RNA–Protein interactions for RNA: ENST00000366871.7

T-202, Transcript of Brachyury protein, humanhuman

TSL 1 (best) BASIC

Gene T, Length 2,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-202ENST00000366871 WDR97A6NE52 1622 aa30.34■■■□□ 2.45
T-202ENST00000366871 AQRO60306 1485 aaKnown RBP eCLIP30.34■■■□□ 2.45
T-202ENST00000366871 URB2Q14146 1524 aaKnown RBP30.32■■■□□ 2.44
T-202ENST00000366871 CFAP43Q8NDM7 1665 aa30.31■■■□□ 2.44
T-202ENST00000366871 ACIN1Q9UKV3 1341 aaKnown RBP30.3■■■□□ 2.44
T-202ENST00000366871 CENPBP07199 599 aaPredicted RBP30.29■■■□□ 2.44
T-202ENST00000366871 SCAF1Q9H7N4 1312 aaKnown RBP30.29■■■□□ 2.44
T-202ENST00000366871 FYCO1Q9BQS8 1478 aa30.28■■■□□ 2.44
T-202ENST00000366871 CTTNBP2Q8WZ74 1663 aa30.28■■■□□ 2.44
T-202ENST00000366871 CASKIN1Q8WXD9 1431 aa30.24■■■□□ 2.43
T-202ENST00000366871 ABCA5Q8WWZ7 1642 aa30.24■■■□□ 2.43
T-202ENST00000366871 PCF11O94913 1555 aaKnown RBP30.24■■■□□ 2.43
T-202ENST00000366871 FMN1Q68DA7 1419 aa30.19■■■□□ 2.42
T-202ENST00000366871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.17■■■□□ 2.42
T-202ENST00000366871 GAPVD1Q14C86 1478 aa30.15■■■□□ 2.42
T-202ENST00000366871 FHOD3Q2V2M9 1422 aa30.15■■■□□ 2.42
T-202ENST00000366871 PHLDB1Q86UU1 1377 aa30.14■■■□□ 2.42
T-202ENST00000366871 NEUROD1Q13562 356 aa30.11■■■□□ 2.41
T-202ENST00000366871 SETD5Q9C0A6 1442 aa30.09■■■□□ 2.41
T-202ENST00000366871 RAB3GAP2Q9H2M9 1393 aa30.08■■■□□ 2.41
T-202ENST00000366871 SAMD9Q5K651 1589 aa30.08■■■□□ 2.41
T-202ENST00000366871 P3H3Q8IVL6 736 aa30.06■■■□□ 2.4
T-202ENST00000366871 TDRD9Q8NDG6 1382 aaKnown RBP30.05■■■□□ 2.4
T-202ENST00000366871 SNAPC4Q5SXM2 1469 aa30.03■■■□□ 2.4
T-202ENST00000366871 KIF21AQ7Z4S6 1674 aa30.02■■■□□ 2.4
T-202ENST00000366871 TARBP1Q13395 1621 aaKnown RBP30.01■■■□□ 2.39
T-202ENST00000366871 THOC2Q8NI27 1593 aaKnown RBP29.99■■■□□ 2.39
T-202ENST00000366871 ITGAEP38570 1179 aa29.98■■■□□ 2.39
T-202ENST00000366871 MIER1Q8N108 512 aa29.97■■■□□ 2.39
T-202ENST00000366871 MAPKBP1O60336 1514 aa29.94■■■□□ 2.38
T-202ENST00000366871 ATP1B4Q9UN42 357 aaPredicted RBP29.92■■■□□ 2.38
T-202ENST00000366871 FAM50AQ14320 339 aaKnown RBP29.91■■■□□ 2.38
T-202ENST00000366871 GRIN2BQ13224 1484 aa29.89■■■□□ 2.38
T-202ENST00000366871 TIMELESSQ9UNS1 1208 aa29.88■■■□□ 2.37
T-202ENST00000366871 FGD6Q6ZV73 1430 aa29.87■■■□□ 2.37
T-202ENST00000366871 DNAJC5BQ9UF47 199 aa29.85■■■□□ 2.37
T-202ENST00000366871 MTUS2Q5JR59 1369 aa29.84■■■□□ 2.37
T-202ENST00000366871 MRC2Q9UBG0 1479 aa29.84■■■□□ 2.37
T-202ENST00000366871 PELP1Q8IZL8 1130 aaKnown RBP29.82■■■□□ 2.36
T-202ENST00000366871 PBRM1Q86U86 1689 aa29.81■■■□□ 2.36
T-202ENST00000366871 GTF3C3Q9Y5Q9 886 aa29.79■■■□□ 2.36
T-202ENST00000366871 EHBP1L1Q8N3D4 1523 aa29.78■■■□□ 2.36
T-202ENST00000366871 CCDC18Q5T9S5 1454 aa29.78■■■□□ 2.36
T-202ENST00000366871 ADAMTS12P58397 1594 aa29.75■■■□□ 2.35
T-202ENST00000366871 SUPT6HQ7KZ85 1726 aaKnown RBP29.74■■■□□ 2.35
T-202ENST00000366871 LRRIQ1Q96JM4 1722 aa29.74■■■□□ 2.35
T-202ENST00000366871 MYOM3Q5VTT5 1437 aa29.73■■■□□ 2.35
T-202ENST00000366871 NCOA2Q15596 1464 aa29.73■■■□□ 2.35
T-202ENST00000366871 IQGAP2Q13576 1575 aa29.72■■■□□ 2.35
T-202ENST00000366871 ARHGEF11O15085 1522 aa29.7■■■□□ 2.34
T-202ENST00000366871 HFM1A2PYH4 1435 aa29.7■■■□□ 2.34
T-202ENST00000366871 IFT140Q96RY7 1462 aa29.69■■■□□ 2.34
T-202ENST00000366871 HECW1Q76N89 1606 aa29.67■■■□□ 2.34
T-202ENST00000366871 UGGT2Q9NYU1 1516 aa29.66■■■□□ 2.34
T-202ENST00000366871 WDR62O43379 1518 aa29.63■■■□□ 2.33
T-202ENST00000366871 YTHDC1Q96MU7 727 aaKnown RBP29.62■■■□□ 2.33
T-202ENST00000366871 UACAQ9BZF9 1416 aa29.6■■■□□ 2.33
T-202ENST00000366871 TCOF1Q13428 1488 aaKnown RBP29.58■■■□□ 2.33
T-202ENST00000366871 PTPN23Q9H3S7 1636 aa29.57■■■□□ 2.32
T-202ENST00000366871 PTPRKQ15262 1439 aa29.56■■■□□ 2.32
T-202ENST00000366871 EPRSP07814 1512 aaKnown RBP29.55■■■□□ 2.32
T-202ENST00000366871 NAIPQ13075 1403 aa29.53■■■□□ 2.32
T-202ENST00000366871 SIN3AQ96ST3 1273 aa29.53■■■□□ 2.32
T-202ENST00000366871 MAGI3Q5TCQ9 1506 aa29.52■■■□□ 2.32
T-202ENST00000366871 MIA2Q96PC5 1412 aa29.52■■■□□ 2.32
T-202ENST00000366871 KIAA0586Q9BVV6 1533 aa29.51■■■□□ 2.32
T-202ENST00000366871 AKNAQ7Z591 1439 aa29.51■■■□□ 2.31
T-202ENST00000366871 PPP1R15AO75807 674 aaPredicted RBP29.49■■■□□ 2.31
T-202ENST00000366871 ZNF608Q9ULD9 1512 aaPredicted RBP29.44■■■□□ 2.3
T-202ENST00000366871 KIAA0556O60303 1618 aa29.39■■■□□ 2.29
T-202ENST00000366871 GCC2Q8IWJ2 1684 aa29.38■■■□□ 2.29
T-202ENST00000366871 GRIN2AQ12879 1464 aa29.38■■■□□ 2.29
T-202ENST00000366871 TONSLQ96HA7 1378 aa29.37■■■□□ 2.29
T-202ENST00000366871 DISP1Q96F81 1524 aa29.36■■■□□ 2.29
T-202ENST00000366871 MAGI1Q96QZ7 1491 aaPredicted RBP29.35■■■□□ 2.29
T-202ENST00000366871 EIF4G3O43432 1585 aaKnown RBP29.34■■■□□ 2.29
T-202ENST00000366871 CDK13Q14004 1512 aaKnown RBP29.33■■■□□ 2.29
T-202ENST00000366871 CDK11AQ9UQ88 783 aaPredicted RBP29.26■■■□□ 2.27
T-202ENST00000366871 RAPGEF6Q8TEU7 1601 aa29.26■■■□□ 2.27
T-202ENST00000366871 ROCK1Q13464 1354 aa29.26■■■□□ 2.27
T-202ENST00000366871 NUP153P49790 1475 aaKnown RBP29.25■■■□□ 2.27
T-202ENST00000366871 SYNJ2O15056 1496 aa29.23■■■□□ 2.27
T-202ENST00000366871 ERCC6Q03468 1493 aa29.23■■■□□ 2.27
T-202ENST00000366871 RRP7BPQ9NSQ0 103 aa29.18■■■□□ 2.26
T-202ENST00000366871 DDX10Q13206 875 aaKnown RBP29.17■■■□□ 2.26
T-202ENST00000366871 DNMT1P26358 1616 aaKnown RBP29.15■■■□□ 2.26
T-202ENST00000366871 KDM5BQ9UGL1 1544 aa29.15■■■□□ 2.26
T-202ENST00000366871 DAPK1P53355 1430 aa29.14■■■□□ 2.26
T-202ENST00000366871 CHMP7Q8WUX9 453 aaPredicted RBP29.12■■■□□ 2.25
T-202ENST00000366871 CHIC2Q9UKJ5 165 aa29.12■■■□□ 2.25
T-202ENST00000366871 DENND4BO75064 1496 aaPredicted RBP29.12■■■□□ 2.25
T-202ENST00000366871 CCER2I3L3R5 266 aa29.11■■■□□ 2.25
T-202ENST00000366871 NUP160Q12769 1436 aa29.11■■■□□ 2.25
T-202ENST00000366871 CEP170Q5SW79 1584 aa29.11■■■□□ 2.25
T-202ENST00000366871 TROQ12816 1431 aaPredicted RBP29.11■■■□□ 2.25
T-202ENST00000366871 CARMIL2Q6F5E8 1435 aa29.1■■■□□ 2.25
T-202ENST00000366871 ABCC5O15440 1437 aa29.09■■■□□ 2.25
T-202ENST00000366871 MPHOSPH9Q99550 1183 aa29.08■■■□□ 2.25
T-202ENST00000366871 KDM6BO15054 1643 aa29.06■■■□□ 2.24
T-202ENST00000366871 TRIM52Q96A61 297 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms