RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 TARBP1Q13395 1621 aaKnown RBP22.72■■□□□ 1.23
PHTF1-202ENST00000369598 APLP2Q06481 763 aa22.71■■□□□ 1.23
PHTF1-202ENST00000369598 ABCA5Q8WWZ7 1642 aa22.7■■□□□ 1.22
PHTF1-202ENST00000369598 CUL7Q14999 1698 aa22.69■■□□□ 1.22
PHTF1-202ENST00000369598 WDR62O43379 1518 aa22.68■■□□□ 1.22
PHTF1-202ENST00000369598 MIER1Q8N108 512 aa22.63■■□□□ 1.21
PHTF1-202ENST00000369598 ARAP1Q96P48 1450 aa22.63■■□□□ 1.21
PHTF1-202ENST00000369598 AQRO60306 1485 aaKnown RBP eCLIP22.63■■□□□ 1.213e-7■■■■■ 36.6
PHTF1-202ENST00000369598 IFT140Q96RY7 1462 aa22.62■■□□□ 1.21
PHTF1-202ENST00000369598 ARHGAP35Q9NRY4 1499 aa22.61■■□□□ 1.21
PHTF1-202ENST00000369598 THOC2Q8NI27 1593 aaKnown RBP22.54■■□□□ 1.2
PHTF1-202ENST00000369598 ZNF608Q9ULD9 1512 aaPredicted RBP22.54■■□□□ 1.2
PHTF1-202ENST00000369598 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
PHTF1-202ENST00000369598 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
PHTF1-202ENST00000369598 PBRM1Q86U86 1689 aa22.51■■□□□ 1.19
PHTF1-202ENST00000369598 ZNF316A6NFI3 1004 aaPredicted RBP22.49■■□□□ 1.19
PHTF1-202ENST00000369598 FHAD1B1AJZ9 1412 aa22.49■■□□□ 1.19
PHTF1-202ENST00000369598 CTTNBP2Q8WZ74 1663 aa22.47■■□□□ 1.19
PHTF1-202ENST00000369598 BCL11AQ9H165 835 aa22.46■■□□□ 1.19
PHTF1-202ENST00000369598 ADAMTS12P58397 1594 aa22.4■■□□□ 1.18
PHTF1-202ENST00000369598 KANK4Q5T7N3 995 aaPredicted RBP22.39■■□□□ 1.17
PHTF1-202ENST00000369598 EFCAB5A4FU69 1503 aa22.39■■□□□ 1.17
PHTF1-202ENST00000369598 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
PHTF1-202ENST00000369598 FHOD3Q2V2M9 1422 aa22.37■■□□□ 1.17
PHTF1-202ENST00000369598 ATP1B4Q9UN42 357 aaPredicted RBP22.37■■□□□ 1.17
PHTF1-202ENST00000369598 SNAPC4Q5SXM2 1469 aa22.36■■□□□ 1.17
PHTF1-202ENST00000369598 HNRNPUL2Q1KMD3 747 aaKnown RBP22.32■■□□□ 1.16
PHTF1-202ENST00000369598 CHMP7Q8WUX9 453 aaPredicted RBP22.31■■□□□ 1.16
PHTF1-202ENST00000369598 BCANQ96GW7 911 aa22.3■■□□□ 1.16
PHTF1-202ENST00000369598 FBLN2P98095 1184 aa22.29■■□□□ 1.16
PHTF1-202ENST00000369598 FMN1Q68DA7 1419 aa22.27■■□□□ 1.16
PHTF1-202ENST00000369598 MAGI1Q96QZ7 1491 aaPredicted RBP22.27■■□□□ 1.16
PHTF1-202ENST00000369598 IQGAP2Q13576 1575 aa22.25■■□□□ 1.15
PHTF1-202ENST00000369598 SAMD9Q5K651 1589 aa22.25■■□□□ 1.15
PHTF1-202ENST00000369598 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
PHTF1-202ENST00000369598 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
PHTF1-202ENST00000369598 PCF11O94913 1555 aaKnown RBP22.23■■□□□ 1.15
PHTF1-202ENST00000369598 CASKIN1Q8WXD9 1431 aa22.23■■□□□ 1.15
PHTF1-202ENST00000369598 TIAM1Q13009 1591 aa22.22■■□□□ 1.15
PHTF1-202ENST00000369598 SUPT16HQ9Y5B9 1047 aaKnown RBP22.22■■□□□ 1.15
PHTF1-202ENST00000369598 SYNJ2O15056 1496 aa22.21■■□□□ 1.15
PHTF1-202ENST00000369598 ANP32EQ9BTT0 268 aa22.21■■□□□ 1.15
PHTF1-202ENST00000369598 FYCO1Q9BQS8 1478 aa22.21■■□□□ 1.15
PHTF1-202ENST00000369598 KIAA0586Q9BVV6 1533 aa22.19■■□□□ 1.14
PHTF1-202ENST00000369598 TSHZ2Q9NRE2 1034 aa22.17■■□□□ 1.14
PHTF1-202ENST00000369598 LRRC9Q6ZRR7 1453 aa22.16■■□□□ 1.14
PHTF1-202ENST00000369598 UGGT2Q9NYU1 1516 aa22.12■■□□□ 1.13
PHTF1-202ENST00000369598 CFAP43Q8NDM7 1665 aa22.09■■□□□ 1.13
PHTF1-202ENST00000369598 RRBP1Q9P2E9 1410 aaKnown RBP22.08■■□□□ 1.12
PHTF1-202ENST00000369598 CEP170Q5SW79 1584 aa22.07■■□□□ 1.12
PHTF1-202ENST00000369598 CCNB3Q8WWL7 1395 aa22.06■■□□□ 1.12
PHTF1-202ENST00000369598 JPH4Q96JJ6 628 aa22.04■■□□□ 1.12
PHTF1-202ENST00000369598 NUP160Q12769 1436 aa22.04■■□□□ 1.12
PHTF1-202ENST00000369598 DISP1Q96F81 1524 aa22.02■■□□□ 1.12
PHTF1-202ENST00000369598 MTUS2Q5JR59 1369 aa22.02■■□□□ 1.12
PHTF1-202ENST00000369598 PHLDB1Q86UU1 1377 aa22■■□□□ 1.11
PHTF1-202ENST00000369598 KIAA0556O60303 1618 aa22■■□□□ 1.11
PHTF1-202ENST00000369598 ITGAEP38570 1179 aa21.99■■□□□ 1.11
PHTF1-202ENST00000369598 LRRIQ1Q96JM4 1722 aa21.96■■□□□ 1.11
PHTF1-202ENST00000369598 CARMIL2Q6F5E8 1435 aa21.96■■□□□ 1.11
PHTF1-202ENST00000369598 CCDC18Q5T9S5 1454 aa21.95■■□□□ 1.1
PHTF1-202ENST00000369598 HECW1Q76N89 1606 aa21.95■■□□□ 1.1
PHTF1-202ENST00000369598 ARID3CA6NKF2 412 aa21.95■■□□□ 1.1
PHTF1-202ENST00000369598 FAM50AQ14320 339 aaKnown RBP21.95■■□□□ 1.1
PHTF1-202ENST00000369598 KCNH8Q96L42 1107 aa21.93■■□□□ 1.1
PHTF1-202ENST00000369598 EPRSP07814 1512 aaKnown RBP21.91■■□□□ 1.1
PHTF1-202ENST00000369598 CHD1O14646 1710 aa21.87■■□□□ 1.09
PHTF1-202ENST00000369598 EHBP1L1Q8N3D4 1523 aa21.86■■□□□ 1.09
PHTF1-202ENST00000369598 CDK13Q14004 1512 aaKnown RBP21.85■■□□□ 1.09
PHTF1-202ENST00000369598 NCOA2Q15596 1464 aa21.85■■□□□ 1.09
PHTF1-202ENST00000369598 RAPGEF6Q8TEU7 1601 aa21.83■■□□□ 1.09
PHTF1-202ENST00000369598 SUPT6HQ7KZ85 1726 aaKnown RBP21.83■■□□□ 1.09
PHTF1-202ENST00000369598 FKBP8Q14318 412 aa21.82■■□□□ 1.08
PHTF1-202ENST00000369598 CDK11AQ9UQ88 783 aaPredicted RBP21.82■■□□□ 1.08
PHTF1-202ENST00000369598 MAGI3Q5TCQ9 1506 aa21.82■■□□□ 1.08
PHTF1-202ENST00000369598 PRG4Q92954 1404 aaPredicted RBP21.82■■□□□ 1.08
PHTF1-202ENST00000369598 NUP153P49790 1475 aaKnown RBP21.81■■□□□ 1.08
PHTF1-202ENST00000369598 FGD6Q6ZV73 1430 aa21.81■■□□□ 1.08
PHTF1-202ENST00000369598 PLB1Q6P1J6 1458 aa21.8■■□□□ 1.08
PHTF1-202ENST00000369598 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.79■■□□□ 1.08
PHTF1-202ENST00000369598 MYOM3Q5VTT5 1437 aa21.78■■□□□ 1.08
PHTF1-202ENST00000369598 PTPRGP23470 1445 aa21.73■■□□□ 1.07
PHTF1-202ENST00000369598 ARHGEF11O15085 1522 aa21.72■■□□□ 1.07
PHTF1-202ENST00000369598 SETD5Q9C0A6 1442 aa21.7■■□□□ 1.06
PHTF1-202ENST00000369598 RAB3GAP2Q9H2M9 1393 aa21.69■■□□□ 1.06
PHTF1-202ENST00000369598 RBM19Q9Y4C8 960 aaKnown RBP21.68■■□□□ 1.06
PHTF1-202ENST00000369598 DHX57Q6P158 1386 aaKnown RBP21.68■■□□□ 1.06
PHTF1-202ENST00000369598 ABCA8O94911 1581 aa21.66■■□□□ 1.06
PHTF1-202ENST00000369598 PLEKHD1A6NEE1 506 aa21.65■■□□□ 1.06
PHTF1-202ENST00000369598 SHROOM2Q13796 1616 aa21.65■■□□□ 1.06
PHTF1-202ENST00000369598 PTPN23Q9H3S7 1636 aa21.64■■□□□ 1.06
PHTF1-202ENST00000369598 CLSPNQ9HAW4 1339 aa21.64■■□□□ 1.05
PHTF1-202ENST00000369598 TROQ12816 1431 aaPredicted RBP21.64■■□□□ 1.05
PHTF1-202ENST00000369598 MIA2Q96PC5 1412 aa21.62■■□□□ 1.05
PHTF1-202ENST00000369598 ATP10BO94823 1461 aa21.61■■□□□ 1.05
PHTF1-202ENST00000369598 TRIM52Q96A61 297 aa21.59■■□□□ 1.05
PHTF1-202ENST00000369598 PTPRKQ15262 1439 aa21.58■■□□□ 1.05
PHTF1-202ENST00000369598 CLASP1Q7Z460 1538 aa21.58■■□□□ 1.04
PHTF1-202ENST00000369598 TCOF1Q13428 1488 aaKnown RBP21.58■■□□□ 1.04
PHTF1-202ENST00000369598 PRKCSHP14314 528 aaPredicted RBP21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms