RNA–Protein interactions for RNA: ENST00000367165.3

CLDN20-201, Transcript of claudin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN20, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20-201ENST00000367165 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
CLDN20-201ENST00000367165 FGD5Q6ZNL6 1462 aa17.01■□□□□ 0.31
CLDN20-201ENST00000367165 SNAPC4Q5SXM2 1469 aa17■□□□□ 0.31
CLDN20-201ENST00000367165 SLC4A2P04920 1241 aa17■□□□□ 0.31
CLDN20-201ENST00000367165 CUX1P39880 1505 aa16.97■□□□□ 0.31
CLDN20-201ENST00000367165 MAGI1Q96QZ7 1491 aaPredicted RBP16.97■□□□□ 0.31
CLDN20-201ENST00000367165 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.3
CLDN20-201ENST00000367165 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
CLDN20-201ENST00000367165 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
CLDN20-201ENST00000367165 CHMP7Q8WUX9 453 aaPredicted RBP16.91■□□□□ 0.3
CLDN20-201ENST00000367165 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
CLDN20-201ENST00000367165 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
CLDN20-201ENST00000367165 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
CLDN20-201ENST00000367165 GAPVD1Q14C86 1478 aa16.85■□□□□ 0.29
CLDN20-201ENST00000367165 ABCA10Q8WWZ4 1543 aa16.83■□□□□ 0.28
CLDN20-201ENST00000367165 PBRM1Q86U86 1689 aa16.82■□□□□ 0.28
CLDN20-201ENST00000367165 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
CLDN20-201ENST00000367165 WRNQ14191 1432 aaPredicted RBP eCLIP16.73■□□□□ 0.27
CLDN20-201ENST00000367165 GRIN2AQ12879 1464 aa16.73■□□□□ 0.27
CLDN20-201ENST00000367165 ABCB7O75027 752 aa16.72■□□□□ 0.27
CLDN20-201ENST00000367165 ADAMTS12P58397 1594 aa16.71■□□□□ 0.27
CLDN20-201ENST00000367165 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
CLDN20-201ENST00000367165 CHRDL2Q6WN34 429 aa16.69■□□□□ 0.26
CLDN20-201ENST00000367165 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
CLDN20-201ENST00000367165 NUP160Q12769 1436 aa16.68■□□□□ 0.26
CLDN20-201ENST00000367165 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
CLDN20-201ENST00000367165 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
CLDN20-201ENST00000367165 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
CLDN20-201ENST00000367165 CEP170Q5SW79 1584 aa16.65■□□□□ 0.26
CLDN20-201ENST00000367165 FHAD1B1AJZ9 1412 aa16.65■□□□□ 0.26
CLDN20-201ENST00000367165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
CLDN20-201ENST00000367165 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
CLDN20-201ENST00000367165 ERCC6L2Q5T890 1561 aa16.64■□□□□ 0.25
CLDN20-201ENST00000367165 SP7Q8TDD2 431 aaPredicted RBP16.63■□□□□ 0.25
CLDN20-201ENST00000367165 ERICH3Q5RHP9 1530 aa16.62■□□□□ 0.25
CLDN20-201ENST00000367165 APLP2Q06481 763 aa16.62■□□□□ 0.25
CLDN20-201ENST00000367165 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
CLDN20-201ENST00000367165 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
CLDN20-201ENST00000367165 MYCNP04198 464 aaPredicted RBP16.55■□□□□ 0.24
CLDN20-201ENST00000367165 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
CLDN20-201ENST00000367165 PRG4Q92954 1404 aaPredicted RBP16.5■□□□□ 0.23
CLDN20-201ENST00000367165 RUSC2Q8N2Y8 1516 aa16.48■□□□□ 0.23
CLDN20-201ENST00000367165 JPH4Q96JJ6 628 aa16.45■□□□□ 0.22
CLDN20-201ENST00000367165 KIF13AQ9H1H9 1805 aa16.38■□□□□ 0.21
CLDN20-201ENST00000367165 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
CLDN20-201ENST00000367165 ABCC10Q5T3U5 1492 aa16.36■□□□□ 0.21
CLDN20-201ENST00000367165 KIAA0586Q9BVV6 1533 aa16.36■□□□□ 0.21
CLDN20-201ENST00000367165 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
CLDN20-201ENST00000367165 ZBTB22O15209 634 aa16.35■□□□□ 0.21
CLDN20-201ENST00000367165 CUL7Q14999 1698 aa16.34■□□□□ 0.21
CLDN20-201ENST00000367165 NPM1P06748 294 aaKnown RBP eCLIP16.34■□□□□ 0.21
CLDN20-201ENST00000367165 ADCY10Q96PN6 1610 aa16.34■□□□□ 0.21
CLDN20-201ENST00000367165 IGF1RP08069 1367 aa16.33■□□□□ 0.2
CLDN20-201ENST00000367165 DIP2BQ9P265 1576 aa16.32■□□□□ 0.2
CLDN20-201ENST00000367165 FAM69CQ0P6D2 419 aa16.31■□□□□ 0.2
CLDN20-201ENST00000367165 CARMIL1Q5VZK9 1371 aa16.23■□□□□ 0.19
CLDN20-201ENST00000367165 PTPRGP23470 1445 aa16.22■□□□□ 0.19
CLDN20-201ENST00000367165 CARMIL2Q6F5E8 1435 aa16.21■□□□□ 0.19
CLDN20-201ENST00000367165 KDM6BO15054 1643 aa16.21■□□□□ 0.19
CLDN20-201ENST00000367165 TNIKQ9UKE5 1360 aa16.19■□□□□ 0.18
CLDN20-201ENST00000367165 ABCC2Q92887 1545 aa16.19■□□□□ 0.18
CLDN20-201ENST00000367165 IQGAP2Q13576 1575 aa16.18■□□□□ 0.18
CLDN20-201ENST00000367165 UHRF1BP1LA0JNW5 1464 aa16.14■□□□□ 0.17
CLDN20-201ENST00000367165 ASXL2Q76L83 1435 aa16.13■□□□□ 0.17
CLDN20-201ENST00000367165 PLB1Q6P1J6 1458 aa16.13■□□□□ 0.17
CLDN20-201ENST00000367165 TTBK1Q5TCY1 1321 aaPredicted RBP16.13■□□□□ 0.17
CLDN20-201ENST00000367165 UACAQ9BZF9 1416 aa16.11■□□□□ 0.17
CLDN20-201ENST00000367165 DISP1Q96F81 1524 aa16.1■□□□□ 0.17
CLDN20-201ENST00000367165 TSPOAP1O95153 1857 aa16.1■□□□□ 0.17
CLDN20-201ENST00000367165 GLI2P10070 1586 aa16.1■□□□□ 0.17
CLDN20-201ENST00000367165 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.16
CLDN20-201ENST00000367165 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
CLDN20-201ENST00000367165 RAPGEF2Q9Y4G8 1499 aa16.08■□□□□ 0.16
CLDN20-201ENST00000367165 UGGT2Q9NYU1 1516 aa16.08■□□□□ 0.16
CLDN20-201ENST00000367165 KDM4FA0A1W2PPD8 638 aa16.07■□□□□ 0.16
CLDN20-201ENST00000367165 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
CLDN20-201ENST00000367165 KDM5BQ9UGL1 1544 aa16.06■□□□□ 0.16
CLDN20-201ENST00000367165 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
CLDN20-201ENST00000367165 POLA2Q14181 598 aa16.05■□□□□ 0.16
CLDN20-201ENST00000367165 PPRC1Q5VV67 1664 aaKnown RBP16.04■□□□□ 0.16
CLDN20-201ENST00000367165 KIAA0556O60303 1618 aa16.04■□□□□ 0.16
CLDN20-201ENST00000367165 EPRSP07814 1512 aaKnown RBP16.03■□□□□ 0.16
CLDN20-201ENST00000367165 HAX1O00165 279 aa16.02■□□□□ 0.16
CLDN20-201ENST00000367165 TEX14Q8IWB6 1497 aa16.01■□□□□ 0.15
CLDN20-201ENST00000367165 ZCCHC11Q5TAX3 1644 aaKnown RBP16■□□□□ 0.15
CLDN20-201ENST00000367165 MAP3K4Q9Y6R4 1608 aa16■□□□□ 0.15
CLDN20-201ENST00000367165 WDR7Q9Y4E6 1490 aa15.97■□□□□ 0.15
CLDN20-201ENST00000367165 ADGRL1O94910 1474 aa15.96■□□□□ 0.14
CLDN20-201ENST00000367165 COL17A1Q9UMD9 1497 aaPredicted RBP15.96■□□□□ 0.14
CLDN20-201ENST00000367165 GOLGA3Q08378 1498 aa15.95■□□□□ 0.14
CLDN20-201ENST00000367165 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
CLDN20-201ENST00000367165 REM2Q8IYK8 340 aaPredicted RBP15.91■□□□□ 0.14
CLDN20-201ENST00000367165 ABCA8O94911 1581 aa15.9■□□□□ 0.14
CLDN20-201ENST00000367165 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
CLDN20-201ENST00000367165 PRXQ9BXM0 1461 aa15.89■□□□□ 0.13
CLDN20-201ENST00000367165 MAGI3Q5TCQ9 1506 aa15.88■□□□□ 0.13
CLDN20-201ENST00000367165 CD109Q6YHK3 1445 aa15.85■□□□□ 0.13
CLDN20-201ENST00000367165 FXR2P51116 673 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLDN20-201ENST00000367165 CFAP43Q8NDM7 1665 aa15.85■□□□□ 0.13
CLDN20-201ENST00000367165 EVX2Q03828 476 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms