
TMEM53-202ENST00000372237 NCOA2Q15596 1464 aa27.26■■□□□ 1.95
TMEM53-202ENST00000372237 HFM1A2PYH4 1435 aa27.26■■□□□ 1.95
TMEM53-202ENST00000372237 PTPRKQ15262 1439 aa27.24■■□□□ 1.95
TMEM53-202ENST00000372237 MYOM3Q5VTT5 1437 aa27.24■■□□□ 1.95
TMEM53-202ENST00000372237 SUPT6HQ7KZ85 1726 aaKnown RBP27.23■■□□□ 1.95
TMEM53-202ENST00000372237 PTPN23Q9H3S7 1636 aa27.22■■□□□ 1.95
TMEM53-202ENST00000372237 UACAQ9BZF9 1416 aa27.22■■□□□ 1.95
TMEM53-202ENST00000372237 EHBP1L1Q8N3D4 1523 aa27.21■■□□□ 1.95
TMEM53-202ENST00000372237 TONSLQ96HA7 1378 aa27.21■■□□□ 1.95
TMEM53-202ENST00000372237 IQGAP2Q13576 1575 aa27.2■■□□□ 1.94
TMEM53-202ENST00000372237 HIRIP3Q9BW71 556 aaPredicted RBP27.18■■□□□ 1.94
TMEM53-202ENST00000372237 NAIPQ13075 1403 aa27.16■■□□□ 1.94
TMEM53-202ENST00000372237 GRIN2AQ12879 1464 aa27.14■■□□□ 1.93
TMEM53-202ENST00000372237 MAGI1Q96QZ7 1491 aaPredicted RBP27.13■■□□□ 1.93
TMEM53-202ENST00000372237 UGGT2Q9NYU1 1516 aa27.12■■□□□ 1.93
TMEM53-202ENST00000372237 KIAA0586Q9BVV6 1533 aa27.11■■□□□ 1.93
TMEM53-202ENST00000372237 CHMP7Q8WUX9 453 aaPredicted RBP27.08■■□□□ 1.93
TMEM53-202ENST00000372237 ARHGEF11O15085 1522 aa27.08■■□□□ 1.93
TMEM53-202ENST00000372237 MAGI3Q5TCQ9 1506 aa27.08■■□□□ 1.93
TMEM53-202ENST00000372237 SYNJ2O15056 1496 aa27.06■■□□□ 1.92
TMEM53-202ENST00000372237 ANP32CO43423 234 aa27.06■■□□□ 1.92
TMEM53-202ENST00000372237 HECW1Q76N89 1606 aa27.05■■□□□ 1.92
TMEM53-202ENST00000372237 CCER2I3L3R5 266 aa27.03■■□□□ 1.92
TMEM53-202ENST00000372237 MYT1Q01538 1121 aa27.02■■□□□ 1.92
TMEM53-202ENST00000372237 FBLN2P98095 1184 aa27.01■■□□□ 1.91
TMEM53-202ENST00000372237 TCOF1Q13428 1488 aaKnown RBP27■■□□□ 1.91
TMEM53-202ENST00000372237 RRP7BPQ9NSQ0 103 aa26.99■■□□□ 1.91
TMEM53-202ENST00000372237 EPRSP07814 1512 aaKnown RBP26.98■■□□□ 1.91
TMEM53-202ENST00000372237 DISP1Q96F81 1524 aa26.97■■□□□ 1.91
TMEM53-202ENST00000372237 CHIC2Q9UKJ5 165 aa26.97■■□□□ 1.91
TMEM53-202ENST00000372237 GCC2Q8IWJ2 1684 aa26.96■■□□□ 1.91
TMEM53-202ENST00000372237 CEP170Q5SW79 1584 aa26.94■■□□□ 1.9
TMEM53-202ENST00000372237 KDM5BQ9UGL1 1544 aa26.92■■□□□ 1.9
TMEM53-202ENST00000372237 KIAA0556O60303 1618 aa26.91■■□□□ 1.9
TMEM53-202ENST00000372237 NUP160Q12769 1436 aa26.91■■□□□ 1.9
TMEM53-202ENST00000372237 CDK13Q14004 1512 aaKnown RBP26.91■■□□□ 1.9
TMEM53-202ENST00000372237 AKNAQ7Z591 1439 aa26.91■■□□□ 1.9
TMEM53-202ENST00000372237 TRIM52Q96A61 297 aa26.9■■□□□ 1.9
TMEM53-202ENST00000372237 MIA2Q96PC5 1412 aa26.9■■□□□ 1.9
TMEM53-202ENST00000372237 FKBP8Q14318 412 aa26.85■■□□□ 1.89
TMEM53-202ENST00000372237 ARID3CA6NKF2 412 aa26.85■■□□□ 1.89
TMEM53-202ENST00000372237 DENND4BO75064 1496 aaPredicted RBP26.84■■□□□ 1.89
TMEM53-202ENST00000372237 JPH4Q96JJ6 628 aa26.84■■□□□ 1.89
TMEM53-202ENST00000372237 KDM6BO15054 1643 aa26.84■■□□□ 1.89
TMEM53-202ENST00000372237 BCANQ96GW7 911 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms