RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 MSH5O43196 834 aa7.04□□□□□ -1.28
SGIP1-204ENST00000371039 LRRIQ1Q96JM4 1722 aa7.03□□□□□ -1.28
SGIP1-204ENST00000371039 PPP1R15AO75807 674 aaPredicted RBP7.02□□□□□ -1.29
SGIP1-204ENST00000371039 ANP32EQ9BTT0 268 aa7.02□□□□□ -1.29
SGIP1-204ENST00000371039 TIAM1Q13009 1591 aa7.02□□□□□ -1.29
SGIP1-204ENST00000371039 RAB3GAP2Q9H2M9 1393 aa7.01□□□□□ -1.29
SGIP1-204ENST00000371039 CFAP43Q8NDM7 1665 aa7□□□□□ -1.29
SGIP1-204ENST00000371039 PHLDB1Q86UU1 1377 aa7□□□□□ -1.29
SGIP1-204ENST00000371039 KLHL34Q8N239 644 aa6.99□□□□□ -1.29
SGIP1-204ENST00000371039 DENND4BO75064 1496 aaPredicted RBP6.99□□□□□ -1.29
SGIP1-204ENST00000371039 TIMELESSQ9UNS1 1208 aa6.99□□□□□ -1.29
SGIP1-204ENST00000371039 CCNB3Q8WWL7 1395 aa6.99□□□□□ -1.29
SGIP1-204ENST00000371039 RANGAP1P46060 587 aaPredicted RBP6.99□□□□□ -1.29
SGIP1-204ENST00000371039 PRDM2Q13029 1718 aa6.97□□□□□ -1.29
SGIP1-204ENST00000371039 MAP3K1Q13233 1512 aa6.97□□□□□ -1.29
SGIP1-204ENST00000371039 PCF11O94913 1555 aaKnown RBP6.97□□□□□ -1.29
SGIP1-204ENST00000371039 SIN3AQ96ST3 1273 aa6.96□□□□□ -1.29
SGIP1-204ENST00000371039 PTPRKQ15262 1439 aa6.96□□□□□ -1.3
SGIP1-204ENST00000371039 LRRC9Q6ZRR7 1453 aa6.96□□□□□ -1.3
SGIP1-204ENST00000371039 AQRO60306 1485 aaKnown RBP eCLIP6.95□□□□□ -1.3
SGIP1-204ENST00000371039 RBM19Q9Y4C8 960 aaKnown RBP6.94□□□□□ -1.3
SGIP1-204ENST00000371039 PODXL2Q9NZ53 605 aa6.94□□□□□ -1.3
SGIP1-204ENST00000371039 BCANQ96GW7 911 aa6.93□□□□□ -1.3
SGIP1-204ENST00000371039 CFTRP13569 1480 aa6.93□□□□□ -1.3
SGIP1-204ENST00000371039 IGF1RP08069 1367 aa6.93□□□□□ -1.3
SGIP1-204ENST00000371039 HMGXB3Q12766 1538 aa6.92□□□□□ -1.3
SGIP1-204ENST00000371039 HIRIP3Q9BW71 556 aaPredicted RBP6.92□□□□□ -1.3
SGIP1-204ENST00000371039 KDM6BO15054 1643 aa6.92□□□□□ -1.3
SGIP1-204ENST00000371039 SETD5Q9C0A6 1442 aa6.91□□□□□ -1.3
SGIP1-204ENST00000371039 CC2D2AQ9P2K1 1620 aa6.91□□□□□ -1.3
SGIP1-204ENST00000371039 FKBP8Q14318 412 aa6.91□□□□□ -1.3
SGIP1-204ENST00000371039 ITGAEP38570 1179 aa6.91□□□□□ -1.3
SGIP1-204ENST00000371039 DDX10Q13206 875 aaKnown RBP6.9□□□□□ -1.3
SGIP1-204ENST00000371039 NCAPD3P42695 1498 aa6.9□□□□□ -1.31
SGIP1-204ENST00000371039 UBE2Q2Q8WVN8 375 aa6.9□□□□□ -1.31
SGIP1-204ENST00000371039 SNAPC4Q5SXM2 1469 aa6.89□□□□□ -1.31
SGIP1-204ENST00000371039 CCDC184Q52MB2 194 aa6.88□□□□□ -1.31
SGIP1-204ENST00000371039 KIF27Q86VH2 1401 aa6.88□□□□□ -1.31
SGIP1-204ENST00000371039 PTPN23Q9H3S7 1636 aa6.88□□□□□ -1.31
SGIP1-204ENST00000371039 MAGI3Q5TCQ9 1506 aa6.87□□□□□ -1.31
SGIP1-204ENST00000371039 TRIM52Q96A61 297 aa6.87□□□□□ -1.31
SGIP1-204ENST00000371039 ARHGEF11O15085 1522 aa6.85□□□□□ -1.31
SGIP1-204ENST00000371039 NCOA2Q15596 1464 aa6.85□□□□□ -1.31
SGIP1-204ENST00000371039 TULP1O00294 542 aaPredicted RBP6.85□□□□□ -1.31
SGIP1-204ENST00000371039 CTTNBP2Q8WZ74 1663 aa6.84□□□□□ -1.31
SGIP1-204ENST00000371039 FGD5Q6ZNL6 1462 aa6.84□□□□□ -1.31
SGIP1-204ENST00000371039 C11orf95C9JLR9 678 aaPredicted RBP6.84□□□□□ -1.31
SGIP1-204ENST00000371039 POLR1AO95602 1720 aaPredicted RBP6.84□□□□□ -1.31
SGIP1-204ENST00000371039 CCER2I3L3R5 266 aa6.83□□□□□ -1.32
SGIP1-204ENST00000371039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.83□□□□□ -1.32
SGIP1-204ENST00000371039 SAMD9Q5K651 1589 aa6.83□□□□□ -1.32
SGIP1-204ENST00000371039 NAIPQ13075 1403 aa6.83□□□□□ -1.32
SGIP1-204ENST00000371039 FHOD3Q2V2M9 1422 aa6.83□□□□□ -1.32
SGIP1-204ENST00000371039 DNAJC5Q9H3Z4 198 aa6.82□□□□□ -1.32
SGIP1-204ENST00000371039 WASHC2AQ641Q2 1341 aa6.82□□□□□ -1.32
SGIP1-204ENST00000371039 ERCC6Q03468 1493 aa6.82□□□□□ -1.32
SGIP1-204ENST00000371039 HFM1A2PYH4 1435 aa6.82□□□□□ -1.32
SGIP1-204ENST00000371039 GCC2Q8IWJ2 1684 aa6.82□□□□□ -1.32
SGIP1-204ENST00000371039 FYCO1Q9BQS8 1478 aa6.81□□□□□ -1.32
SGIP1-204ENST00000371039 CCDC18Q5T9S5 1454 aa6.81□□□□□ -1.32
SGIP1-204ENST00000371039 HOMEZQ8IX15 550 aa6.81□□□□□ -1.32
SGIP1-204ENST00000371039 ABCA5Q8WWZ7 1642 aa6.81□□□□□ -1.32
SGIP1-204ENST00000371039 FANCIQ9NVI1 1328 aa6.81□□□□□ -1.32
SGIP1-204ENST00000371039 FGD6Q6ZV73 1430 aa6.81□□□□□ -1.32
SGIP1-204ENST00000371039 AMER1Q5JTC6 1135 aaPredicted RBP6.81□□□□□ -1.32
SGIP1-204ENST00000371039 HECW1Q76N89 1606 aa6.81□□□□□ -1.32
SGIP1-204ENST00000371039 BCORL1Q5H9F3 1711 aa6.8□□□□□ -1.32
SGIP1-204ENST00000371039 CARMIL1Q5VZK9 1371 aa6.8□□□□□ -1.32
SGIP1-204ENST00000371039 CASKIN1Q8WXD9 1431 aa6.8□□□□□ -1.32
SGIP1-204ENST00000371039 IRX6P78412 446 aaPredicted RBP6.8□□□□□ -1.32
SGIP1-204ENST00000371039 GRIN2BQ13224 1484 aa6.79□□□□□ -1.32
SGIP1-204ENST00000371039 FHAD1B1AJZ9 1412 aa6.79□□□□□ -1.32
SGIP1-204ENST00000371039 UACAQ9BZF9 1416 aa6.79□□□□□ -1.32
SGIP1-204ENST00000371039 SPATA31E1Q6ZUB1 1445 aa6.79□□□□□ -1.32
SGIP1-204ENST00000371039 RAD54L2Q9Y4B4 1467 aa6.79□□□□□ -1.32
SGIP1-204ENST00000371039 UGGT2Q9NYU1 1516 aa6.77□□□□□ -1.33
SGIP1-204ENST00000371039 EFCAB5A4FU69 1503 aa6.76□□□□□ -1.33
SGIP1-204ENST00000371039 TEX14Q8IWB6 1497 aa6.76□□□□□ -1.33
SGIP1-204ENST00000371039 ABCA10Q8WWZ4 1543 aa6.76□□□□□ -1.33
SGIP1-204ENST00000371039 PAK3O75914 559 aaPredicted RBP6.76□□□□□ -1.33
SGIP1-204ENST00000371039 PKNOX2Q96KN3 472 aa6.76□□□□□ -1.33
SGIP1-204ENST00000371039 NCOA1Q15788 1441 aa6.76□□□□□ -1.33
SGIP1-204ENST00000371039 PDIA4P13667 645 aaKnown RBP6.75□□□□□ -1.33
SGIP1-204ENST00000371039 POLA1P09884 1462 aaPredicted RBP6.75□□□□□ -1.33
SGIP1-204ENST00000371039 TCOF1Q13428 1488 aaKnown RBP6.75□□□□□ -1.33
SGIP1-204ENST00000371039 AEBP2Q6ZN18 517 aaPredicted RBP6.75□□□□□ -1.33
SGIP1-204ENST00000371039 ANO8Q9HCE9 1232 aaPredicted RBP6.75□□□□□ -1.33
SGIP1-204ENST00000371039 P3H3Q8IVL6 736 aa6.74□□□□□ -1.33
SGIP1-204ENST00000371039 CUL7Q14999 1698 aa6.74□□□□□ -1.33
SGIP1-204ENST00000371039 DHX29Q7Z478 1369 aaKnown RBP6.73□□□□□ -1.33
SGIP1-204ENST00000371039 FAM50AQ14320 339 aaKnown RBP6.73□□□□□ -1.33
SGIP1-204ENST00000371039 RNF123Q5XPI4 1314 aa6.73□□□□□ -1.33
SGIP1-204ENST00000371039 MBD5Q9P267 1494 aa6.73□□□□□ -1.33
SGIP1-204ENST00000371039 DNMBPQ6XZF7 1577 aa6.72□□□□□ -1.33
SGIP1-204ENST00000371039 CNTLNQ9NXG0 1405 aa6.72□□□□□ -1.33
SGIP1-204ENST00000371039 NBPF8Q3BBV2 869 aa6.72□□□□□ -1.33
SGIP1-204ENST00000371039 CADPSQ9ULU8 1353 aa6.72□□□□□ -1.33
SGIP1-204ENST00000371039 SUPT6HQ7KZ85 1726 aaKnown RBP6.72□□□□□ -1.33
SGIP1-204ENST00000371039 TOPBP1Q92547 1522 aa6.72□□□□□ -1.33
SGIP1-204ENST00000371039 MYOM3Q5VTT5 1437 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms