RNA–Protein interactions for RNA: ENST00000370214.8

ABCD3-202, Transcript of ATP binding cassette subfamily D member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD3, Length 3,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-202ENST00000370214 FHOD3Q2V2M9 1422 aa10.41□□□□□ -0.74
ABCD3-202ENST00000370214 PHLDB1Q86UU1 1377 aa10.41□□□□□ -0.74
ABCD3-202ENST00000370214 FBLN2P98095 1184 aa10.4□□□□□ -0.74
ABCD3-202ENST00000370214 TDRD9Q8NDG6 1382 aaKnown RBP10.4□□□□□ -0.74
ABCD3-202ENST00000370214 ANP32CO43423 234 aa10.4□□□□□ -0.74
ABCD3-202ENST00000370214 IGF1RP08069 1367 aa10.4□□□□□ -0.75
ABCD3-202ENST00000370214 NEFLP07196 543 aa10.4□□□□□ -0.75
ABCD3-202ENST00000370214 HNRNPUQ00839 825 aaKnown RBP eCLIP10.39□□□□□ -0.75
ABCD3-202ENST00000370214 FAM9BQ8IZU0 186 aa10.38□□□□□ -0.75
ABCD3-202ENST00000370214 CUX1P39880 1505 aa10.38□□□□□ -0.75
ABCD3-202ENST00000370214 TSHZ2Q9NRE2 1034 aa10.38□□□□□ -0.75
ABCD3-202ENST00000370214 ZNF777Q9ULD5 760 aaPredicted RBP10.38□□□□□ -0.75
ABCD3-202ENST00000370214 ARHGAP35Q9NRY4 1499 aa10.38□□□□□ -0.75
ABCD3-202ENST00000370214 RAD54L2Q9Y4B4 1467 aa10.38□□□□□ -0.75
ABCD3-202ENST00000370214 PRXQ9BXM0 1461 aa10.35□□□□□ -0.75
ABCD3-202ENST00000370214 TONSLQ96HA7 1378 aa10.35□□□□□ -0.75
ABCD3-202ENST00000370214 SALL2Q9Y467 1007 aaPredicted RBP10.34□□□□□ -0.75
ABCD3-202ENST00000370214 MTUS2Q5JR59 1369 aa10.33□□□□□ -0.76
ABCD3-202ENST00000370214 SETD5Q9C0A6 1442 aa10.32□□□□□ -0.76
ABCD3-202ENST00000370214 BIVM-ERCC5R4GMW8 1640 aa10.32□□□□□ -0.76
ABCD3-202ENST00000370214 NESP48681 1621 aa10.32□□□□□ -0.76
ABCD3-202ENST00000370214 PRDM2Q13029 1718 aa10.31□□□□□ -0.76
ABCD3-202ENST00000370214 PPP1R15AO75807 674 aaPredicted RBP10.31□□□□□ -0.76
ABCD3-202ENST00000370214 CCDC184Q52MB2 194 aa10.31□□□□□ -0.76
ABCD3-202ENST00000370214 HMGXB3Q12766 1538 aa10.3□□□□□ -0.76
ABCD3-202ENST00000370214 TOP2BQ02880 1626 aa10.29□□□□□ -0.76
ABCD3-202ENST00000370214 FGD5Q6ZNL6 1462 aa10.28□□□□□ -0.76
ABCD3-202ENST00000370214 WDR97A6NE52 1622 aa10.28□□□□□ -0.76
ABCD3-202ENST00000370214 CADPSQ9ULU8 1353 aa10.27□□□□□ -0.76
ABCD3-202ENST00000370214 KDM2AQ9Y2K7 1162 aa10.26□□□□□ -0.77
ABCD3-202ENST00000370214 ZNF644Q9H582 1327 aaPredicted RBP10.26□□□□□ -0.77
ABCD3-202ENST00000370214 HSPA5P11021 654 aaKnown RBP10.25□□□□□ -0.77
ABCD3-202ENST00000370214 CLSPNQ9HAW4 1339 aa10.25□□□□□ -0.77
ABCD3-202ENST00000370214 RRBP1Q9P2E9 1410 aaKnown RBP10.25□□□□□ -0.77
ABCD3-202ENST00000370214 B4GALNT3Q6L9W6 998 aa10.23□□□□□ -0.77
ABCD3-202ENST00000370214 CFTRP13569 1480 aa10.22□□□□□ -0.77
ABCD3-202ENST00000370214 MRS2Q9HD23 443 aa10.22□□□□□ -0.77
ABCD3-202ENST00000370214 RBM19Q9Y4C8 960 aaKnown RBP10.22□□□□□ -0.77
ABCD3-202ENST00000370214 NCAPD3P42695 1498 aa10.22□□□□□ -0.77
ABCD3-202ENST00000370214 LRRC9Q6ZRR7 1453 aa10.22□□□□□ -0.77
ABCD3-202ENST00000370214 C11orf95C9JLR9 678 aaPredicted RBP10.21□□□□□ -0.77
ABCD3-202ENST00000370214 L3MBTL2Q969R5 705 aa10.21□□□□□ -0.77
ABCD3-202ENST00000370214 SENP3Q9H4L4 574 aaPredicted RBP10.2□□□□□ -0.78
ABCD3-202ENST00000370214 SLC4A1APQ9BWU0 796 aaKnown RBP10.2□□□□□ -0.78
ABCD3-202ENST00000370214 MAPKBP1O60336 1514 aa10.19□□□□□ -0.78
ABCD3-202ENST00000370214 FANCD2Q9BXW9 1451 aa10.19□□□□□ -0.78
ABCD3-202ENST00000370214 ERICH3Q5RHP9 1530 aa10.19□□□□□ -0.78
ABCD3-202ENST00000370214 ERICH6Q7L0X2 663 aa10.19□□□□□ -0.78
ABCD3-202ENST00000370214 PTPRKQ15262 1439 aa10.18□□□□□ -0.78
ABCD3-202ENST00000370214 EIF4G2P78344 907 aaKnown RBP eCLIP10.16□□□□□ -0.78
ABCD3-202ENST00000370214 MPHOSPH9Q99550 1183 aa10.16□□□□□ -0.78
ABCD3-202ENST00000370214 RGL3Q3MIN7 710 aa10.16□□□□□ -0.78
ABCD3-202ENST00000370214 WASHC2AQ641Q2 1341 aa10.16□□□□□ -0.78
ABCD3-202ENST00000370214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.15□□□□□ -0.782e-6■□□□□ 10.2
ABCD3-202ENST00000370214 AQRO60306 1485 aaKnown RBP eCLIP10.15□□□□□ -0.781e-8■■■■■ 43.7
ABCD3-202ENST00000370214 FHAD1B1AJZ9 1412 aa10.14□□□□□ -0.79
ABCD3-202ENST00000370214 ANP32EQ9BTT0 268 aa10.14□□□□□ -0.79
ABCD3-202ENST00000370214 PDS5BQ9NTI5 1447 aa10.14□□□□□ -0.79
ABCD3-202ENST00000370214 NBPF8Q3BBV2 869 aa10.14□□□□□ -0.79
ABCD3-202ENST00000370214 NBR1Q14596 966 aa10.13□□□□□ -0.79
ABCD3-202ENST00000370214 TIAM1Q13009 1591 aa10.13□□□□□ -0.79
ABCD3-202ENST00000370214 CDK11AQ9UQ88 783 aaPredicted RBP10.12□□□□□ -0.79
ABCD3-202ENST00000370214 CCDC18Q5T9S5 1454 aa10.11□□□□□ -0.79
ABCD3-202ENST00000370214 NPM2Q86SE8 214 aaKnown RBP10.11□□□□□ -0.79
ABCD3-202ENST00000370214 PCF11O94913 1555 aaKnown RBP10.11□□□□□ -0.79
ABCD3-202ENST00000370214 FGD6Q6ZV73 1430 aa10.11□□□□□ -0.79
ABCD3-202ENST00000370214 POLA1P09884 1462 aaPredicted RBP10.11□□□□□ -0.79
ABCD3-202ENST00000370214 AEBP2Q6ZN18 517 aaPredicted RBP10.09□□□□□ -0.79
ABCD3-202ENST00000370214 MSH5O43196 834 aa10.08□□□□□ -0.8
ABCD3-202ENST00000370214 CFDP1Q9UEE9 299 aaPredicted RBP10.08□□□□□ -0.8
ABCD3-202ENST00000370214 CHMP7Q8WUX9 453 aaPredicted RBP10.07□□□□□ -0.8
ABCD3-202ENST00000370214 MYT1LQ9UL68 1186 aa10.07□□□□□ -0.8
ABCD3-202ENST00000370214 CC2D2AQ9P2K1 1620 aa10.06□□□□□ -0.8
ABCD3-202ENST00000370214 CCER2I3L3R5 266 aa10.06□□□□□ -0.8
ABCD3-202ENST00000370214 PKD2Q13563 968 aa10.06□□□□□ -0.8
ABCD3-202ENST00000370214 SKAP1Q86WV1 359 aa10.06□□□□□ -0.8
ABCD3-202ENST00000370214 NCOA2Q15596 1464 aa10.06□□□□□ -0.8
ABCD3-202ENST00000370214 PRKRIP1Q9H875 184 aaPredicted RBP10.05□□□□□ -0.8
ABCD3-202ENST00000370214 TOPBP1Q92547 1522 aa10.05□□□□□ -0.8
ABCD3-202ENST00000370214 DCAF11Q8TEB1 546 aa10.04□□□□□ -0.8
ABCD3-202ENST00000370214 TMC1Q8TDI8 760 aa10.04□□□□□ -0.8
ABCD3-202ENST00000370214 NAIPQ13075 1403 aa10.04□□□□□ -0.8
ABCD3-202ENST00000370214 HNRNPMP52272 730 aaKnown RBP eCLIP10.03□□□□□ -0.81e-6■■■■■ 29.3
ABCD3-202ENST00000370214 FMN1Q68DA7 1419 aa10.03□□□□□ -0.8
ABCD3-202ENST00000370214 CDK13Q14004 1512 aaKnown RBP10.03□□□□□ -0.8
ABCD3-202ENST00000370214 MYT1Q01538 1121 aa10.03□□□□□ -0.8
ABCD3-202ENST00000370214 CASKIN1Q8WXD9 1431 aa10.02□□□□□ -0.81
ABCD3-202ENST00000370214 CC2D1BQ5T0F9 858 aaKnown RBP10.02□□□□□ -0.81
ABCD3-202ENST00000370214 GAPVD1Q14C86 1478 aa10.02□□□□□ -0.81
ABCD3-202ENST00000370214 KIF7Q2M1P5 1343 aa10.02□□□□□ -0.81
ABCD3-202ENST00000370214 CARD11Q9BXL7 1154 aa10.02□□□□□ -0.81
ABCD3-202ENST00000370214 MAP3K1Q13233 1512 aa10.01□□□□□ -0.81
ABCD3-202ENST00000370214 CCDC136Q96JN2 1154 aa10.01□□□□□ -0.81
ABCD3-202ENST00000370214 MYOM3Q5VTT5 1437 aa10□□□□□ -0.81
ABCD3-202ENST00000370214 UACAQ9BZF9 1416 aa9.99□□□□□ -0.81
ABCD3-202ENST00000370214 ST20-MTHFSA0A0A6YYL1 179 aa9.99□□□□□ -0.81
ABCD3-202ENST00000370214 PLIN1O60240 522 aa9.99□□□□□ -0.81
ABCD3-202ENST00000370214 TIMELESSQ9UNS1 1208 aa9.99□□□□□ -0.81
ABCD3-202ENST00000370214 URB2Q14146 1524 aaKnown RBP9.98□□□□□ -0.81
ABCD3-202ENST00000370214 AKNAQ7Z591 1439 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms