RNA–Protein interactions for RNA: ENST00000371560.4

GRIN1-207, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GRIN1, Length 3,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-207ENST00000371560 PRXQ9BXM0 1461 aa19.73■□□□□ 0.75
GRIN1-207ENST00000371560 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
GRIN1-207ENST00000371560 CCNB3Q8WWL7 1395 aa19.7■□□□□ 0.74
GRIN1-207ENST00000371560 DDX10Q13206 875 aaKnown RBP19.68■□□□□ 0.74
GRIN1-207ENST00000371560 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
GRIN1-207ENST00000371560 TDRD9Q8NDG6 1382 aaKnown RBP19.67■□□□□ 0.74
GRIN1-207ENST00000371560 SIN3AQ96ST3 1273 aa19.66■□□□□ 0.74
GRIN1-207ENST00000371560 FGD5Q6ZNL6 1462 aa19.66■□□□□ 0.74
GRIN1-207ENST00000371560 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
GRIN1-207ENST00000371560 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
GRIN1-207ENST00000371560 NESP48681 1621 aa19.62■□□□□ 0.73
GRIN1-207ENST00000371560 DHX57Q6P158 1386 aaKnown RBP19.6■□□□□ 0.73
GRIN1-207ENST00000371560 CHIC2Q9UKJ5 165 aa19.6■□□□□ 0.73
GRIN1-207ENST00000371560 ARHGAP35Q9NRY4 1499 aa19.6■□□□□ 0.73
GRIN1-207ENST00000371560 FBLN2P98095 1184 aa19.59■□□□□ 0.73
GRIN1-207ENST00000371560 FHOD3Q2V2M9 1422 aa19.58■□□□□ 0.73
GRIN1-207ENST00000371560 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
GRIN1-207ENST00000371560 MTUS2Q5JR59 1369 aa19.55■□□□□ 0.72
GRIN1-207ENST00000371560 RBM19Q9Y4C8 960 aaKnown RBP19.55■□□□□ 0.72
GRIN1-207ENST00000371560 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
GRIN1-207ENST00000371560 RAB3GAP2Q9H2M9 1393 aa19.54■□□□□ 0.72
GRIN1-207ENST00000371560 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
GRIN1-207ENST00000371560 NBR1Q14596 966 aa19.51■□□□□ 0.71
GRIN1-207ENST00000371560 RRP7BPQ9NSQ0 103 aa19.48■□□□□ 0.71
GRIN1-207ENST00000371560 SENP3-EIF4A1A0A087X0R7 540 aa19.48■□□□□ 0.71
GRIN1-207ENST00000371560 CLSPNQ9HAW4 1339 aa19.47■□□□□ 0.71
GRIN1-207ENST00000371560 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
GRIN1-207ENST00000371560 PHLDB1Q86UU1 1377 aa19.45■□□□□ 0.7
GRIN1-207ENST00000371560 SETD5Q9C0A6 1442 aa19.41■□□□□ 0.7
GRIN1-207ENST00000371560 RRBP1Q9P2E9 1410 aaKnown RBP19.38■□□□□ 0.69
GRIN1-207ENST00000371560 POLA1P09884 1462 aaPredicted RBP19.38■□□□□ 0.69
GRIN1-207ENST00000371560 CDK11AQ9UQ88 783 aaPredicted RBP19.37■□□□□ 0.69
GRIN1-207ENST00000371560 ZNF777Q9ULD5 760 aaPredicted RBP19.36■□□□□ 0.69
GRIN1-207ENST00000371560 TONSLQ96HA7 1378 aa19.35■□□□□ 0.69
GRIN1-207ENST00000371560 TOPBP1Q92547 1522 aa19.34■□□□□ 0.69
GRIN1-207ENST00000371560 POLR3GLQ9BT43 218 aa19.34■□□□□ 0.69
GRIN1-207ENST00000371560 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
GRIN1-207ENST00000371560 LRRC9Q6ZRR7 1453 aa19.33■□□□□ 0.69
GRIN1-207ENST00000371560 RTN4Q9NQC3 1192 aaKnown RBP19.33■□□□□ 0.69
GRIN1-207ENST00000371560 HNRNPUQ00839 825 aaKnown RBP eCLIP19.32■□□□□ 0.68
GRIN1-207ENST00000371560 ANP32CO43423 234 aa19.32■□□□□ 0.68
GRIN1-207ENST00000371560 ZNF326Q5BKZ1 582 aaKnown RBP19.26■□□□□ 0.67
GRIN1-207ENST00000371560 CHMP7Q8WUX9 453 aaPredicted RBP19.26■□□□□ 0.67
GRIN1-207ENST00000371560 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
GRIN1-207ENST00000371560 FOXD1Q16676 465 aa19.25■□□□□ 0.67
GRIN1-207ENST00000371560 FMN1Q68DA7 1419 aa19.25■□□□□ 0.67
GRIN1-207ENST00000371560 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.67
GRIN1-207ENST00000371560 TIAM1Q13009 1591 aa19.22■□□□□ 0.67
GRIN1-207ENST00000371560 MSH5O43196 834 aa19.2■□□□□ 0.66
GRIN1-207ENST00000371560 PPP1R15AO75807 674 aaPredicted RBP19.2■□□□□ 0.66
GRIN1-207ENST00000371560 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
GRIN1-207ENST00000371560 ABCA10Q8WWZ4 1543 aa19.19■□□□□ 0.66
GRIN1-207ENST00000371560 DEKP35659 375 aaKnown RBP19.19■□□□□ 0.66
GRIN1-207ENST00000371560 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
GRIN1-207ENST00000371560 NPM2Q86SE8 214 aaKnown RBP19.17■□□□□ 0.66
GRIN1-207ENST00000371560 CCDC136Q96JN2 1154 aa19.16■□□□□ 0.66
GRIN1-207ENST00000371560 B4GALNT3Q6L9W6 998 aa19.15■□□□□ 0.66
GRIN1-207ENST00000371560 FAM9BQ8IZU0 186 aa19.15■□□□□ 0.66
GRIN1-207ENST00000371560 CASKIN1Q8WXD9 1431 aa19.15■□□□□ 0.66
GRIN1-207ENST00000371560 PCF11O94913 1555 aaKnown RBP19.14■□□□□ 0.65
GRIN1-207ENST00000371560 RTL5Q5HYW3 569 aaPredicted RBP19.13■□□□□ 0.65
GRIN1-207ENST00000371560 FGD6Q6ZV73 1430 aa19.12■□□□□ 0.65
GRIN1-207ENST00000371560 SLC4A1APQ9BWU0 796 aaKnown RBP19.1■□□□□ 0.65
GRIN1-207ENST00000371560 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.08■□□□□ 0.64
GRIN1-207ENST00000371560 ZNF644Q9H582 1327 aaPredicted RBP19.07■□□□□ 0.64
GRIN1-207ENST00000371560 PRKCSHP14314 528 aaPredicted RBP19.07■□□□□ 0.64
GRIN1-207ENST00000371560 CFDP1Q9UEE9 299 aaPredicted RBP19.07■□□□□ 0.64
GRIN1-207ENST00000371560 FYCO1Q9BQS8 1478 aa19.07■□□□□ 0.64
GRIN1-207ENST00000371560 ANO8Q9HCE9 1232 aaPredicted RBP19.06■□□□□ 0.64
GRIN1-207ENST00000371560 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
GRIN1-207ENST00000371560 NCOA2Q15596 1464 aa19.04■□□□□ 0.64
GRIN1-207ENST00000371560 MPHOSPH9Q99550 1183 aa19.03■□□□□ 0.64
GRIN1-207ENST00000371560 TIMELESSQ9UNS1 1208 aa19.03■□□□□ 0.64
GRIN1-207ENST00000371560 EIF5BO60841 1220 aaKnown RBP19.03■□□□□ 0.64
GRIN1-207ENST00000371560 CCDC18Q5T9S5 1454 aa19.03■□□□□ 0.64
GRIN1-207ENST00000371560 WDR97A6NE52 1622 aa19■□□□□ 0.63
GRIN1-207ENST00000371560 EIF4G2P78344 907 aaKnown RBP eCLIP19■□□□□ 0.63
GRIN1-207ENST00000371560 MYOM3Q5VTT5 1437 aa19■□□□□ 0.63
GRIN1-207ENST00000371560 HSPA5P11021 654 aaKnown RBP18.99■□□□□ 0.63
GRIN1-207ENST00000371560 L3MBTL2Q969R5 705 aa18.98■□□□□ 0.63
GRIN1-207ENST00000371560 MAPKBP1O60336 1514 aa18.98■□□□□ 0.63
GRIN1-207ENST00000371560 LAMC3Q9Y6N6 1575 aa18.98■□□□□ 0.63
GRIN1-207ENST00000371560 EFCAB5A4FU69 1503 aa18.98■□□□□ 0.63
GRIN1-207ENST00000371560 PTPRKQ15262 1439 aa18.97■□□□□ 0.63
GRIN1-207ENST00000371560 MAP3K1Q13233 1512 aa18.97■□□□□ 0.63
GRIN1-207ENST00000371560 KDM2AQ9Y2K7 1162 aa18.97■□□□□ 0.63
GRIN1-207ENST00000371560 PLEKHD1A6NEE1 506 aa18.96■□□□□ 0.63
GRIN1-207ENST00000371560 SALL2Q9Y467 1007 aaPredicted RBP18.95■□□□□ 0.62
GRIN1-207ENST00000371560 JPH4Q96JJ6 628 aa18.93■□□□□ 0.62
GRIN1-207ENST00000371560 PRDM2Q13029 1718 aa18.92■□□□□ 0.62
GRIN1-207ENST00000371560 MYT1LQ9UL68 1186 aa18.92■□□□□ 0.62
GRIN1-207ENST00000371560 LAS1LQ9Y4W2 734 aaKnown RBP18.92■□□□□ 0.62
GRIN1-207ENST00000371560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.91■□□□□ 0.62
GRIN1-207ENST00000371560 ZNF608Q9ULD9 1512 aaPredicted RBP18.91■□□□□ 0.62
GRIN1-207ENST00000371560 CUL7Q14999 1698 aa18.9■□□□□ 0.62
GRIN1-207ENST00000371560 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
GRIN1-207ENST00000371560 TSPY4P0CV99 314 aa18.89■□□□□ 0.62
GRIN1-207ENST00000371560 TSPY10P0CW01 314 aa18.89■□□□□ 0.62
GRIN1-207ENST00000371560 UACAQ9BZF9 1416 aa18.89■□□□□ 0.62
GRIN1-207ENST00000371560 NAIPQ13075 1403 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms