RNA–Protein interactions for RNA: ENST00000361724.3

PCDH11X-203, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,603 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-203ENST00000361724 EID1Q9Y6B2 187 aa4.73□□□□□ -1.65
PCDH11X-203ENST00000361724 TOP2BQ02880 1626 aa4.72□□□□□ -1.65
PCDH11X-203ENST00000361724 NUTM2BA6NNL0 878 aaPredicted RBP4.72□□□□□ -1.65
PCDH11X-203ENST00000361724 NUTM2EB1AL46 878 aaPredicted RBP4.72□□□□□ -1.65
PCDH11X-203ENST00000361724 NUTM2DQ5VT03 806 aaPredicted RBP4.72□□□□□ -1.65
PCDH11X-203ENST00000361724 NUTM2AQ8IVF1 878 aaPredicted RBP4.72□□□□□ -1.65
PCDH11X-203ENST00000361724 HOXD11P31277 338 aaPredicted RBP4.71□□□□□ -1.65
PCDH11X-203ENST00000361724 ANO8Q9HCE9 1232 aaPredicted RBP4.71□□□□□ -1.65
PCDH11X-203ENST00000361724 CCDC125Q86Z20 511 aa4.7□□□□□ -1.66
PCDH11X-203ENST00000361724 CC2D2AQ9P2K1 1620 aa4.7□□□□□ -1.66
PCDH11X-203ENST00000361724 SENP3-EIF4A1A0A087X0R7 540 aa4.69□□□□□ -1.66
PCDH11X-203ENST00000361724 IFT140Q96RY7 1462 aa4.69□□□□□ -1.66
PCDH11X-203ENST00000361724 MAP3K9P80192 1104 aa4.69□□□□□ -1.66
PCDH11X-203ENST00000361724 RNF39Q9H2S5 420 aa4.69□□□□□ -1.66
PCDH11X-203ENST00000361724 CADPSQ9ULU8 1353 aa4.69□□□□□ -1.66
PCDH11X-203ENST00000361724 GCC1Q96CN9 775 aa4.68□□□□□ -1.66
PCDH11X-203ENST00000361724 IL27Q8NEV9 243 aa4.67□□□□□ -1.66
PCDH11X-203ENST00000361724 BAG6P46379 1132 aa4.67□□□□□ -1.66
PCDH11X-203ENST00000361724 NPM2Q86SE8 214 aaKnown RBP4.67□□□□□ -1.66
PCDH11X-203ENST00000361724 BAZ1AQ9NRL2 1556 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-203ENST00000361724 TMX4Q9H1E5 349 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-203ENST00000361724 CCDC9Q9Y3X0 531 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-203ENST00000361724 PIP4K2BP78356 416 aa4.65□□□□□ -1.66
PCDH11X-203ENST00000361724 PKD2Q13563 968 aa4.65□□□□□ -1.66
PCDH11X-203ENST00000361724 ATP1B4Q9UN42 357 aaPredicted RBP4.65□□□□□ -1.66
PCDH11X-203ENST00000361724 EIF4G1Q04637 1599 aaKnown RBP4.65□□□□□ -1.67
PCDH11X-203ENST00000361724 WDHD1O75717 1129 aaPredicted RBP4.65□□□□□ -1.67
PCDH11X-203ENST00000361724 ZNF710Q8N1W2 664 aa4.64□□□□□ -1.67
PCDH11X-203ENST00000361724 SYNJ1O43426 1573 aa4.64□□□□□ -1.67
PCDH11X-203ENST00000361724 CFAP44Q96MT7 982 aa4.63□□□□□ -1.67
PCDH11X-203ENST00000361724 PTPRKQ15262 1439 aa4.62□□□□□ -1.67
PCDH11X-203ENST00000361724 LAMC3Q9Y6N6 1575 aa4.62□□□□□ -1.67
PCDH11X-203ENST00000361724 YY1P25490 414 aa4.62□□□□□ -1.67
PCDH11X-203ENST00000361724 POLD1P28340 1107 aa4.61□□□□□ -1.67
PCDH11X-203ENST00000361724 RXRBP28702 533 aa4.6□□□□□ -1.67
PCDH11X-203ENST00000361724 PLB1Q6P1J6 1458 aa4.6□□□□□ -1.67
PCDH11X-203ENST00000361724 ATF3P18847 181 aa4.6□□□□□ -1.67
PCDH11X-203ENST00000361724 NCAPD3P42695 1498 aa4.59□□□□□ -1.67
PCDH11X-203ENST00000361724 AKNAQ7Z591 1439 aa4.59□□□□□ -1.67
PCDH11X-203ENST00000361724 THEMISQ8N1K5 641 aaPredicted RBP4.59□□□□□ -1.68
PCDH11X-203ENST00000361724 GIGYF1O75420 1035 aaPredicted RBP4.58□□□□□ -1.68
PCDH11X-203ENST00000361724 ARHGEF6Q15052 776 aa4.58□□□□□ -1.68
PCDH11X-203ENST00000361724 SSFA2P28290 1259 aa4.58□□□□□ -1.68
PCDH11X-203ENST00000361724 ANKLE2Q86XL3 938 aa4.58□□□□□ -1.68
PCDH11X-203ENST00000361724 SYNJ2O15056 1496 aa4.58□□□□□ -1.68
PCDH11X-203ENST00000361724 UHRF1BP1Q6BDS2 1440 aa4.58□□□□□ -1.68
PCDH11X-203ENST00000361724 MLECQ14165 292 aa4.58□□□□□ -1.68
PCDH11X-203ENST00000361724 ATAD2Q6PL18 1390 aa4.57□□□□□ -1.68
PCDH11X-203ENST00000361724 KCNH8Q96L42 1107 aa4.57□□□□□ -1.68
PCDH11X-203ENST00000361724 KRI1Q8N9T8 703 aaKnown RBP4.56□□□□□ -1.68
PCDH11X-203ENST00000361724 GRIN3BO60391 1043 aa4.56□□□□□ -1.68
PCDH11X-203ENST00000361724 CENPBP07199 599 aaPredicted RBP4.55□□□□□ -1.68
PCDH11X-203ENST00000361724 FANCAO15360 1455 aa4.54□□□□□ -1.68
PCDH11X-203ENST00000361724 EIF4G2P78344 907 aaKnown RBP eCLIP4.54□□□□□ -1.68
PCDH11X-203ENST00000361724 RNF216Q9NWF9 866 aaPredicted RBP4.54□□□□□ -1.68
PCDH11X-203ENST00000361724 EFCAB2Q5VUJ9 269 aa4.54□□□□□ -1.68
PCDH11X-203ENST00000361724 FAM83GA6ND36 823 aa4.53□□□□□ -1.68
PCDH11X-203ENST00000361724 PTPRGP23470 1445 aa4.53□□□□□ -1.68
PCDH11X-203ENST00000361724 WDR7Q9Y4E6 1490 aa4.53□□□□□ -1.68
PCDH11X-203ENST00000361724 TNS4Q8IZW8 715 aa4.53□□□□□ -1.68
PCDH11X-203ENST00000361724 KLHL34Q8N239 644 aa4.53□□□□□ -1.68
PCDH11X-203ENST00000361724 HNRNPMP52272 730 aaKnown RBP eCLIP4.52□□□□□ -1.69
PCDH11X-203ENST00000361724 SLC24A1O60721 1099 aa4.52□□□□□ -1.69
PCDH11X-203ENST00000361724 JPH4Q96JJ6 628 aa4.52□□□□□ -1.69
PCDH11X-203ENST00000361724 GAPVD1Q14C86 1478 aa4.52□□□□□ -1.69
PCDH11X-203ENST00000361724 KANK1Q14678 1352 aa4.52□□□□□ -1.69
PCDH11X-203ENST00000361724 GPR162Q16538 588 aa4.52□□□□□ -1.69
PCDH11X-203ENST00000361724 PPP4R3CPQ6ZMV5 832 aa4.52□□□□□ -1.69
PCDH11X-203ENST00000361724 IFFO2Q5TF58 517 aa4.52□□□□□ -1.69
PCDH11X-203ENST00000361724 CNTLNQ9NXG0 1405 aa4.51□□□□□ -1.69
PCDH11X-203ENST00000361724 SLC4A1APQ9BWU0 796 aaKnown RBP4.51□□□□□ -1.69
PCDH11X-203ENST00000361724 ACIN1Q9UKV3 1341 aaKnown RBP4.51□□□□□ -1.69
PCDH11X-203ENST00000361724 FANCD2Q9BXW9 1451 aa4.51□□□□□ -1.69
PCDH11X-203ENST00000361724 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.51□□□□□ -1.69
PCDH11X-203ENST00000361724 SPATA31D1Q6ZQQ2 1576 aa4.51□□□□□ -1.69
PCDH11X-203ENST00000361724 TRIM52Q96A61 297 aa4.51□□□□□ -1.69
PCDH11X-203ENST00000361724 DCAF1Q9Y4B6 1507 aa4.5□□□□□ -1.69
PCDH11X-203ENST00000361724 NPHP1O15259 732 aa4.5□□□□□ -1.69
PCDH11X-203ENST00000361724 CCDC88BA6NC98 1476 aa4.5□□□□□ -1.69
PCDH11X-203ENST00000361724 HMGXB3Q12766 1538 aa4.5□□□□□ -1.69
PCDH11X-203ENST00000361724 ARHGEF11O15085 1522 aa4.5□□□□□ -1.69
PCDH11X-203ENST00000361724 GRIN2BQ13224 1484 aa4.5□□□□□ -1.69
PCDH11X-203ENST00000361724 FYCO1Q9BQS8 1478 aa4.5□□□□□ -1.69
PCDH11X-203ENST00000361724 KDM6BO15054 1643 aa4.49□□□□□ -1.69
PCDH11X-203ENST00000361724 NBPF15Q8N660 670 aa4.49□□□□□ -1.69
PCDH11X-203ENST00000361724 CACNB1Q02641 598 aaPredicted RBP4.49□□□□□ -1.69
PCDH11X-203ENST00000361724 PSME1Q06323 249 aa4.49□□□□□ -1.69
PCDH11X-203ENST00000361724 IQSEC2Q5JU85 1478 aa4.49□□□□□ -1.69
PCDH11X-203ENST00000361724 CLIP1P30622 1438 aa4.49□□□□□ -1.69
PCDH11X-203ENST00000361724 STK32BQ9NY57 414 aa4.49□□□□□ -1.69
PCDH11X-203ENST00000361724 MAGI1Q96QZ7 1491 aaPredicted RBP4.48□□□□□ -1.69
PCDH11X-203ENST00000361724 LRPPRCP42704 1394 aaKnown RBP4.48□□□□□ -1.69
PCDH11X-203ENST00000361724 KIF7Q2M1P5 1343 aa4.48□□□□□ -1.69
PCDH11X-203ENST00000361724 ANKRD13DQ6ZTN6 518 aa4.48□□□□□ -1.69
PCDH11X-203ENST00000361724 PROSER2Q86WR7 435 aaPredicted RBP4.48□□□□□ -1.69
PCDH11X-203ENST00000361724 SOGA1O94964 1423 aa4.48□□□□□ -1.69
PCDH11X-203ENST00000361724 MSH6P52701 1360 aa4.48□□□□□ -1.69
PCDH11X-203ENST00000361724 GOLGA3Q08378 1498 aa4.48□□□□□ -1.69
PCDH11X-203ENST00000361724 SPON1Q9HCB6 807 aa4.48□□□□□ -1.69
PCDH11X-203ENST00000361724 RPRD2Q5VT52 1461 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms