RNA–Protein interactions for RNA: ENST00000366759.8

SNAP47-202, Transcript of synaptosome associated protein 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNAP47, Length 2,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-202ENST00000366759 PHLDB1Q86UU1 1377 aa27.68■■■□□ 2.02
SNAP47-202ENST00000366759 RAD54L2Q9Y4B4 1467 aa27.68■■■□□ 2.02
SNAP47-202ENST00000366759 MAP3K1Q13233 1512 aa27.68■■■□□ 2.02
SNAP47-202ENST00000366759 FAM50AQ14320 339 aaKnown RBP27.65■■■□□ 2.02
SNAP47-202ENST00000366759 FHAD1B1AJZ9 1412 aa27.62■■■□□ 2.01
SNAP47-202ENST00000366759 FHOD3Q2V2M9 1422 aa27.6■■■□□ 2.01
SNAP47-202ENST00000366759 SETD5Q9C0A6 1442 aa27.59■■■□□ 2.01
SNAP47-202ENST00000366759 NESP48681 1621 aa27.59■■■□□ 2.01
SNAP47-202ENST00000366759 MAPKBP1O60336 1514 aa27.58■■■□□ 2.01
SNAP47-202ENST00000366759 PCF11O94913 1555 aaKnown RBP27.57■■■□□ 2
SNAP47-202ENST00000366759 POLA1P09884 1462 aaPredicted RBP27.57■■■□□ 2
SNAP47-202ENST00000366759 DNMBPQ6XZF7 1577 aa27.55■■■□□ 2
SNAP47-202ENST00000366759 TOPBP1Q92547 1522 aa27.55■■■□□ 2
SNAP47-202ENST00000366759 ABCA10Q8WWZ4 1543 aa27.54■■■□□ 2
SNAP47-202ENST00000366759 SIN3AQ96ST3 1273 aa27.5■■□□□ 1.99
SNAP47-202ENST00000366759 CFAP43Q8NDM7 1665 aa27.47■■□□□ 1.99
SNAP47-202ENST00000366759 FYCO1Q9BQS8 1478 aa27.42■■□□□ 1.98
SNAP47-202ENST00000366759 CASKIN1Q8WXD9 1431 aa27.41■■□□□ 1.98
SNAP47-202ENST00000366759 EFCAB5A4FU69 1503 aa27.39■■□□□ 1.97
SNAP47-202ENST00000366759 TDRD9Q8NDG6 1382 aaKnown RBP27.36■■□□□ 1.97
SNAP47-202ENST00000366759 CUL7Q14999 1698 aa27.35■■□□□ 1.97
SNAP47-202ENST00000366759 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
SNAP47-202ENST00000366759 KCNH8Q96L42 1107 aa27.34■■□□□ 1.97
SNAP47-202ENST00000366759 URB2Q14146 1524 aaKnown RBP27.33■■□□□ 1.97
SNAP47-202ENST00000366759 AQRO60306 1485 aaKnown RBP eCLIP27.33■■□□□ 1.973e-7■■■■■ 38.1
SNAP47-202ENST00000366759 FMN1Q68DA7 1419 aa27.3■■□□□ 1.96
SNAP47-202ENST00000366759 CTTNBP2Q8WZ74 1663 aa27.3■■□□□ 1.96
SNAP47-202ENST00000366759 DDX10Q13206 875 aaKnown RBP27.27■■□□□ 1.96
SNAP47-202ENST00000366759 MTUS2Q5JR59 1369 aa27.26■■□□□ 1.95
SNAP47-202ENST00000366759 FGD6Q6ZV73 1430 aa27.25■■□□□ 1.95
SNAP47-202ENST00000366759 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
SNAP47-202ENST00000366759 DNAJC5BQ9UF47 199 aa27.24■■□□□ 1.95
SNAP47-202ENST00000366759 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.24■■□□□ 1.957e-10■■■■■ 69.8
SNAP47-202ENST00000366759 HIRIP3Q9BW71 556 aaPredicted RBP27.24■■□□□ 1.95
SNAP47-202ENST00000366759 SUPT16HQ9Y5B9 1047 aaKnown RBP27.22■■□□□ 1.95
SNAP47-202ENST00000366759 LAMC3Q9Y6N6 1575 aa27.21■■□□□ 1.95
SNAP47-202ENST00000366759 GAPVD1Q14C86 1478 aa27.2■■□□□ 1.95
SNAP47-202ENST00000366759 PPP1R15AO75807 674 aaPredicted RBP27.19■■□□□ 1.94
SNAP47-202ENST00000366759 TIMELESSQ9UNS1 1208 aa27.19■■□□□ 1.94
SNAP47-202ENST00000366759 PTPRKQ15262 1439 aa27.18■■□□□ 1.94
SNAP47-202ENST00000366759 ABCA5Q8WWZ7 1642 aa27.16■■□□□ 1.94
SNAP47-202ENST00000366759 SAMD9Q5K651 1589 aa27.12■■□□□ 1.93
SNAP47-202ENST00000366759 PDS5BQ9NTI5 1447 aa27.11■■□□□ 1.93
SNAP47-202ENST00000366759 CCDC18Q5T9S5 1454 aa27.11■■□□□ 1.93
SNAP47-202ENST00000366759 NCOA2Q15596 1464 aa27.11■■□□□ 1.93
SNAP47-202ENST00000366759 GRIN2BQ13224 1484 aa27.09■■□□□ 1.93
SNAP47-202ENST00000366759 LRRIQ1Q96JM4 1722 aa27.09■■□□□ 1.93
SNAP47-202ENST00000366759 HFM1A2PYH4 1435 aa27.08■■□□□ 1.93
SNAP47-202ENST00000366759 MYOM3Q5VTT5 1437 aa27.06■■□□□ 1.92
SNAP47-202ENST00000366759 TONSLQ96HA7 1378 aa27.06■■□□□ 1.92
SNAP47-202ENST00000366759 UACAQ9BZF9 1416 aa27.03■■□□□ 1.92
SNAP47-202ENST00000366759 NAIPQ13075 1403 aa27.02■■□□□ 1.92
SNAP47-202ENST00000366759 PTPN23Q9H3S7 1636 aa27.02■■□□□ 1.92
SNAP47-202ENST00000366759 KIF21AQ7Z4S6 1674 aa26.97■■□□□ 1.91
SNAP47-202ENST00000366759 CHIC2Q9UKJ5 165 aa26.97■■□□□ 1.91
SNAP47-202ENST00000366759 RRP7BPQ9NSQ0 103 aa26.97■■□□□ 1.91
SNAP47-202ENST00000366759 MAGI3Q5TCQ9 1506 aa26.96■■□□□ 1.91
SNAP47-202ENST00000366759 SUPT6HQ7KZ85 1726 aaKnown RBP26.95■■□□□ 1.91
SNAP47-202ENST00000366759 EHBP1L1Q8N3D4 1523 aa26.95■■□□□ 1.91
SNAP47-202ENST00000366759 ARID3CA6NKF2 412 aa26.94■■□□□ 1.9
SNAP47-202ENST00000366759 TARBP1Q13395 1621 aaKnown RBP26.94■■□□□ 1.9
SNAP47-202ENST00000366759 THOC2Q8NI27 1593 aaKnown RBP26.94■■□□□ 1.9
SNAP47-202ENST00000366759 ANP32CO43423 234 aa26.92■■□□□ 1.9
SNAP47-202ENST00000366759 UGGT2Q9NYU1 1516 aa26.91■■□□□ 1.9
SNAP47-202ENST00000366759 ARHGEF11O15085 1522 aa26.87■■□□□ 1.89
SNAP47-202ENST00000366759 TRIM52Q96A61 297 aa26.85■■□□□ 1.89
SNAP47-202ENST00000366759 CCER2I3L3R5 266 aa26.84■■□□□ 1.89
SNAP47-202ENST00000366759 BCANQ96GW7 911 aa26.84■■□□□ 1.89
SNAP47-202ENST00000366759 EPRSP07814 1512 aaKnown RBP26.81■■□□□ 1.88
SNAP47-202ENST00000366759 CDK13Q14004 1512 aaKnown RBP26.8■■□□□ 1.88
SNAP47-202ENST00000366759 IQGAP2Q13576 1575 aa26.8■■□□□ 1.88
SNAP47-202ENST00000366759 FKBP8Q14318 412 aa26.79■■□□□ 1.88
SNAP47-202ENST00000366759 HECW1Q76N89 1606 aa26.79■■□□□ 1.88
SNAP47-202ENST00000366759 KDM5BQ9UGL1 1544 aa26.78■■□□□ 1.88
SNAP47-202ENST00000366759 TCOF1Q13428 1488 aaKnown RBP26.78■■□□□ 1.88
SNAP47-202ENST00000366759 PBRM1Q86U86 1689 aa26.78■■□□□ 1.88
SNAP47-202ENST00000366759 TSHZ2Q9NRE2 1034 aa26.75■■□□□ 1.87
SNAP47-202ENST00000366759 DENND4BO75064 1496 aaPredicted RBP26.75■■□□□ 1.87
SNAP47-202ENST00000366759 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
SNAP47-202ENST00000366759 KDM6BO15054 1643 aa26.73■■□□□ 1.87
SNAP47-202ENST00000366759 FOXD1Q16676 465 aa26.71■■□□□ 1.87
SNAP47-202ENST00000366759 MPHOSPH9Q99550 1183 aa26.7■■□□□ 1.87
SNAP47-202ENST00000366759 HSPA5P11021 654 aaKnown RBP26.69■■□□□ 1.86
SNAP47-202ENST00000366759 WDR62O43379 1518 aa26.68■■□□□ 1.86
SNAP47-202ENST00000366759 MRC2Q9UBG0 1479 aa26.67■■□□□ 1.86
SNAP47-202ENST00000366759 MIA2Q96PC5 1412 aa26.67■■□□□ 1.86
SNAP47-202ENST00000366759 ZNF608Q9ULD9 1512 aaPredicted RBP26.66■■□□□ 1.86
SNAP47-202ENST00000366759 GCC2Q8IWJ2 1684 aa26.66■■□□□ 1.86
SNAP47-202ENST00000366759 WASHC2AQ641Q2 1341 aa26.65■■□□□ 1.86
SNAP47-202ENST00000366759 AKNAQ7Z591 1439 aa26.63■■□□□ 1.85
SNAP47-202ENST00000366759 MYT1Q01538 1121 aa26.63■■□□□ 1.85
SNAP47-202ENST00000366759 ZNF644Q9H582 1327 aaPredicted RBP26.62■■□□□ 1.85
SNAP47-202ENST00000366759 L3MBTL2Q969R5 705 aa26.62■■□□□ 1.85
SNAP47-202ENST00000366759 NEFLP07196 543 aa26.61■■□□□ 1.85
SNAP47-202ENST00000366759 EIF4G2P78344 907 aaKnown RBP eCLIP26.58■■□□□ 1.852e-6■■■■■ 38.7
SNAP47-202ENST00000366759 DISP1Q96F81 1524 aa26.55■■□□□ 1.84
SNAP47-202ENST00000366759 DAPK1P53355 1430 aa26.55■■□□□ 1.84
SNAP47-202ENST00000366759 KIAA0586Q9BVV6 1533 aa26.53■■□□□ 1.84
SNAP47-202ENST00000366759 IFT140Q96RY7 1462 aa26.53■■□□□ 1.84
SNAP47-202ENST00000366759 HNRNPUQ00839 825 aaKnown RBP eCLIP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms