RNA–Protein interactions for RNA: ENST00000371209.5

TCTN3-202, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 1,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-202ENST00000371209 FHAD1B1AJZ9 1412 aa17.25■□□□□ 0.35
TCTN3-202ENST00000371209 KIF21BO75037 1637 aa17.23■□□□□ 0.35
TCTN3-202ENST00000371209 SYNJ2O15056 1496 aa17.22■□□□□ 0.35
TCTN3-202ENST00000371209 RAPGEF2Q9Y4G8 1499 aa17.21■□□□□ 0.35
TCTN3-202ENST00000371209 GRIN2AQ12879 1464 aa17.18■□□□□ 0.34
TCTN3-202ENST00000371209 HOXD11P31277 338 aaPredicted RBP17.18■□□□□ 0.34
TCTN3-202ENST00000371209 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
TCTN3-202ENST00000371209 CHD1O14646 1710 aa17.17■□□□□ 0.34
TCTN3-202ENST00000371209 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
TCTN3-202ENST00000371209 FBLN2P98095 1184 aa17.16■□□□□ 0.34
TCTN3-202ENST00000371209 CHMP7Q8WUX9 453 aaPredicted RBP17.16■□□□□ 0.34
TCTN3-202ENST00000371209 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
TCTN3-202ENST00000371209 LOC105371045A0A1W2PR82 267 aa17.12■□□□□ 0.33
TCTN3-202ENST00000371209 CEP170Q5SW79 1584 aa17.1■□□□□ 0.33
TCTN3-202ENST00000371209 NUP160Q12769 1436 aa17.08■□□□□ 0.32
TCTN3-202ENST00000371209 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
TCTN3-202ENST00000371209 CTTNBP2Q8WZ74 1663 aa17.04■□□□□ 0.32
TCTN3-202ENST00000371209 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
TCTN3-202ENST00000371209 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
TCTN3-202ENST00000371209 TNIKQ9UKE5 1360 aa17.01■□□□□ 0.31
TCTN3-202ENST00000371209 KIAA0586Q9BVV6 1533 aa17.01■□□□□ 0.31
TCTN3-202ENST00000371209 CLASP1Q7Z460 1538 aa17■□□□□ 0.31
TCTN3-202ENST00000371209 IQGAP2Q13576 1575 aa16.98■□□□□ 0.31
TCTN3-202ENST00000371209 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
TCTN3-202ENST00000371209 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
TCTN3-202ENST00000371209 UGGT2Q9NYU1 1516 aa16.91■□□□□ 0.3
TCTN3-202ENST00000371209 RANGAP1P46060 587 aaPredicted RBP16.9■□□□□ 0.3
TCTN3-202ENST00000371209 CEP162Q5TB80 1403 aa16.89■□□□□ 0.29
TCTN3-202ENST00000371209 JPH4Q96JJ6 628 aa16.89■□□□□ 0.29
TCTN3-202ENST00000371209 SAMD9Q5K651 1589 aa16.86■□□□□ 0.29
TCTN3-202ENST00000371209 DISP1Q96F81 1524 aa16.85■□□□□ 0.29
TCTN3-202ENST00000371209 CLIP1P30622 1438 aa16.85■□□□□ 0.29
TCTN3-202ENST00000371209 ARHGAP35Q9NRY4 1499 aa16.85■□□□□ 0.29
TCTN3-202ENST00000371209 PRG4Q92954 1404 aaPredicted RBP16.85■□□□□ 0.29
TCTN3-202ENST00000371209 ERCC6L2Q5T890 1561 aa16.84■□□□□ 0.29
TCTN3-202ENST00000371209 EFCAB5A4FU69 1503 aa16.83■□□□□ 0.29
TCTN3-202ENST00000371209 KIAA0556O60303 1618 aa16.82■□□□□ 0.28
TCTN3-202ENST00000371209 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
TCTN3-202ENST00000371209 P3H3Q8IVL6 736 aa16.8■□□□□ 0.28
TCTN3-202ENST00000371209 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
TCTN3-202ENST00000371209 CARMIL2Q6F5E8 1435 aa16.78■□□□□ 0.28
TCTN3-202ENST00000371209 ARAP1Q96P48 1450 aa16.78■□□□□ 0.28
TCTN3-202ENST00000371209 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
TCTN3-202ENST00000371209 CACNB1Q02641 598 aaPredicted RBP16.73■□□□□ 0.27
TCTN3-202ENST00000371209 RIMBP3CA6NJZ7 1639 aa16.7■□□□□ 0.26
TCTN3-202ENST00000371209 RIMBP3BA6NNM3 1639 aa16.7■□□□□ 0.26
TCTN3-202ENST00000371209 RIMBP3Q9UFD9 1639 aa16.7■□□□□ 0.26
TCTN3-202ENST00000371209 RNF39Q9H2S5 420 aa16.7■□□□□ 0.26
TCTN3-202ENST00000371209 TTBK1Q5TCY1 1321 aaPredicted RBP16.69■□□□□ 0.26
TCTN3-202ENST00000371209 PTPRGP23470 1445 aa16.67■□□□□ 0.26
TCTN3-202ENST00000371209 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
TCTN3-202ENST00000371209 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
TCTN3-202ENST00000371209 VPS8Q8N3P4 1428 aa16.64■□□□□ 0.25
TCTN3-202ENST00000371209 PLB1Q6P1J6 1458 aa16.63■□□□□ 0.25
TCTN3-202ENST00000371209 PCF11O94913 1555 aaKnown RBP16.63■□□□□ 0.25
TCTN3-202ENST00000371209 DNAJC5Q9H3Z4 198 aa16.62■□□□□ 0.25
TCTN3-202ENST00000371209 ABCA8O94911 1581 aa16.62■□□□□ 0.25
TCTN3-202ENST00000371209 CASKIN1Q8WXD9 1431 aa16.6■□□□□ 0.25
TCTN3-202ENST00000371209 RAPGEF6Q8TEU7 1601 aa16.6■□□□□ 0.25
TCTN3-202ENST00000371209 UACAQ9BZF9 1416 aa16.58■□□□□ 0.25
TCTN3-202ENST00000371209 FYCO1Q9BQS8 1478 aa16.58■□□□□ 0.24
TCTN3-202ENST00000371209 NUP153P49790 1475 aaKnown RBP16.56■□□□□ 0.24
TCTN3-202ENST00000371209 ABCC2Q92887 1545 aa16.56■□□□□ 0.24
TCTN3-202ENST00000371209 ADCY10Q96PN6 1610 aa16.56■□□□□ 0.24
TCTN3-202ENST00000371209 CYB5RLQ6IPT4 315 aa16.55■□□□□ 0.24
TCTN3-202ENST00000371209 HECW1Q76N89 1606 aa16.55■□□□□ 0.24
TCTN3-202ENST00000371209 UHRF1BP1LA0JNW5 1464 aa16.54■□□□□ 0.24
TCTN3-202ENST00000371209 LRRIQ1Q96JM4 1722 aa16.54■□□□□ 0.24
TCTN3-202ENST00000371209 ATP1B4Q9UN42 357 aaPredicted RBP16.53■□□□□ 0.24
TCTN3-202ENST00000371209 ARID3CA6NKF2 412 aa16.51■□□□□ 0.23
TCTN3-202ENST00000371209 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
TCTN3-202ENST00000371209 CDK13Q14004 1512 aaKnown RBP16.5■□□□□ 0.23
TCTN3-202ENST00000371209 ATP10BO94823 1461 aa16.48■□□□□ 0.23
TCTN3-202ENST00000371209 KDM5BQ9UGL1 1544 aa16.48■□□□□ 0.23
TCTN3-202ENST00000371209 CFAP43Q8NDM7 1665 aa16.46■□□□□ 0.23
TCTN3-202ENST00000371209 CCDC18Q5T9S5 1454 aa16.46■□□□□ 0.23
TCTN3-202ENST00000371209 ZCCHC11Q5TAX3 1644 aaKnown RBP16.46■□□□□ 0.23
TCTN3-202ENST00000371209 TIAM1Q13009 1591 aa16.46■□□□□ 0.23
TCTN3-202ENST00000371209 MAP3K1Q13233 1512 aa16.43■□□□□ 0.22
TCTN3-202ENST00000371209 C1QBPQ07021 282 aaKnown RBP16.42■□□□□ 0.22
TCTN3-202ENST00000371209 MAGI3Q5TCQ9 1506 aa16.41■□□□□ 0.22
TCTN3-202ENST00000371209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
TCTN3-202ENST00000371209 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
TCTN3-202ENST00000371209 APLP2Q06481 763 aa16.39■□□□□ 0.21
TCTN3-202ENST00000371209 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
TCTN3-202ENST00000371209 KCNA4P22459 653 aa16.38■□□□□ 0.21
TCTN3-202ENST00000371209 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
TCTN3-202ENST00000371209 NPM1P06748 294 aaKnown RBP eCLIP16.37■□□□□ 0.21
TCTN3-202ENST00000371209 PPARGC1BQ86YN6 1023 aaKnown RBP16.35■□□□□ 0.21
TCTN3-202ENST00000371209 ASXL2Q76L83 1435 aa16.34■□□□□ 0.21
TCTN3-202ENST00000371209 MAPKBP1O60336 1514 aa16.34■□□□□ 0.21
TCTN3-202ENST00000371209 EHBP1L1Q8N3D4 1523 aa16.34■□□□□ 0.21
TCTN3-202ENST00000371209 MTUS2Q5JR59 1369 aa16.34■□□□□ 0.21
TCTN3-202ENST00000371209 TROQ12816 1431 aaPredicted RBP16.33■□□□□ 0.21
TCTN3-202ENST00000371209 PLEKHD1A6NEE1 506 aa16.33■□□□□ 0.2
TCTN3-202ENST00000371209 CDK11AQ9UQ88 783 aaPredicted RBP16.33■□□□□ 0.2
TCTN3-202ENST00000371209 WDR7Q9Y4E6 1490 aa16.33■□□□□ 0.2
TCTN3-202ENST00000371209 KIF14Q15058 1648 aa16.3■□□□□ 0.2
TCTN3-202ENST00000371209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.2
TCTN3-202ENST00000371209 SUPT6HQ7KZ85 1726 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms