RNA–Protein interactions for RNA: ENST00000362443.1

RNU4-82P-201, Transcript of RNA, U4 small nuclear 82, pseudogene, humanhuman

BASIC

Gene RNU4-82P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-82P-201ENST00000362443 SMARCA4P51532 1647 aa5.62□□□□□ -1.51
RNU4-82P-201ENST00000362443 CEP164Q9UPV0 1460 aa5.59□□□□□ -1.51
RNU4-82P-201ENST00000362443 ZNF219Q9P2Y4 722 aaPredicted RBP5.58□□□□□ -1.52
RNU4-82P-201ENST00000362443 ZNF608Q9ULD9 1512 aaPredicted RBP5.58□□□□□ -1.52
RNU4-82P-201ENST00000362443 POTEJP0CG39 1038 aa5.57□□□□□ -1.52
RNU4-82P-201ENST00000362443 PRKAR2AP13861 404 aaKnown RBP5.57□□□□□ -1.52
RNU4-82P-201ENST00000362443 RSF1Q96T23 1441 aaPredicted RBP5.57□□□□□ -1.52
RNU4-82P-201ENST00000362443 PEG3Q9GZU2 1588 aa5.56□□□□□ -1.52
RNU4-82P-201ENST00000362443 KDM4FA0A1W2PPD8 638 aa5.56□□□□□ -1.52
RNU4-82P-201ENST00000362443 URB2Q14146 1524 aaKnown RBP5.56□□□□□ -1.52
RNU4-82P-201ENST00000362443 FANCD2Q9BXW9 1451 aa5.56□□□□□ -1.52
RNU4-82P-201ENST00000362443 CHD1O14646 1710 aa5.54□□□□□ -1.52
RNU4-82P-201ENST00000362443 FBXO41Q8TF61 875 aa5.5□□□□□ -1.53
RNU4-82P-201ENST00000362443 LMTK3Q96Q04 1460 aa5.5□□□□□ -1.53
RNU4-82P-201ENST00000362443 IFT140Q96RY7 1462 aa5.5□□□□□ -1.53
RNU4-82P-201ENST00000362443 EIF4G3O43432 1585 aaKnown RBP5.5□□□□□ -1.53
RNU4-82P-201ENST00000362443 FBLN2P98095 1184 aa5.49□□□□□ -1.53
RNU4-82P-201ENST00000362443 ERCC6L2Q5T890 1561 aa5.48□□□□□ -1.53
RNU4-82P-201ENST00000362443 MAMSTRQ6ZN01 415 aa5.48□□□□□ -1.53
RNU4-82P-201ENST00000362443 CLASP1Q7Z460 1538 aa5.48□□□□□ -1.53
RNU4-82P-201ENST00000362443 MROH2BQ7Z745 1585 aa5.47□□□□□ -1.53
RNU4-82P-201ENST00000362443 SOCS7O14512 581 aa5.47□□□□□ -1.53
RNU4-82P-201ENST00000362443 ILDR2Q71H61 639 aa5.47□□□□□ -1.53
RNU4-82P-201ENST00000362443 AQRO60306 1485 aaKnown RBP eCLIP5.46□□□□□ -1.53
RNU4-82P-201ENST00000362443 CFTRP13569 1480 aa5.46□□□□□ -1.53
RNU4-82P-201ENST00000362443 HECW2Q9P2P5 1572 aa5.46□□□□□ -1.54
RNU4-82P-201ENST00000362443 CLCN6P51797 869 aa5.45□□□□□ -1.54
RNU4-82P-201ENST00000362443 GAPVD1Q14C86 1478 aa5.45□□□□□ -1.54
RNU4-82P-201ENST00000362443 KIF13AQ9H1H9 1805 aa5.44□□□□□ -1.54
RNU4-82P-201ENST00000362443 TOPBP1Q92547 1522 aa5.41□□□□□ -1.54
RNU4-82P-201ENST00000362443 TARBP1Q13395 1621 aaKnown RBP5.4□□□□□ -1.55
RNU4-82P-201ENST00000362443 SYNJ2O15056 1496 aa5.39□□□□□ -1.55
RNU4-82P-201ENST00000362443 ADGRL1O94910 1474 aa5.39□□□□□ -1.55
RNU4-82P-201ENST00000362443 SYNJ1O43426 1573 aa5.39□□□□□ -1.55
RNU4-82P-201ENST00000362443 KDM6BO15054 1643 aa5.38□□□□□ -1.55
RNU4-82P-201ENST00000362443 SNAPC4Q5SXM2 1469 aa5.38□□□□□ -1.55
RNU4-82P-201ENST00000362443 WIZO95785 1651 aa5.37□□□□□ -1.55
RNU4-82P-201ENST00000362443 CHMP7Q8WUX9 453 aaPredicted RBP5.37□□□□□ -1.55
RNU4-82P-201ENST00000362443 SCUBE2Q9NQ36 999 aa5.37□□□□□ -1.55
RNU4-82P-201ENST00000362443 DISP3Q9P2K9 1392 aa5.37□□□□□ -1.55
RNU4-82P-201ENST00000362443 FAM69CQ0P6D2 419 aa5.36□□□□□ -1.55
RNU4-82P-201ENST00000362443 ABCC10Q5T3U5 1492 aa5.35□□□□□ -1.55
RNU4-82P-201ENST00000362443 TDRD9Q8NDG6 1382 aaKnown RBP5.35□□□□□ -1.55
RNU4-82P-201ENST00000362443 ST18O60284 1047 aa5.35□□□□□ -1.55
RNU4-82P-201ENST00000362443 PRDM2Q13029 1718 aa5.34□□□□□ -1.55
RNU4-82P-201ENST00000362443 CNKSR2Q8WXI2 1034 aa5.34□□□□□ -1.55
RNU4-82P-201ENST00000362443 DNMBPQ6XZF7 1577 aa5.33□□□□□ -1.56
RNU4-82P-201ENST00000362443 RAD54L2Q9Y4B4 1467 aa5.33□□□□□ -1.56
RNU4-82P-201ENST00000362443 ABCC8Q09428 1581 aa5.33□□□□□ -1.56
RNU4-82P-201ENST00000362443 POLA1P09884 1462 aaPredicted RBP5.32□□□□□ -1.56
RNU4-82P-201ENST00000362443 MAGI1Q96QZ7 1491 aaPredicted RBP5.32□□□□□ -1.56
RNU4-82P-201ENST00000362443 DIP2BQ9P265 1576 aa5.32□□□□□ -1.56
RNU4-82P-201ENST00000362443 TSPOAP1O95153 1857 aa5.3□□□□□ -1.56
RNU4-82P-201ENST00000362443 CEP170Q5SW79 1584 aa5.29□□□□□ -1.56
RNU4-82P-201ENST00000362443 CD44P16070 742 aaKnown RBP5.29□□□□□ -1.56
RNU4-82P-201ENST00000362443 PELP1Q8IZL8 1130 aaKnown RBP5.29□□□□□ -1.56
RNU4-82P-201ENST00000362443 SOGA1O94964 1423 aa5.29□□□□□ -1.56
RNU4-82P-201ENST00000362443 GRIN2BQ13224 1484 aa5.28□□□□□ -1.56
RNU4-82P-201ENST00000362443 SPATA31D1Q6ZQQ2 1576 aa5.28□□□□□ -1.56
RNU4-82P-201ENST00000362443 MAPKBP1O60336 1514 aa5.28□□□□□ -1.56
RNU4-82P-201ENST00000362443 WDR97A6NE52 1622 aa5.26□□□□□ -1.57
RNU4-82P-201ENST00000362443 METRNQ9UJH8 293 aa5.26□□□□□ -1.57
RNU4-82P-201ENST00000362443 TOP2AP11388 1531 aaKnown RBP5.26□□□□□ -1.57
RNU4-82P-201ENST00000362443 PPP4R3CPQ6ZMV5 832 aa5.25□□□□□ -1.57
RNU4-82P-201ENST00000362443 SHROOM2Q13796 1616 aa5.25□□□□□ -1.57
RNU4-82P-201ENST00000362443 COL17A1Q9UMD9 1497 aaPredicted RBP5.25□□□□□ -1.57
RNU4-82P-201ENST00000362443 KRTAP3-3Q9BYR6 98 aa5.24□□□□□ -1.57
RNU4-82P-201ENST00000362443 KRTAP3-2Q9BYR7 98 aa5.24□□□□□ -1.57
RNU4-82P-201ENST00000362443 GALR2O43603 387 aaPredicted RBP5.23□□□□□ -1.57
RNU4-82P-201ENST00000362443 NPM1P06748 294 aaKnown RBP eCLIP5.23□□□□□ -1.57
RNU4-82P-201ENST00000362443 APLP2Q06481 763 aa5.23□□□□□ -1.57
RNU4-82P-201ENST00000362443 CERKQ8TCT0 537 aa5.23□□□□□ -1.57
RNU4-82P-201ENST00000362443 PPRC1Q5VV67 1664 aaKnown RBP5.23□□□□□ -1.57
RNU4-82P-201ENST00000362443 PBRM1Q86U86 1689 aa5.23□□□□□ -1.57
RNU4-82P-201ENST00000362443 NUP160Q12769 1436 aa5.23□□□□□ -1.57
RNU4-82P-201ENST00000362443 CCDC88BA6NC98 1476 aa5.22□□□□□ -1.57
RNU4-82P-201ENST00000362443 GRIN2AQ12879 1464 aa5.22□□□□□ -1.57
RNU4-82P-201ENST00000362443 FGD5Q6ZNL6 1462 aa5.22□□□□□ -1.57
RNU4-82P-201ENST00000362443 TOP2BQ02880 1626 aa5.22□□□□□ -1.57
RNU4-82P-201ENST00000362443 ADCY10Q96PN6 1610 aa5.22□□□□□ -1.57
RNU4-82P-201ENST00000362443 PRG4Q92954 1404 aaPredicted RBP5.22□□□□□ -1.57
RNU4-82P-201ENST00000362443 RNF166Q96A37 237 aaPredicted RBP5.2□□□□□ -1.58
RNU4-82P-201ENST00000362443 PCF11O94913 1555 aaKnown RBP5.18□□□□□ -1.58
RNU4-82P-201ENST00000362443 ABCA5Q8WWZ7 1642 aa5.17□□□□□ -1.58
RNU4-82P-201ENST00000362443 CHADLQ6NUI6 762 aa5.17□□□□□ -1.58
RNU4-82P-201ENST00000362443 JPH4Q96JJ6 628 aa5.17□□□□□ -1.58
RNU4-82P-201ENST00000362443 ADAMTS12P58397 1594 aa5.16□□□□□ -1.58
RNU4-82P-201ENST00000362443 PTPRMP28827 1452 aa5.16□□□□□ -1.58
RNU4-82P-201ENST00000362443 CUX1P39880 1505 aa5.16□□□□□ -1.58
RNU4-82P-201ENST00000362443 GLI2P10070 1586 aa5.16□□□□□ -1.58
RNU4-82P-201ENST00000362443 HSPA2P54652 639 aa5.15□□□□□ -1.59
RNU4-82P-201ENST00000362443 KIF21BO75037 1637 aa5.14□□□□□ -1.59
RNU4-82P-201ENST00000362443 ASXL2Q76L83 1435 aa5.14□□□□□ -1.59
RNU4-82P-201ENST00000362443 ABCA10Q8WWZ4 1543 aa5.13□□□□□ -1.59
RNU4-82P-201ENST00000362443 SRCAPQ6ZRS2 3230 aa5.12□□□□□ -1.59
RNU4-82P-201ENST00000362443 ADAMTSL3P82987 1691 aa5.12□□□□□ -1.59
RNU4-82P-201ENST00000362443 ZNF579Q8NAF0 562 aaKnown RBP5.12□□□□□ -1.59
RNU4-82P-201ENST00000362443 FHAD1B1AJZ9 1412 aa5.12□□□□□ -1.59
RNU4-82P-201ENST00000362443 PLB1Q6P1J6 1458 aa5.12□□□□□ -1.59
RNU4-82P-201ENST00000362443 TEX14Q8IWB6 1497 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms