RNA–Protein interactions for RNA: ENST00000369600.5

PHTF1-203, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-203ENST00000369600 MAPKBP1O60336 1514 aa20.26■□□□□ 0.83
PHTF1-203ENST00000369600 SETD5Q9C0A6 1442 aa20.26■□□□□ 0.83
PHTF1-203ENST00000369600 BIVM-ERCC5R4GMW8 1640 aa20.26■□□□□ 0.83
PHTF1-203ENST00000369600 ANP32CO43423 234 aa20.25■□□□□ 0.83
PHTF1-203ENST00000369600 PHLDB1Q86UU1 1377 aa20.22■□□□□ 0.83
PHTF1-203ENST00000369600 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
PHTF1-203ENST00000369600 CUX2O14529 1486 aa20.21■□□□□ 0.83
PHTF1-203ENST00000369600 IRX6P78412 446 aaPredicted RBP20.21■□□□□ 0.83
PHTF1-203ENST00000369600 RBM19Q9Y4C8 960 aaKnown RBP20.21■□□□□ 0.83
PHTF1-203ENST00000369600 PPP1R15AO75807 674 aaPredicted RBP20.18■□□□□ 0.82
PHTF1-203ENST00000369600 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
PHTF1-203ENST00000369600 IGF1RP08069 1367 aa20.12■□□□□ 0.81
PHTF1-203ENST00000369600 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
PHTF1-203ENST00000369600 CARMIL1Q5VZK9 1371 aa20.11■□□□□ 0.81
PHTF1-203ENST00000369600 LRRC9Q6ZRR7 1453 aa20.1■□□□□ 0.81
PHTF1-203ENST00000369600 BCL11AQ9H165 835 aa20.1■□□□□ 0.81
PHTF1-203ENST00000369600 HNRNPUQ00839 825 aaKnown RBP eCLIP20.1■□□□□ 0.81
PHTF1-203ENST00000369600 TONSLQ96HA7 1378 aa20.09■□□□□ 0.81
PHTF1-203ENST00000369600 CCER2I3L3R5 266 aa20.04■□□□□ 0.8
PHTF1-203ENST00000369600 FHOD3Q2V2M9 1422 aa20.03■□□□□ 0.8
PHTF1-203ENST00000369600 CFTRP13569 1480 aa20■□□□□ 0.79
PHTF1-203ENST00000369600 CNGB1Q14028 1251 aaPredicted RBP19.98■□□□□ 0.79
PHTF1-203ENST00000369600 ERICH6Q7L0X2 663 aa19.97■□□□□ 0.79
PHTF1-203ENST00000369600 FHAD1B1AJZ9 1412 aa19.97■□□□□ 0.79
PHTF1-203ENST00000369600 MSH5O43196 834 aa19.95■□□□□ 0.78
PHTF1-203ENST00000369600 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.78
PHTF1-203ENST00000369600 PCF11O94913 1555 aaKnown RBP19.94■□□□□ 0.78
PHTF1-203ENST00000369600 CHIC2Q9UKJ5 165 aa19.94■□□□□ 0.78
PHTF1-203ENST00000369600 FGD5Q6ZNL6 1462 aa19.93■□□□□ 0.78
PHTF1-203ENST00000369600 CDK11AQ9UQ88 783 aaPredicted RBP19.93■□□□□ 0.78
PHTF1-203ENST00000369600 RRP7BPQ9NSQ0 103 aa19.9■□□□□ 0.78
PHTF1-203ENST00000369600 MTUS2Q5JR59 1369 aa19.9■□□□□ 0.78
PHTF1-203ENST00000369600 CC2D2AQ9P2K1 1620 aa19.89■□□□□ 0.77
PHTF1-203ENST00000369600 FAM9BQ8IZU0 186 aa19.89■□□□□ 0.77
PHTF1-203ENST00000369600 MAP3K1Q13233 1512 aa19.87■□□□□ 0.77
PHTF1-203ENST00000369600 CCDC18Q5T9S5 1454 aa19.87■□□□□ 0.77
PHTF1-203ENST00000369600 ARID3CA6NKF2 412 aa19.86■□□□□ 0.77
PHTF1-203ENST00000369600 HSPA5P11021 654 aaKnown RBP19.84■□□□□ 0.77
PHTF1-203ENST00000369600 CCDC184Q52MB2 194 aa19.84■□□□□ 0.77
PHTF1-203ENST00000369600 CADPSQ9ULU8 1353 aa19.84■□□□□ 0.77
PHTF1-203ENST00000369600 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.77
PHTF1-203ENST00000369600 FGD6Q6ZV73 1430 aa19.82■□□□□ 0.76
PHTF1-203ENST00000369600 RAD54L2Q9Y4B4 1467 aa19.82■□□□□ 0.76
PHTF1-203ENST00000369600 PTPRKQ15262 1439 aa19.81■□□□□ 0.76
PHTF1-203ENST00000369600 FOXD1Q16676 465 aa19.81■□□□□ 0.76
PHTF1-203ENST00000369600 B4GALNT3Q6L9W6 998 aa19.8■□□□□ 0.76
PHTF1-203ENST00000369600 WASHC2AQ641Q2 1341 aa19.8■□□□□ 0.76
PHTF1-203ENST00000369600 CFAP43Q8NDM7 1665 aa19.78■□□□□ 0.76
PHTF1-203ENST00000369600 POLR3GLQ9BT43 218 aa19.77■□□□□ 0.76
PHTF1-203ENST00000369600 MRS2Q9HD23 443 aa19.75■□□□□ 0.75
PHTF1-203ENST00000369600 AQRO60306 1485 aaKnown RBP eCLIP19.75■□□□□ 0.753e-7■■■■■ 36.6
PHTF1-203ENST00000369600 UACAQ9BZF9 1416 aa19.75■□□□□ 0.75
PHTF1-203ENST00000369600 EIF4G2P78344 907 aaKnown RBP eCLIP19.74■□□□□ 0.75
PHTF1-203ENST00000369600 CASKIN1Q8WXD9 1431 aa19.74■□□□□ 0.75
PHTF1-203ENST00000369600 FYCO1Q9BQS8 1478 aa19.74■□□□□ 0.75
PHTF1-203ENST00000369600 HFM1A2PYH4 1435 aa19.7■□□□□ 0.74
PHTF1-203ENST00000369600 NAIPQ13075 1403 aa19.7■□□□□ 0.74
PHTF1-203ENST00000369600 PPP4R2Q9NY27 417 aa19.69■□□□□ 0.74
PHTF1-203ENST00000369600 C11orf95C9JLR9 678 aaPredicted RBP19.68■□□□□ 0.74
PHTF1-203ENST00000369600 FANCIQ9NVI1 1328 aa19.67■□□□□ 0.74
PHTF1-203ENST00000369600 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
PHTF1-203ENST00000369600 FMN1Q68DA7 1419 aa19.67■□□□□ 0.74
PHTF1-203ENST00000369600 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
PHTF1-203ENST00000369600 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
PHTF1-203ENST00000369600 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
PHTF1-203ENST00000369600 NCOA2Q15596 1464 aa19.65■□□□□ 0.74
PHTF1-203ENST00000369600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.65■□□□□ 0.74
PHTF1-203ENST00000369600 NBR1Q14596 966 aa19.64■□□□□ 0.73
PHTF1-203ENST00000369600 NESP48681 1621 aa19.64■□□□□ 0.73
PHTF1-203ENST00000369600 TDRD9Q8NDG6 1382 aaKnown RBP19.64■□□□□ 0.73
PHTF1-203ENST00000369600 ZNF326Q5BKZ1 582 aaKnown RBP19.63■□□□□ 0.73
PHTF1-203ENST00000369600 PRKRIP1Q9H875 184 aaPredicted RBP19.63■□□□□ 0.73
PHTF1-203ENST00000369600 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
PHTF1-203ENST00000369600 MYOM3Q5VTT5 1437 aa19.62■□□□□ 0.73
PHTF1-203ENST00000369600 MPHOSPH9Q99550 1183 aa19.6■□□□□ 0.73
PHTF1-203ENST00000369600 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
PHTF1-203ENST00000369600 EFCAB5A4FU69 1503 aa19.59■□□□□ 0.73
PHTF1-203ENST00000369600 CNTLNQ9NXG0 1405 aa19.57■□□□□ 0.72
PHTF1-203ENST00000369600 SNAPC4Q5SXM2 1469 aa19.56■□□□□ 0.72
PHTF1-203ENST00000369600 NBPF8Q3BBV2 869 aa19.55■□□□□ 0.72
PHTF1-203ENST00000369600 KDM5BQ9UGL1 1544 aa19.54■□□□□ 0.72
PHTF1-203ENST00000369600 CCDC7Q96M83 1385 aa19.53■□□□□ 0.72
PHTF1-203ENST00000369600 TOPBP1Q92547 1522 aa19.52■□□□□ 0.72
PHTF1-203ENST00000369600 DEKP35659 375 aaKnown RBP19.52■□□□□ 0.71
PHTF1-203ENST00000369600 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
PHTF1-203ENST00000369600 ZBED9Q6R2W3 1325 aa19.5■□□□□ 0.71
PHTF1-203ENST00000369600 SLC4A1APQ9BWU0 796 aaKnown RBP19.5■□□□□ 0.71
PHTF1-203ENST00000369600 CTTNBP2Q8WZ74 1663 aa19.49■□□□□ 0.71
PHTF1-203ENST00000369600 PAK3O75914 559 aaPredicted RBP19.49■□□□□ 0.71
PHTF1-203ENST00000369600 KIF7Q2M1P5 1343 aa19.49■□□□□ 0.71
PHTF1-203ENST00000369600 CCDC136Q96JN2 1154 aa19.49■□□□□ 0.71
PHTF1-203ENST00000369600 AKNAQ7Z591 1439 aa19.48■□□□□ 0.71
PHTF1-203ENST00000369600 ERICH6BQ5W0A0 696 aa19.48■□□□□ 0.71
PHTF1-203ENST00000369600 KDM6BO15054 1643 aa19.47■□□□□ 0.71
PHTF1-203ENST00000369600 NOP58Q9Y2X3 529 aaKnown RBP19.47■□□□□ 0.71
PHTF1-203ENST00000369600 SUPT6HQ7KZ85 1726 aaKnown RBP19.46■□□□□ 0.71
PHTF1-203ENST00000369600 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
PHTF1-203ENST00000369600 DENND4BO75064 1496 aaPredicted RBP19.45■□□□□ 0.7
PHTF1-203ENST00000369600 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
PHTF1-203ENST00000369600 SALL2Q9Y467 1007 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms