RNA–Protein interactions for RNA: ENST00000366782.5

PSEN2-201, Transcript of presenilin 2, humanhuman

TSL 1 (best) BASIC

Gene PSEN2, Length 2,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-201ENST00000366782 LRRC9Q6ZRR7 1453 aa21.17■□□□□ 0.98
PSEN2-201ENST00000366782 P3H3Q8IVL6 736 aa21.17■□□□□ 0.98
PSEN2-201ENST00000366782 PHLDB1Q86UU1 1377 aa21.15■□□□□ 0.98
PSEN2-201ENST00000366782 NESP48681 1621 aa21.14■□□□□ 0.98
PSEN2-201ENST00000366782 RAB3GAP2Q9H2M9 1393 aa21.14■□□□□ 0.98
PSEN2-201ENST00000366782 DNMBPQ6XZF7 1577 aa21.13■□□□□ 0.97
PSEN2-201ENST00000366782 POLA1P09884 1462 aaPredicted RBP21.12■□□□□ 0.97
PSEN2-201ENST00000366782 TOPBP1Q92547 1522 aa21.12■□□□□ 0.97
PSEN2-201ENST00000366782 PCF11O94913 1555 aaKnown RBP21.11■□□□□ 0.97
PSEN2-201ENST00000366782 ABCA10Q8WWZ4 1543 aa21.11■□□□□ 0.97
PSEN2-201ENST00000366782 MAPKBP1O60336 1514 aa21.1■□□□□ 0.97
PSEN2-201ENST00000366782 FHAD1B1AJZ9 1412 aa21.08■□□□□ 0.97
PSEN2-201ENST00000366782 CFAP43Q8NDM7 1665 aa21.08■□□□□ 0.96
PSEN2-201ENST00000366782 FHOD3Q2V2M9 1422 aa21.07■□□□□ 0.96
PSEN2-201ENST00000366782 SETD5Q9C0A6 1442 aa21.04■□□□□ 0.96
PSEN2-201ENST00000366782 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
PSEN2-201ENST00000366782 FAM50AQ14320 339 aaKnown RBP21.02■□□□□ 0.96
PSEN2-201ENST00000366782 CUL7Q14999 1698 aa20.98■□□□□ 0.95
PSEN2-201ENST00000366782 CTTNBP2Q8WZ74 1663 aa20.97■□□□□ 0.95
PSEN2-201ENST00000366782 URB2Q14146 1524 aaKnown RBP20.97■□□□□ 0.95
PSEN2-201ENST00000366782 EFCAB5A4FU69 1503 aa20.97■□□□□ 0.95
PSEN2-201ENST00000366782 FYCO1Q9BQS8 1478 aa20.96■□□□□ 0.95
PSEN2-201ENST00000366782 CASKIN1Q8WXD9 1431 aa20.96■□□□□ 0.95
PSEN2-201ENST00000366782 SIN3AQ96ST3 1273 aa20.95■□□□□ 0.94
PSEN2-201ENST00000366782 WDR97A6NE52 1622 aa20.94■□□□□ 0.94
PSEN2-201ENST00000366782 AQRO60306 1485 aaKnown RBP eCLIP20.92■□□□□ 0.94
PSEN2-201ENST00000366782 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
PSEN2-201ENST00000366782 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.93
PSEN2-201ENST00000366782 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
PSEN2-201ENST00000366782 ABCA5Q8WWZ7 1642 aa20.86■□□□□ 0.93
PSEN2-201ENST00000366782 FMN1Q68DA7 1419 aa20.84■□□□□ 0.93
PSEN2-201ENST00000366782 LRRIQ1Q96JM4 1722 aa20.84■□□□□ 0.93
PSEN2-201ENST00000366782 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.84■□□□□ 0.93
PSEN2-201ENST00000366782 SAMD9Q5K651 1589 aa20.82■□□□□ 0.92
PSEN2-201ENST00000366782 GAPVD1Q14C86 1478 aa20.82■□□□□ 0.92
PSEN2-201ENST00000366782 FGD6Q6ZV73 1430 aa20.82■□□□□ 0.92
PSEN2-201ENST00000366782 KCNH8Q96L42 1107 aa20.81■□□□□ 0.92
PSEN2-201ENST00000366782 PTPRKQ15262 1439 aa20.79■□□□□ 0.92
PSEN2-201ENST00000366782 MTUS2Q5JR59 1369 aa20.77■□□□□ 0.91
PSEN2-201ENST00000366782 KIF21AQ7Z4S6 1674 aa20.75■□□□□ 0.91
PSEN2-201ENST00000366782 GRIN2BQ13224 1484 aa20.75■□□□□ 0.91
PSEN2-201ENST00000366782 PDS5BQ9NTI5 1447 aa20.74■□□□□ 0.91
PSEN2-201ENST00000366782 PPP1R15AO75807 674 aaPredicted RBP20.72■□□□□ 0.91
PSEN2-201ENST00000366782 DDX10Q13206 875 aaKnown RBP20.72■□□□□ 0.91
PSEN2-201ENST00000366782 TIMELESSQ9UNS1 1208 aa20.71■□□□□ 0.91
PSEN2-201ENST00000366782 NCOA2Q15596 1464 aa20.71■□□□□ 0.91
PSEN2-201ENST00000366782 HIRIP3Q9BW71 556 aaPredicted RBP20.71■□□□□ 0.91
PSEN2-201ENST00000366782 TARBP1Q13395 1621 aaKnown RBP20.7■□□□□ 0.9
PSEN2-201ENST00000366782 CCDC18Q5T9S5 1454 aa20.7■□□□□ 0.9
PSEN2-201ENST00000366782 HFM1A2PYH4 1435 aa20.68■□□□□ 0.9
PSEN2-201ENST00000366782 SUPT16HQ9Y5B9 1047 aaKnown RBP20.68■□□□□ 0.9
PSEN2-201ENST00000366782 PTPN23Q9H3S7 1636 aa20.67■□□□□ 0.9
PSEN2-201ENST00000366782 MYOM3Q5VTT5 1437 aa20.67■□□□□ 0.9
PSEN2-201ENST00000366782 MAGI3Q5TCQ9 1506 aa20.67■□□□□ 0.9
PSEN2-201ENST00000366782 NAIPQ13075 1403 aa20.64■□□□□ 0.9
PSEN2-201ENST00000366782 SUPT6HQ7KZ85 1726 aaKnown RBP20.64■□□□□ 0.89
PSEN2-201ENST00000366782 THOC2Q8NI27 1593 aaKnown RBP20.64■□□□□ 0.89
PSEN2-201ENST00000366782 UACAQ9BZF9 1416 aa20.63■□□□□ 0.89
PSEN2-201ENST00000366782 EHBP1L1Q8N3D4 1523 aa20.62■□□□□ 0.89
PSEN2-201ENST00000366782 ARHGEF11O15085 1522 aa20.61■□□□□ 0.89
PSEN2-201ENST00000366782 UGGT2Q9NYU1 1516 aa20.61■□□□□ 0.89
PSEN2-201ENST00000366782 PBRM1Q86U86 1689 aa20.59■□□□□ 0.89
PSEN2-201ENST00000366782 TONSLQ96HA7 1378 aa20.57■□□□□ 0.88
PSEN2-201ENST00000366782 RRP7BPQ9NSQ0 103 aa20.53■□□□□ 0.88
PSEN2-201ENST00000366782 KDM5BQ9UGL1 1544 aa20.53■□□□□ 0.88
PSEN2-201ENST00000366782 IQGAP2Q13576 1575 aa20.53■□□□□ 0.88
PSEN2-201ENST00000366782 CHIC2Q9UKJ5 165 aa20.52■□□□□ 0.88
PSEN2-201ENST00000366782 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
PSEN2-201ENST00000366782 TCOF1Q13428 1488 aaKnown RBP20.51■□□□□ 0.87
PSEN2-201ENST00000366782 EPRSP07814 1512 aaKnown RBP20.51■□□□□ 0.87
PSEN2-201ENST00000366782 HECW1Q76N89 1606 aa20.5■□□□□ 0.87
PSEN2-201ENST00000366782 DENND4BO75064 1496 aaPredicted RBP20.5■□□□□ 0.87
PSEN2-201ENST00000366782 CDK13Q14004 1512 aaKnown RBP20.5■□□□□ 0.87
PSEN2-201ENST00000366782 ARID3CA6NKF2 412 aa20.49■□□□□ 0.87
PSEN2-201ENST00000366782 KDM6BO15054 1643 aa20.48■□□□□ 0.87
PSEN2-201ENST00000366782 WDR62O43379 1518 aa20.45■□□□□ 0.86
PSEN2-201ENST00000366782 GCC2Q8IWJ2 1684 aa20.45■□□□□ 0.86
PSEN2-201ENST00000366782 MRC2Q9UBG0 1479 aa20.44■□□□□ 0.86
PSEN2-201ENST00000366782 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
PSEN2-201ENST00000366782 CCER2I3L3R5 266 aa20.43■□□□□ 0.86
PSEN2-201ENST00000366782 ANP32CO43423 234 aa20.43■□□□□ 0.86
PSEN2-201ENST00000366782 TSHZ2Q9NRE2 1034 aa20.43■□□□□ 0.86
PSEN2-201ENST00000366782 TRIM52Q96A61 297 aa20.39■□□□□ 0.86
PSEN2-201ENST00000366782 MIA2Q96PC5 1412 aa20.39■□□□□ 0.85
PSEN2-201ENST00000366782 AKNAQ7Z591 1439 aa20.38■□□□□ 0.85
PSEN2-201ENST00000366782 DISP1Q96F81 1524 aa20.35■□□□□ 0.85
PSEN2-201ENST00000366782 MPHOSPH9Q99550 1183 aa20.35■□□□□ 0.85
PSEN2-201ENST00000366782 FOXD1Q16676 465 aa20.35■□□□□ 0.85
PSEN2-201ENST00000366782 BCANQ96GW7 911 aa20.33■□□□□ 0.84
PSEN2-201ENST00000366782 IFT140Q96RY7 1462 aa20.32■□□□□ 0.84
PSEN2-201ENST00000366782 KIAA0556O60303 1618 aa20.32■□□□□ 0.84
PSEN2-201ENST00000366782 FKBP8Q14318 412 aa20.32■□□□□ 0.84
PSEN2-201ENST00000366782 HSPA5P11021 654 aaKnown RBP20.32■□□□□ 0.84
PSEN2-201ENST00000366782 ZNF644Q9H582 1327 aaPredicted RBP20.31■□□□□ 0.84
PSEN2-201ENST00000366782 ANP32EQ9BTT0 268 aa20.31■□□□□ 0.84
PSEN2-201ENST00000366782 WASHC2AQ641Q2 1341 aa20.31■□□□□ 0.84
PSEN2-201ENST00000366782 KIAA0586Q9BVV6 1533 aa20.31■□□□□ 0.84
PSEN2-201ENST00000366782 NUP153P49790 1475 aaKnown RBP20.31■□□□□ 0.84
PSEN2-201ENST00000366782 DAPK1P53355 1430 aa20.29■□□□□ 0.84
PSEN2-201ENST00000366782 L3MBTL2Q969R5 705 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms