RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ANP32AP39687 249 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-204ENST00000366767 KANK4Q5T7N3 995 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-204ENST00000366767 PDS5BQ9NTI5 1447 aa7.34□□□□□ -1.23
CDC42BPA-204ENST00000366767 SYNJ1O43426 1573 aa7.34□□□□□ -1.23
CDC42BPA-204ENST00000366767 PRXQ9BXM0 1461 aa7.34□□□□□ -1.24
CDC42BPA-204ENST00000366767 EIF4G1Q04637 1599 aaKnown RBP7.34□□□□□ -1.24
CDC42BPA-204ENST00000366767 BICRAQ9NZM4 1560 aa7.34□□□□□ -1.24
CDC42BPA-204ENST00000366767 CFTRP13569 1480 aa7.33□□□□□ -1.24
CDC42BPA-204ENST00000366767 DHX57Q6P158 1386 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-204ENST00000366767 POLR3GLQ9BT43 218 aa7.33□□□□□ -1.24
CDC42BPA-204ENST00000366767 EIF4G2P78344 907 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDC42BPA-204ENST00000366767 CCER2I3L3R5 266 aa7.32□□□□□ -1.24
CDC42BPA-204ENST00000366767 RAB3GAP2Q9H2M9 1393 aa7.31□□□□□ -1.24
CDC42BPA-204ENST00000366767 IGF1RP08069 1367 aa7.31□□□□□ -1.24
CDC42BPA-204ENST00000366767 BCL11AQ9H165 835 aa7.31□□□□□ -1.24
CDC42BPA-204ENST00000366767 RRBP1Q9P2E9 1410 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-204ENST00000366767 FKBP8Q14318 412 aa7.3□□□□□ -1.24
CDC42BPA-204ENST00000366767 AEBP2Q6ZN18 517 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-204ENST00000366767 ANP32EQ9BTT0 268 aa7.29□□□□□ -1.24
CDC42BPA-204ENST00000366767 FANCD2Q9BXW9 1451 aa7.29□□□□□ -1.24
CDC42BPA-204ENST00000366767 FBLN2P98095 1184 aa7.28□□□□□ -1.24
CDC42BPA-204ENST00000366767 TSPY4P0CV99 314 aa7.28□□□□□ -1.24
CDC42BPA-204ENST00000366767 TSPY10P0CW01 314 aa7.28□□□□□ -1.24
CDC42BPA-204ENST00000366767 CHIC2Q9UKJ5 165 aa7.27□□□□□ -1.25
CDC42BPA-204ENST00000366767 HNRNPUQ00839 825 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDC42BPA-204ENST00000366767 FGD5Q6ZNL6 1462 aa7.26□□□□□ -1.25
CDC42BPA-204ENST00000366767 CHMP7Q8WUX9 453 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-204ENST00000366767 ZNF777Q9ULD5 760 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-204ENST00000366767 NBR1Q14596 966 aa7.26□□□□□ -1.25
CDC42BPA-204ENST00000366767 PPP1R15AO75807 674 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-204ENST00000366767 SIN3AQ96ST3 1273 aa7.25□□□□□ -1.25
CDC42BPA-204ENST00000366767 MAP3K1Q13233 1512 aa7.25□□□□□ -1.25
CDC42BPA-204ENST00000366767 ARAP1Q96P48 1450 aa7.25□□□□□ -1.25
CDC42BPA-204ENST00000366767 BIVM-ERCC5R4GMW8 1640 aa7.25□□□□□ -1.25
CDC42BPA-204ENST00000366767 SLC4A1APQ9BWU0 796 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-204ENST00000366767 CUX1P39880 1505 aa7.25□□□□□ -1.25
CDC42BPA-204ENST00000366767 RRP7BPQ9NSQ0 103 aa7.24□□□□□ -1.25
CDC42BPA-204ENST00000366767 PLEKHD1A6NEE1 506 aa7.24□□□□□ -1.25
CDC42BPA-204ENST00000366767 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.24□□□□□ -1.25
CDC42BPA-204ENST00000366767 LRRC9Q6ZRR7 1453 aa7.24□□□□□ -1.25
CDC42BPA-204ENST00000366767 EFCAB5A4FU69 1503 aa7.24□□□□□ -1.25
CDC42BPA-204ENST00000366767 NPM2Q86SE8 214 aaKnown RBP7.24□□□□□ -1.25
CDC42BPA-204ENST00000366767 CNGB1Q14028 1251 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-204ENST00000366767 UNC13AQ9UPW8 1703 aa7.23□□□□□ -1.25
CDC42BPA-204ENST00000366767 ZNF326Q5BKZ1 582 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-204ENST00000366767 ANP32BQ92688 251 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-204ENST00000366767 ERICH6BQ5W0A0 696 aa7.22□□□□□ -1.25
CDC42BPA-204ENST00000366767 CASKIN1Q8WXD9 1431 aa7.22□□□□□ -1.25
CDC42BPA-204ENST00000366767 FHOD3Q2V2M9 1422 aa7.22□□□□□ -1.25
CDC42BPA-204ENST00000366767 CFDP1Q9UEE9 299 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-204ENST00000366767 ARID3CA6NKF2 412 aa7.22□□□□□ -1.25
CDC42BPA-204ENST00000366767 SUPT16HQ9Y5B9 1047 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-204ENST00000366767 FYCO1Q9BQS8 1478 aa7.21□□□□□ -1.25
CDC42BPA-204ENST00000366767 MRS2Q9HD23 443 aa7.2□□□□□ -1.26
CDC42BPA-204ENST00000366767 TDRD9Q8NDG6 1382 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-204ENST00000366767 CCDC18Q5T9S5 1454 aa7.2□□□□□ -1.26
CDC42BPA-204ENST00000366767 CARMIL2Q6F5E8 1435 aa7.2□□□□□ -1.26
CDC42BPA-204ENST00000366767 TMC1Q8TDI8 760 aa7.2□□□□□ -1.26
CDC42BPA-204ENST00000366767 FAM9BQ8IZU0 186 aa7.19□□□□□ -1.26
CDC42BPA-204ENST00000366767 ZBTB47Q9UFB7 747 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-204ENST00000366767 TIAM1Q13009 1591 aa7.18□□□□□ -1.26
CDC42BPA-204ENST00000366767 AQRO60306 1485 aaKnown RBP eCLIP7.18□□□□□ -1.261e-6■■■■■ 27.7
CDC42BPA-204ENST00000366767 GAPVD1Q14C86 1478 aa7.18□□□□□ -1.26
CDC42BPA-204ENST00000366767 MPHOSPH9Q99550 1183 aa7.18□□□□□ -1.26
CDC42BPA-204ENST00000366767 FGD6Q6ZV73 1430 aa7.17□□□□□ -1.26
CDC42BPA-204ENST00000366767 DNMBPQ6XZF7 1577 aa7.17□□□□□ -1.26
CDC42BPA-204ENST00000366767 UACAQ9BZF9 1416 aa7.17□□□□□ -1.26
CDC42BPA-204ENST00000366767 HIRIP3Q9BW71 556 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-204ENST00000366767 PHLDB1Q86UU1 1377 aa7.16□□□□□ -1.26
CDC42BPA-204ENST00000366767 SLC24A1O60721 1099 aa7.16□□□□□ -1.26
CDC42BPA-204ENST00000366767 TNNT2P45379 298 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-204ENST00000366767 MYOM3Q5VTT5 1437 aa7.16□□□□□ -1.26
CDC42BPA-204ENST00000366767 RSPH4AQ5TD94 716 aa7.16□□□□□ -1.26
CDC42BPA-204ENST00000366767 ABCA10Q8WWZ4 1543 aa7.15□□□□□ -1.26
CDC42BPA-204ENST00000366767 HSPA5P11021 654 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-204ENST00000366767 PPP4R2Q9NY27 417 aa7.15□□□□□ -1.26
CDC42BPA-204ENST00000366767 RAD54L2Q9Y4B4 1467 aa7.14□□□□□ -1.27
CDC42BPA-204ENST00000366767 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.14□□□□□ -1.27
CDC42BPA-204ENST00000366767 ANKRD30AQ9BXX3 1397 aa7.14□□□□□ -1.27
CDC42BPA-204ENST00000366767 CDCA8Q53HL2 280 aa7.14□□□□□ -1.27
CDC42BPA-204ENST00000366767 TOPBP1Q92547 1522 aa7.14□□□□□ -1.27
CDC42BPA-204ENST00000366767 ERCC6Q03468 1493 aa7.14□□□□□ -1.27
CDC42BPA-204ENST00000366767 CUL7Q14999 1698 aa7.14□□□□□ -1.27
CDC42BPA-204ENST00000366767 CARD11Q9BXL7 1154 aa7.13□□□□□ -1.27
CDC42BPA-204ENST00000366767 CC2D2AQ9P2K1 1620 aa7.13□□□□□ -1.27
CDC42BPA-204ENST00000366767 EHBP1L1Q8N3D4 1523 aa7.13□□□□□ -1.27
CDC42BPA-204ENST00000366767 LAMC3Q9Y6N6 1575 aa7.12□□□□□ -1.27
CDC42BPA-204ENST00000366767 POLA1P09884 1462 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-204ENST00000366767 MIA2Q96PC5 1412 aa7.12□□□□□ -1.27
CDC42BPA-204ENST00000366767 CCDC136Q96JN2 1154 aa7.12□□□□□ -1.27
CDC42BPA-204ENST00000366767 RTN4Q9NQC3 1192 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-204ENST00000366767 ROCK2O75116 1388 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-204ENST00000366767 NCOA2Q15596 1464 aa7.12□□□□□ -1.27
CDC42BPA-204ENST00000366767 ARID4BQ4LE39 1312 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-204ENST00000366767 KDM2AQ9Y2K7 1162 aa7.1□□□□□ -1.27
CDC42BPA-204ENST00000366767 HFM1A2PYH4 1435 aa7.1□□□□□ -1.27
CDC42BPA-204ENST00000366767 GRIN2BQ13224 1484 aa7.1□□□□□ -1.27
CDC42BPA-204ENST00000366767 WDR43Q15061 677 aaKnown RBP eCLIP7.1□□□□□ -1.27
CDC42BPA-204ENST00000366767 L3MBTL2Q969R5 705 aa7.09□□□□□ -1.27
CDC42BPA-204ENST00000366767 ARXQ96QS3 562 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms