RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 PRXQ9BXM0 1461 aa14.17□□□□□ -0.14
HIPK1-206ENST00000369559 FANCIQ9NVI1 1328 aa14.17□□□□□ -0.14
HIPK1-206ENST00000369559 NESP48681 1621 aa14.17□□□□□ -0.14
HIPK1-206ENST00000369559 TOP2BQ02880 1626 aa14.17□□□□□ -0.14
HIPK1-206ENST00000369559 TRIM52Q96A61 297 aa14.16□□□□□ -0.14
HIPK1-206ENST00000369559 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
HIPK1-206ENST00000369559 ANP32CO43423 234 aa14.12□□□□□ -0.15
HIPK1-206ENST00000369559 ERICH6Q7L0X2 663 aa14.12□□□□□ -0.15
HIPK1-206ENST00000369559 CFTRP13569 1480 aa14.11□□□□□ -0.15
HIPK1-206ENST00000369559 BIVM-ERCC5R4GMW8 1640 aa14.1□□□□□ -0.15
HIPK1-206ENST00000369559 SETD5Q9C0A6 1442 aa14.1□□□□□ -0.15
HIPK1-206ENST00000369559 CDK11AQ9UQ88 783 aaPredicted RBP14.08□□□□□ -0.16
HIPK1-206ENST00000369559 TIMELESSQ9UNS1 1208 aa14.08□□□□□ -0.16
HIPK1-206ENST00000369559 SIN3AQ96ST3 1273 aa14.08□□□□□ -0.16
HIPK1-206ENST00000369559 MYT1LQ9UL68 1186 aa14.08□□□□□ -0.16
HIPK1-206ENST00000369559 ARHGAP35Q9NRY4 1499 aa14.06□□□□□ -0.16
HIPK1-206ENST00000369559 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
HIPK1-206ENST00000369559 HIRIP3Q9BW71 556 aaPredicted RBP14.03□□□□□ -0.16
HIPK1-206ENST00000369559 TIAM1Q13009 1591 aa14.01□□□□□ -0.17
HIPK1-206ENST00000369559 MAP3K1Q13233 1512 aa14.01□□□□□ -0.17
HIPK1-206ENST00000369559 PDS5BQ9NTI5 1447 aa14.01□□□□□ -0.17
HIPK1-206ENST00000369559 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
HIPK1-206ENST00000369559 KIF27Q86VH2 1401 aa13.98□□□□□ -0.17
HIPK1-206ENST00000369559 ERCC6Q03468 1493 aa13.98□□□□□ -0.17
HIPK1-206ENST00000369559 ERICH6BQ5W0A0 696 aa13.97□□□□□ -0.17
HIPK1-206ENST00000369559 IRX6P78412 446 aaPredicted RBP13.97□□□□□ -0.17
HIPK1-206ENST00000369559 DEKP35659 375 aaKnown RBP13.97□□□□□ -0.17
HIPK1-206ENST00000369559 HNRNPUQ00839 825 aaKnown RBP eCLIP13.96□□□□□ -0.17
HIPK1-206ENST00000369559 LRRC9Q6ZRR7 1453 aa13.95□□□□□ -0.18
HIPK1-206ENST00000369559 PHLDB1Q86UU1 1377 aa13.95□□□□□ -0.18
HIPK1-206ENST00000369559 PRKCSHP14314 528 aaPredicted RBP13.95□□□□□ -0.18
HIPK1-206ENST00000369559 FAM50AQ14320 339 aaKnown RBP13.93□□□□□ -0.18
HIPK1-206ENST00000369559 PPP4R2Q9NY27 417 aa13.93□□□□□ -0.18
HIPK1-206ENST00000369559 KIF21AQ7Z4S6 1674 aa13.92□□□□□ -0.18
HIPK1-206ENST00000369559 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
HIPK1-206ENST00000369559 CUX1P39880 1505 aa13.91□□□□□ -0.18
HIPK1-206ENST00000369559 TONSLQ96HA7 1378 aa13.9□□□□□ -0.18
HIPK1-206ENST00000369559 CFAP43Q8NDM7 1665 aa13.87□□□□□ -0.19
HIPK1-206ENST00000369559 NOP58Q9Y2X3 529 aaKnown RBP13.85□□□□□ -0.19
HIPK1-206ENST00000369559 FHAD1B1AJZ9 1412 aa13.84□□□□□ -0.19
HIPK1-206ENST00000369559 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.2
HIPK1-206ENST00000369559 MRC2Q9UBG0 1479 aa13.83□□□□□ -0.2
HIPK1-206ENST00000369559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.83□□□□□ -0.24e-14■□□□□ 8.5
HIPK1-206ENST00000369559 B4GALNT3Q6L9W6 998 aa13.81□□□□□ -0.2
HIPK1-206ENST00000369559 NBR1Q14596 966 aa13.8□□□□□ -0.2
HIPK1-206ENST00000369559 PCF11O94913 1555 aaKnown RBP13.8□□□□□ -0.2
HIPK1-206ENST00000369559 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
HIPK1-206ENST00000369559 CCDC18Q5T9S5 1454 aa13.79□□□□□ -0.2
HIPK1-206ENST00000369559 UACAQ9BZF9 1416 aa13.78□□□□□ -0.2
HIPK1-206ENST00000369559 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
HIPK1-206ENST00000369559 WASHC2AQ641Q2 1341 aa13.77□□□□□ -0.2
HIPK1-206ENST00000369559 IGF1RP08069 1367 aa13.77□□□□□ -0.2
HIPK1-206ENST00000369559 KDM5BQ9UGL1 1544 aa13.77□□□□□ -0.2
HIPK1-206ENST00000369559 DNMBPQ6XZF7 1577 aa13.77□□□□□ -0.21
HIPK1-206ENST00000369559 THOC2Q8NI27 1593 aaKnown RBP13.76□□□□□ -0.21
HIPK1-206ENST00000369559 ZBED9Q6R2W3 1325 aa13.75□□□□□ -0.21
HIPK1-206ENST00000369559 NCOA2Q15596 1464 aa13.75□□□□□ -0.21
HIPK1-206ENST00000369559 CCDC184Q52MB2 194 aa13.74□□□□□ -0.21
HIPK1-206ENST00000369559 HFM1A2PYH4 1435 aa13.74□□□□□ -0.21
HIPK1-206ENST00000369559 CNTLNQ9NXG0 1405 aa13.74□□□□□ -0.21
HIPK1-206ENST00000369559 FGD5Q6ZNL6 1462 aa13.74□□□□□ -0.21
HIPK1-206ENST00000369559 WDR62O43379 1518 aa13.73□□□□□ -0.21
HIPK1-206ENST00000369559 PTPN23Q9H3S7 1636 aa13.73□□□□□ -0.21
HIPK1-206ENST00000369559 HSPA5P11021 654 aaKnown RBP13.73□□□□□ -0.21
HIPK1-206ENST00000369559 CARMIL1Q5VZK9 1371 aa13.73□□□□□ -0.21
HIPK1-206ENST00000369559 FGD6Q6ZV73 1430 aa13.72□□□□□ -0.21
HIPK1-206ENST00000369559 FYCO1Q9BQS8 1478 aa13.72□□□□□ -0.21
HIPK1-206ENST00000369559 ANO8Q9HCE9 1232 aaPredicted RBP13.72□□□□□ -0.21
HIPK1-206ENST00000369559 ATP1B4Q9UN42 357 aaPredicted RBP13.71□□□□□ -0.21
HIPK1-206ENST00000369559 POLA1P09884 1462 aaPredicted RBP13.71□□□□□ -0.21
HIPK1-206ENST00000369559 RTL5Q5HYW3 569 aaPredicted RBP13.71□□□□□ -0.21
HIPK1-206ENST00000369559 FAM9BQ8IZU0 186 aa13.71□□□□□ -0.21
HIPK1-206ENST00000369559 ANP32AP39687 249 aaKnown RBP13.71□□□□□ -0.22
HIPK1-206ENST00000369559 IPO9Q96P70 1041 aaKnown RBP13.71□□□□□ -0.22
HIPK1-206ENST00000369559 RAD54L2Q9Y4B4 1467 aa13.7□□□□□ -0.22
HIPK1-206ENST00000369559 PRKRIP1Q9H875 184 aaPredicted RBP13.7□□□□□ -0.22
HIPK1-206ENST00000369559 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
HIPK1-206ENST00000369559 EIF4G2P78344 907 aaKnown RBP eCLIP13.68□□□□□ -0.22
HIPK1-206ENST00000369559 P3H3Q8IVL6 736 aa13.68□□□□□ -0.22
HIPK1-206ENST00000369559 PTPRKQ15262 1439 aa13.68□□□□□ -0.22
HIPK1-206ENST00000369559 CASKIN1Q8WXD9 1431 aa13.68□□□□□ -0.22
HIPK1-206ENST00000369559 NAIPQ13075 1403 aa13.67□□□□□ -0.22
HIPK1-206ENST00000369559 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.223e-7■■■■□ 26.6
HIPK1-206ENST00000369559 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
HIPK1-206ENST00000369559 FHOD3Q2V2M9 1422 aa13.66□□□□□ -0.22
HIPK1-206ENST00000369559 FMN1Q68DA7 1419 aa13.64□□□□□ -0.23
HIPK1-206ENST00000369559 NCOA1Q15788 1441 aa13.64□□□□□ -0.23
HIPK1-206ENST00000369559 EFCAB5A4FU69 1503 aa13.64□□□□□ -0.23
HIPK1-206ENST00000369559 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
HIPK1-206ENST00000369559 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
HIPK1-206ENST00000369559 CCDC7Q96M83 1385 aa13.64□□□□□ -0.23
HIPK1-206ENST00000369559 CCDC136Q96JN2 1154 aa13.63□□□□□ -0.23
HIPK1-206ENST00000369559 TDRD9Q8NDG6 1382 aaKnown RBP13.63□□□□□ -0.23
HIPK1-206ENST00000369559 AKNAQ7Z591 1439 aa13.62□□□□□ -0.23
HIPK1-206ENST00000369559 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
HIPK1-206ENST00000369559 C11orf95C9JLR9 678 aaPredicted RBP13.61□□□□□ -0.23
HIPK1-206ENST00000369559 RNF123Q5XPI4 1314 aa13.61□□□□□ -0.23
HIPK1-206ENST00000369559 IL27Q8NEV9 243 aa13.6□□□□□ -0.23
HIPK1-206ENST00000369559 HECW1Q76N89 1606 aa13.59□□□□□ -0.23
HIPK1-206ENST00000369559 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms