RNA–Protein interactions for RNA: ENST00000369968.6

CLCC1-204, Transcript of chloride channel CLIC like 1, humanhuman

TSL 5 BASIC

Gene CLCC1, Length 4,151 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-204ENST00000369968 WASHC2AQ641Q2 1341 aa8.99□□□□□ -0.97
CLCC1-204ENST00000369968 CEP164Q9UPV0 1460 aa8.99□□□□□ -0.97
CLCC1-204ENST00000369968 ERICH6BQ5W0A0 696 aa8.99□□□□□ -0.97
CLCC1-204ENST00000369968 POLR1AO95602 1720 aaPredicted RBP8.96□□□□□ -0.98
CLCC1-204ENST00000369968 PHF23Q9BUL5 403 aaPredicted RBP8.95□□□□□ -0.98
CLCC1-204ENST00000369968 WASHC2CQ9Y4E1 1318 aa8.93□□□□□ -0.98
CLCC1-204ENST00000369968 KANK4Q5T7N3 995 aaPredicted RBP8.93□□□□□ -0.98
CLCC1-204ENST00000369968 CCER2I3L3R5 266 aa8.93□□□□□ -0.98
CLCC1-204ENST00000369968 C11orf95C9JLR9 678 aaPredicted RBP8.91□□□□□ -0.98
CLCC1-204ENST00000369968 BIVM-ERCC5R4GMW8 1640 aa8.91□□□□□ -0.98
CLCC1-204ENST00000369968 MYT1LQ9UL68 1186 aa8.91□□□□□ -0.98
CLCC1-204ENST00000369968 TRIM52Q96A61 297 aa8.91□□□□□ -0.98
CLCC1-204ENST00000369968 ERICH3Q5RHP9 1530 aa8.9□□□□□ -0.98
CLCC1-204ENST00000369968 ABCA5Q8WWZ7 1642 aa8.89□□□□□ -0.99
CLCC1-204ENST00000369968 NCOA2Q15596 1464 aa8.89□□□□□ -0.99
CLCC1-204ENST00000369968 PRXQ9BXM0 1461 aa8.89□□□□□ -0.99
CLCC1-204ENST00000369968 RAB3GAP2Q9H2M9 1393 aa8.89□□□□□ -0.99
CLCC1-204ENST00000369968 CFAP43Q8NDM7 1665 aa8.88□□□□□ -0.99
CLCC1-204ENST00000369968 DENND4BO75064 1496 aaPredicted RBP8.88□□□□□ -0.99
CLCC1-204ENST00000369968 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.87□□□□□ -0.99
CLCC1-204ENST00000369968 TOP2BQ02880 1626 aa8.87□□□□□ -0.99
CLCC1-204ENST00000369968 RNF123Q5XPI4 1314 aa8.85□□□□□ -0.99
CLCC1-204ENST00000369968 DDX10Q13206 875 aaKnown RBP8.85□□□□□ -0.99
CLCC1-204ENST00000369968 NOP58Q9Y2X3 529 aaKnown RBP8.85□□□□□ -0.99
CLCC1-204ENST00000369968 IRX6P78412 446 aaPredicted RBP8.84□□□□□ -0.99
CLCC1-204ENST00000369968 CCDC184Q52MB2 194 aa8.84□□□□□ -0.99
CLCC1-204ENST00000369968 LRRIQ1Q96JM4 1722 aa8.84□□□□□ -0.99
CLCC1-204ENST00000369968 TIAM1Q13009 1591 aa8.84□□□□□ -0.99
CLCC1-204ENST00000369968 ARHGAP35Q9NRY4 1499 aa8.83□□□□□ -1
CLCC1-204ENST00000369968 MAP3K1Q13233 1512 aa8.83□□□□□ -1
CLCC1-204ENST00000369968 FBLN2P98095 1184 aa8.82□□□□□ -1
CLCC1-204ENST00000369968 CCNB3Q8WWL7 1395 aa8.82□□□□□ -1
CLCC1-204ENST00000369968 NBR1Q14596 966 aa8.8□□□□□ -1
CLCC1-204ENST00000369968 RTN4Q9NQC3 1192 aaKnown RBP8.79□□□□□ -1
CLCC1-204ENST00000369968 VIRMAQ69YN4 1812 aaKnown RBP8.79□□□□□ -1
CLCC1-204ENST00000369968 SIN3AQ96ST3 1273 aa8.78□□□□□ -1
CLCC1-204ENST00000369968 PPP4R2Q9NY27 417 aa8.78□□□□□ -1
CLCC1-204ENST00000369968 HIRIP3Q9BW71 556 aaPredicted RBP8.77□□□□□ -1.01
CLCC1-204ENST00000369968 IPO9Q96P70 1041 aaKnown RBP8.76□□□□□ -1.01
CLCC1-204ENST00000369968 B4GALNT3Q6L9W6 998 aa8.76□□□□□ -1.01
CLCC1-204ENST00000369968 AQRO60306 1485 aaKnown RBP eCLIP8.76□□□□□ -1.011e-10■■■■■ 41.1
CLCC1-204ENST00000369968 CDK11AQ9UQ88 783 aaPredicted RBP8.76□□□□□ -1.01
CLCC1-204ENST00000369968 PHLDB1Q86UU1 1377 aa8.76□□□□□ -1.01
CLCC1-204ENST00000369968 BRPF3Q9ULD4 1205 aa8.76□□□□□ -1.01
CLCC1-204ENST00000369968 SETD5Q9C0A6 1442 aa8.75□□□□□ -1.01
CLCC1-204ENST00000369968 AKNAQ7Z591 1439 aa8.75□□□□□ -1.01
CLCC1-204ENST00000369968 FHAD1B1AJZ9 1412 aa8.74□□□□□ -1.01
CLCC1-204ENST00000369968 BCORL1Q5H9F3 1711 aa8.73□□□□□ -1.01
CLCC1-204ENST00000369968 PTPN23Q9H3S7 1636 aa8.72□□□□□ -1.01
CLCC1-204ENST00000369968 LRRC9Q6ZRR7 1453 aa8.72□□□□□ -1.01
CLCC1-204ENST00000369968 KDM6BO15054 1643 aa8.72□□□□□ -1.01
CLCC1-204ENST00000369968 PTPRKQ15262 1439 aa8.72□□□□□ -1.01
CLCC1-204ENST00000369968 DCAF11Q8TEB1 546 aa8.71□□□□□ -1.01
CLCC1-204ENST00000369968 SMG6Q86US8 1419 aaKnown RBP8.71□□□□□ -1.02
CLCC1-204ENST00000369968 PKNOX2Q96KN3 472 aa8.71□□□□□ -1.02
CLCC1-204ENST00000369968 PCF11O94913 1555 aaKnown RBP8.7□□□□□ -1.02
CLCC1-204ENST00000369968 E9PCH4 1651 aa8.7□□□□□ -1.02
CLCC1-204ENST00000369968 HECW1Q76N89 1606 aa8.7□□□□□ -1.02
CLCC1-204ENST00000369968 NEFLP07196 543 aa8.69□□□□□ -1.02
CLCC1-204ENST00000369968 SPATA31E1Q6ZUB1 1445 aa8.69□□□□□ -1.02
CLCC1-204ENST00000369968 SENP3Q9H4L4 574 aaPredicted RBP8.69□□□□□ -1.02
CLCC1-204ENST00000369968 ZBED9Q6R2W3 1325 aa8.69□□□□□ -1.02
CLCC1-204ENST00000369968 GCC2Q8IWJ2 1684 aa8.68□□□□□ -1.02
CLCC1-204ENST00000369968 NCOA1Q15788 1441 aa8.68□□□□□ -1.02
CLCC1-204ENST00000369968 BICRAQ9NZM4 1560 aa8.68□□□□□ -1.02
CLCC1-204ENST00000369968 TIMELESSQ9UNS1 1208 aa8.68□□□□□ -1.02
CLCC1-204ENST00000369968 CNTLNQ9NXG0 1405 aa8.68□□□□□ -1.02
CLCC1-204ENST00000369968 CUX1P39880 1505 aa8.67□□□□□ -1.02
CLCC1-204ENST00000369968 HNRNPUQ00839 825 aaKnown RBP eCLIP8.66□□□□□ -1.02
CLCC1-204ENST00000369968 MYOM3Q5VTT5 1437 aa8.66□□□□□ -1.02
CLCC1-204ENST00000369968 PLEKHG5O94827 1062 aa8.65□□□□□ -1.02
CLCC1-204ENST00000369968 ERCC6Q03468 1493 aa8.65□□□□□ -1.02
CLCC1-204ENST00000369968 DHX29Q7Z478 1369 aaKnown RBP8.65□□□□□ -1.02
CLCC1-204ENST00000369968 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.64□□□□□ -1.03
CLCC1-204ENST00000369968 ANP32CO43423 234 aa8.64□□□□□ -1.03
CLCC1-204ENST00000369968 USP35Q9P2H5 1018 aa8.63□□□□□ -1.03
CLCC1-204ENST00000369968 P3H3Q8IVL6 736 aa8.62□□□□□ -1.03
CLCC1-204ENST00000369968 CHMP7Q8WUX9 453 aaPredicted RBP8.62□□□□□ -1.03
CLCC1-204ENST00000369968 RRAGDQ9NQL2 400 aaPredicted RBP8.61□□□□□ -1.03
CLCC1-204ENST00000369968 HFM1A2PYH4 1435 aa8.61□□□□□ -1.03
CLCC1-204ENST00000369968 TEX14Q8IWB6 1497 aa8.61□□□□□ -1.03
CLCC1-204ENST00000369968 ATAD2BQ9ULI0 1458 aa8.61□□□□□ -1.03
CLCC1-204ENST00000369968 PRDM2Q13029 1718 aa8.6□□□□□ -1.03
CLCC1-204ENST00000369968 ZMYND15Q9H091 742 aa8.6□□□□□ -1.03
CLCC1-204ENST00000369968 PRKRIP1Q9H875 184 aaPredicted RBP8.6□□□□□ -1.03
CLCC1-204ENST00000369968 ARHGEF11O15085 1522 aa8.6□□□□□ -1.03
CLCC1-204ENST00000369968 UACAQ9BZF9 1416 aa8.6□□□□□ -1.03
CLCC1-204ENST00000369968 BACH2Q9BYV9 841 aa8.6□□□□□ -1.03
CLCC1-204ENST00000369968 CCDC18Q5T9S5 1454 aa8.6□□□□□ -1.03
CLCC1-204ENST00000369968 FRAT1Q92837 279 aaPredicted RBP8.59□□□□□ -1.03
CLCC1-204ENST00000369968 NAIPQ13075 1403 aa8.59□□□□□ -1.03
CLCC1-204ENST00000369968 PDS5BQ9NTI5 1447 aa8.59□□□□□ -1.04
CLCC1-204ENST00000369968 NLRP1Q9C000 1473 aa8.58□□□□□ -1.04
CLCC1-204ENST00000369968 MBD5Q9P267 1494 aa8.58□□□□□ -1.04
CLCC1-204ENST00000369968 GSE1Q14687 1217 aa8.57□□□□□ -1.04
CLCC1-204ENST00000369968 FAM43AQ8N2R8 423 aa8.57□□□□□ -1.04
CLCC1-204ENST00000369968 KDM5CP41229 1560 aa8.56□□□□□ -1.04
CLCC1-204ENST00000369968 SNAPC4Q5SXM2 1469 aa8.56□□□□□ -1.04
CLCC1-204ENST00000369968 LRPPRCP42704 1394 aaKnown RBP8.56□□□□□ -1.04
CLCC1-204ENST00000369968 CCDC7Q96M83 1385 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms