RNA–Protein interactions for RNA: ENST00000368196.7

NTRK1-202, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NTRK1, Length 2,701 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-202ENST00000368196 RBM19Q9Y4C8 960 aaKnown RBP24.01■■□□□ 1.43
NTRK1-202ENST00000368196 CFTRP13569 1480 aa24.01■■□□□ 1.43
NTRK1-202ENST00000368196 SIN3AQ96ST3 1273 aa24■■□□□ 1.43
NTRK1-202ENST00000368196 ERICH6Q7L0X2 663 aa23.98■■□□□ 1.43
NTRK1-202ENST00000368196 KIF27Q86VH2 1401 aa23.98■■□□□ 1.43
NTRK1-202ENST00000368196 WDR97A6NE52 1622 aa23.95■■□□□ 1.42
NTRK1-202ENST00000368196 HIRIP3Q9BW71 556 aaPredicted RBP23.94■■□□□ 1.42
NTRK1-202ENST00000368196 NESP48681 1621 aa23.94■■□□□ 1.42
NTRK1-202ENST00000368196 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
NTRK1-202ENST00000368196 LAMC3Q9Y6N6 1575 aa23.89■■□□□ 1.42
NTRK1-202ENST00000368196 SETD5Q9C0A6 1442 aa23.89■■□□□ 1.42
NTRK1-202ENST00000368196 PPP1R15AO75807 674 aaPredicted RBP23.89■■□□□ 1.42
NTRK1-202ENST00000368196 TRIM52Q96A61 297 aa23.86■■□□□ 1.41
NTRK1-202ENST00000368196 MSH5O43196 834 aa23.85■■□□□ 1.41
NTRK1-202ENST00000368196 PHLDB1Q86UU1 1377 aa23.84■■□□□ 1.41
NTRK1-202ENST00000368196 FAM50AQ14320 339 aaKnown RBP23.83■■□□□ 1.41
NTRK1-202ENST00000368196 TIAM1Q13009 1591 aa23.82■■□□□ 1.4
NTRK1-202ENST00000368196 LRRC9Q6ZRR7 1453 aa23.77■■□□□ 1.39
NTRK1-202ENST00000368196 PRDM2Q13029 1718 aa23.75■■□□□ 1.39
NTRK1-202ENST00000368196 NEFLP07196 543 aa23.75■■□□□ 1.39
NTRK1-202ENST00000368196 IGF1RP08069 1367 aa23.75■■□□□ 1.39
NTRK1-202ENST00000368196 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
NTRK1-202ENST00000368196 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
NTRK1-202ENST00000368196 P3H3Q8IVL6 736 aa23.71■■□□□ 1.39
NTRK1-202ENST00000368196 MAP3K1Q13233 1512 aa23.7■■□□□ 1.38
NTRK1-202ENST00000368196 ANP32CO43423 234 aa23.7■■□□□ 1.38
NTRK1-202ENST00000368196 CCER2I3L3R5 266 aa23.69■■□□□ 1.38
NTRK1-202ENST00000368196 ATP1B4Q9UN42 357 aaPredicted RBP23.68■■□□□ 1.38
NTRK1-202ENST00000368196 ERCC6Q03468 1493 aa23.68■■□□□ 1.38
NTRK1-202ENST00000368196 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
NTRK1-202ENST00000368196 KIF21AQ7Z4S6 1674 aa23.63■■□□□ 1.37
NTRK1-202ENST00000368196 TIMELESSQ9UNS1 1208 aa23.63■■□□□ 1.37
NTRK1-202ENST00000368196 FANCIQ9NVI1 1328 aa23.62■■□□□ 1.37
NTRK1-202ENST00000368196 MYT1LQ9UL68 1186 aa23.61■■□□□ 1.37
NTRK1-202ENST00000368196 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
NTRK1-202ENST00000368196 PCF11O94913 1555 aaKnown RBP23.57■■□□□ 1.36
NTRK1-202ENST00000368196 ANO8Q9HCE9 1232 aaPredicted RBP23.57■■□□□ 1.36
NTRK1-202ENST00000368196 DEKP35659 375 aaKnown RBP23.56■■□□□ 1.36
NTRK1-202ENST00000368196 IRX6P78412 446 aaPredicted RBP23.55■■□□□ 1.36
NTRK1-202ENST00000368196 RAD54L2Q9Y4B4 1467 aa23.54■■□□□ 1.36
NTRK1-202ENST00000368196 CFAP43Q8NDM7 1665 aa23.53■■□□□ 1.36
NTRK1-202ENST00000368196 FHAD1B1AJZ9 1412 aa23.52■■□□□ 1.36
NTRK1-202ENST00000368196 THOC2Q8NI27 1593 aaKnown RBP23.51■■□□□ 1.35
NTRK1-202ENST00000368196 FHOD3Q2V2M9 1422 aa23.5■■□□□ 1.35
NTRK1-202ENST00000368196 TONSLQ96HA7 1378 aa23.5■■□□□ 1.35
NTRK1-202ENST00000368196 HNRNPUQ00839 825 aaKnown RBP eCLIP23.47■■□□□ 1.35
NTRK1-202ENST00000368196 MRC2Q9UBG0 1479 aa23.46■■□□□ 1.35
NTRK1-202ENST00000368196 PTPRKQ15262 1439 aa23.42■■□□□ 1.34
NTRK1-202ENST00000368196 POLA1P09884 1462 aaPredicted RBP23.42■■□□□ 1.34
NTRK1-202ENST00000368196 TOPBP1Q92547 1522 aa23.41■■□□□ 1.34
NTRK1-202ENST00000368196 CCDC18Q5T9S5 1454 aa23.41■■□□□ 1.34
NTRK1-202ENST00000368196 DNMBPQ6XZF7 1577 aa23.4■■□□□ 1.34
NTRK1-202ENST00000368196 WDR62O43379 1518 aa23.4■■□□□ 1.34
NTRK1-202ENST00000368196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.39■■□□□ 1.33
NTRK1-202ENST00000368196 URB2Q14146 1524 aaKnown RBP23.39■■□□□ 1.33
NTRK1-202ENST00000368196 FGD6Q6ZV73 1430 aa23.38■■□□□ 1.33
NTRK1-202ENST00000368196 FYCO1Q9BQS8 1478 aa23.36■■□□□ 1.33
NTRK1-202ENST00000368196 CDK11AQ9UQ88 783 aaPredicted RBP23.36■■□□□ 1.33
NTRK1-202ENST00000368196 CASKIN1Q8WXD9 1431 aa23.35■■□□□ 1.33
NTRK1-202ENST00000368196 AQRO60306 1485 aaKnown RBP eCLIP23.34■■□□□ 1.339e-7■■■■■ 38.9
NTRK1-202ENST00000368196 UACAQ9BZF9 1416 aa23.34■■□□□ 1.33
NTRK1-202ENST00000368196 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
NTRK1-202ENST00000368196 KDM5BQ9UGL1 1544 aa23.33■■□□□ 1.33
NTRK1-202ENST00000368196 CCDC184Q52MB2 194 aa23.33■■□□□ 1.33
NTRK1-202ENST00000368196 WASHC2AQ641Q2 1341 aa23.32■■□□□ 1.32
NTRK1-202ENST00000368196 SALL2Q9Y467 1007 aaPredicted RBP23.32■■□□□ 1.32
NTRK1-202ENST00000368196 HFM1A2PYH4 1435 aa23.31■■□□□ 1.32
NTRK1-202ENST00000368196 PTPN23Q9H3S7 1636 aa23.3■■□□□ 1.32
NTRK1-202ENST00000368196 ERICH6BQ5W0A0 696 aa23.29■■□□□ 1.32
NTRK1-202ENST00000368196 HSPA5P11021 654 aaKnown RBP23.29■■□□□ 1.32
NTRK1-202ENST00000368196 TDRD9Q8NDG6 1382 aaKnown RBP23.29■■□□□ 1.32
NTRK1-202ENST00000368196 NAIPQ13075 1403 aa23.28■■□□□ 1.32
NTRK1-202ENST00000368196 MTUS2Q5JR59 1369 aa23.25■■□□□ 1.31
NTRK1-202ENST00000368196 EFCAB5A4FU69 1503 aa23.22■■□□□ 1.31
NTRK1-202ENST00000368196 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
NTRK1-202ENST00000368196 RRP7BPQ9NSQ0 103 aa23.19■■□□□ 1.3
NTRK1-202ENST00000368196 CUL7Q14999 1698 aa23.19■■□□□ 1.3
NTRK1-202ENST00000368196 PPP4R2Q9NY27 417 aa23.19■■□□□ 1.3
NTRK1-202ENST00000368196 C11orf95C9JLR9 678 aaPredicted RBP23.18■■□□□ 1.3
NTRK1-202ENST00000368196 B4GALNT3Q6L9W6 998 aa23.17■■□□□ 1.3
NTRK1-202ENST00000368196 CTTNBP2Q8WZ74 1663 aa23.17■■□□□ 1.3
NTRK1-202ENST00000368196 CHIC2Q9UKJ5 165 aa23.17■■□□□ 1.3
NTRK1-202ENST00000368196 FAM9BQ8IZU0 186 aa23.17■■□□□ 1.3
NTRK1-202ENST00000368196 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
NTRK1-202ENST00000368196 NCOA2Q15596 1464 aa23.16■■□□□ 1.3
NTRK1-202ENST00000368196 NBR1Q14596 966 aa23.16■■□□□ 1.3
NTRK1-202ENST00000368196 CCDC136Q96JN2 1154 aa23.15■■□□□ 1.3
NTRK1-202ENST00000368196 DENND4BO75064 1496 aaPredicted RBP23.15■■□□□ 1.3
NTRK1-202ENST00000368196 MYOM3Q5VTT5 1437 aa23.14■■□□□ 1.3
NTRK1-202ENST00000368196 LRRIQ1Q96JM4 1722 aa23.14■■□□□ 1.29
NTRK1-202ENST00000368196 EIF4G2P78344 907 aaKnown RBP eCLIP23.13■■□□□ 1.299e-7■■■■■ 32.5
NTRK1-202ENST00000368196 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
NTRK1-202ENST00000368196 CNTLNQ9NXG0 1405 aa23.11■■□□□ 1.29
NTRK1-202ENST00000368196 PRKRIP1Q9H875 184 aaPredicted RBP23.1■■□□□ 1.29
NTRK1-202ENST00000368196 NOP58Q9Y2X3 529 aaKnown RBP23.1■■□□□ 1.29
NTRK1-202ENST00000368196 FOXD1Q16676 465 aa23.1■■□□□ 1.29
NTRK1-202ENST00000368196 UBE2Q2Q8WVN8 375 aa23.08■■□□□ 1.29
NTRK1-202ENST00000368196 MRS2Q9HD23 443 aa23.08■■□□□ 1.28
NTRK1-202ENST00000368196 L3MBTL2Q969R5 705 aa23.07■■□□□ 1.28
NTRK1-202ENST00000368196 KDM6BO15054 1643 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms