RNA–Protein interactions for RNA: ENST00000361724.3

PCDH11X-203, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,603 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-203ENST00000361724 AEBP2Q6ZN18 517 aaPredicted RBP7.37□□□□□ -1.23
PCDH11X-203ENST00000361724 CHIC1Q5VXU3 224 aa6.72□□□□□ -1.33
PCDH11X-203ENST00000361724 NISCHQ9Y2I1 1504 aa6.09□□□□□ -1.43
PCDH11X-203ENST00000361724 SENP3Q9H4L4 574 aaPredicted RBP6.03□□□□□ -1.44
PCDH11X-203ENST00000361724 PHF23Q9BUL5 403 aaPredicted RBP6.03□□□□□ -1.44
PCDH11X-203ENST00000361724 FAM9AQ8IZU1 332 aaPredicted RBP5.99□□□□□ -1.45
PCDH11X-203ENST00000361724 FOXD1Q16676 465 aa5.87□□□□□ -1.47
PCDH11X-203ENST00000361724 DCAF8L2P0C7V8 631 aa5.83□□□□□ -1.48
PCDH11X-203ENST00000361724 DCAF8L1A6NGE4 600 aa5.61□□□□□ -1.51
PCDH11X-203ENST00000361724 TRIM41Q8WV44 630 aa5.6□□□□□ -1.51
PCDH11X-203ENST00000361724 PABPN1Q86U42 306 aaKnown RBP eCLIP5.59□□□□□ -1.51
PCDH11X-203ENST00000361724 POTEDQ86YR6 584 aa5.58□□□□□ -1.52
PCDH11X-203ENST00000361724 TRHP20396 242 aaPredicted RBP5.56□□□□□ -1.52
PCDH11X-203ENST00000361724 ABCC9O60706 1549 aa5.54□□□□□ -1.52
PCDH11X-203ENST00000361724 DNAJC5Q9H3Z4 198 aa5.53□□□□□ -1.52
PCDH11X-203ENST00000361724 NPM1P06748 294 aaKnown RBP eCLIP5.51□□□□□ -1.53
PCDH11X-203ENST00000361724 ERCC6Q03468 1493 aa5.43□□□□□ -1.54
PCDH11X-203ENST00000361724 PPP6R1Q9UPN7 881 aa5.37□□□□□ -1.55
PCDH11X-203ENST00000361724 RB1CC1Q8TDY2 1594 aa5.33□□□□□ -1.56
PCDH11X-203ENST00000361724 ESF1Q9H501 851 aaKnown RBP5.32□□□□□ -1.56
PCDH11X-203ENST00000361724 CHMP7Q8WUX9 453 aaPredicted RBP5.32□□□□□ -1.56
PCDH11X-203ENST00000361724 MSH5O43196 834 aa5.31□□□□□ -1.56
PCDH11X-203ENST00000361724 OSCARQ8IYS5 282 aa5.29□□□□□ -1.56
PCDH11X-203ENST00000361724 CUX2O14529 1486 aa5.23□□□□□ -1.57
PCDH11X-203ENST00000361724 DMRT2Q9Y5R5 561 aa5.21□□□□□ -1.57
PCDH11X-203ENST00000361724 SHROOM4Q9ULL8 1493 aa5.2□□□□□ -1.58
PCDH11X-203ENST00000361724 ADRA2BP18089 450 aa5.2□□□□□ -1.58
PCDH11X-203ENST00000361724 CECR2Q9BXF3 1484 aa5.18□□□□□ -1.58
PCDH11X-203ENST00000361724 MYT1Q01538 1121 aa5.17□□□□□ -1.58
PCDH11X-203ENST00000361724 MYT1LQ9UL68 1186 aa5.17□□□□□ -1.58
PCDH11X-203ENST00000361724 PIAS4Q8N2W9 510 aaPredicted RBP5.17□□□□□ -1.58
PCDH11X-203ENST00000361724 PLPPR3Q6T4P5 718 aa5.15□□□□□ -1.59
PCDH11X-203ENST00000361724 FBLN2P98095 1184 aa5.14□□□□□ -1.59
PCDH11X-203ENST00000361724 PELP1Q8IZL8 1130 aaKnown RBP5.12□□□□□ -1.59
PCDH11X-203ENST00000361724 NACADO15069 1562 aa5.11□□□□□ -1.59
PCDH11X-203ENST00000361724 PDS5BQ9NTI5 1447 aa5.11□□□□□ -1.59
PCDH11X-203ENST00000361724 HMGB2P26583 209 aaKnown RBP5.09□□□□□ -1.59
PCDH11X-203ENST00000361724 FBXO41Q8TF61 875 aa5.08□□□□□ -1.6
PCDH11X-203ENST00000361724 DISP3Q9P2K9 1392 aa5.08□□□□□ -1.6
PCDH11X-203ENST00000361724 HAP1P54257 671 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-203ENST00000361724 SF3B2Q13435 895 aaKnown RBP5.07□□□□□ -1.6
PCDH11X-203ENST00000361724 SCAF1Q9H7N4 1312 aaKnown RBP5.06□□□□□ -1.6
PCDH11X-203ENST00000361724 ARID4BQ4LE39 1312 aaPredicted RBP5.04□□□□□ -1.6
PCDH11X-203ENST00000361724 LMTK3Q96Q04 1460 aa5.02□□□□□ -1.61
PCDH11X-203ENST00000361724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.01□□□□□ -1.61
PCDH11X-203ENST00000361724 CCDC180Q9P1Z9 1646 aa5.01□□□□□ -1.61
PCDH11X-203ENST00000361724 CYB5RLQ6IPT4 315 aa5□□□□□ -1.61
PCDH11X-203ENST00000361724 EHMT2Q96KQ7 1210 aa5□□□□□ -1.61
PCDH11X-203ENST00000361724 SOCS7O14512 581 aa4.99□□□□□ -1.61
PCDH11X-203ENST00000361724 MEX3CQ5U5Q3 659 aaKnown RBP4.98□□□□□ -1.61
PCDH11X-203ENST00000361724 BAZ1BQ9UIG0 1483 aaKnown RBP4.95□□□□□ -1.62
PCDH11X-203ENST00000361724 POGZQ7Z3K3 1410 aa4.95□□□□□ -1.62
PCDH11X-203ENST00000361724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-203ENST00000361724 HNRNPUL2Q1KMD3 747 aaKnown RBP4.92□□□□□ -1.62
PCDH11X-203ENST00000361724 ARID3CA6NKF2 412 aa4.92□□□□□ -1.62
PCDH11X-203ENST00000361724 TOM1O60784 492 aa4.91□□□□□ -1.62
PCDH11X-203ENST00000361724 ILDR1Q86SU0 546 aaPredicted RBP4.9□□□□□ -1.62
PCDH11X-203ENST00000361724 HDGFP51858 240 aaKnown RBP4.9□□□□□ -1.63
PCDH11X-203ENST00000361724 ZRANB1Q9UGI0 708 aa4.89□□□□□ -1.63
PCDH11X-203ENST00000361724 BCANQ96GW7 911 aa4.88□□□□□ -1.63
PCDH11X-203ENST00000361724 PPP1R1BQ9UD71 204 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-203ENST00000361724 MAPK8IP2Q13387 824 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-203ENST00000361724 CDK11AQ9UQ88 783 aaPredicted RBP4.86□□□□□ -1.63
PCDH11X-203ENST00000361724 DNAJC5BQ9UF47 199 aa4.85□□□□□ -1.63
PCDH11X-203ENST00000361724 STAG3Q9UJ98 1225 aa4.84□□□□□ -1.63
PCDH11X-203ENST00000361724 TTBK1Q5TCY1 1321 aaPredicted RBP4.84□□□□□ -1.64
PCDH11X-203ENST00000361724 C14orf37Q86TY3 774 aa4.83□□□□□ -1.64
PCDH11X-203ENST00000361724 RSF1Q96T23 1441 aaPredicted RBP4.83□□□□□ -1.64
PCDH11X-203ENST00000361724 ABCC8Q09428 1581 aa4.83□□□□□ -1.64
PCDH11X-203ENST00000361724 FAM69CQ0P6D2 419 aa4.83□□□□□ -1.64
PCDH11X-203ENST00000361724 PPP1R15AO75807 674 aaPredicted RBP4.82□□□□□ -1.64
PCDH11X-203ENST00000361724 NGLY1Q96IV0 654 aa4.81□□□□□ -1.64
PCDH11X-203ENST00000361724 CSRNP3Q8WYN3 585 aa4.81□□□□□ -1.64
PCDH11X-203ENST00000361724 PLEKHD1A6NEE1 506 aa4.8□□□□□ -1.64
PCDH11X-203ENST00000361724 BICRAQ9NZM4 1560 aa4.8□□□□□ -1.64
PCDH11X-203ENST00000361724 UBAP1LF5GYI3 381 aa4.79□□□□□ -1.64
PCDH11X-203ENST00000361724 MYO15BQ96JP2 1530 aa4.79□□□□□ -1.64
PCDH11X-203ENST00000361724 A0A0G2JS52 829 aa4.79□□□□□ -1.64
PCDH11X-203ENST00000361724 C16orf71Q8IYS4 520 aaPredicted RBP4.79□□□□□ -1.64
PCDH11X-203ENST00000361724 TEX14Q8IWB6 1497 aa4.78□□□□□ -1.64
PCDH11X-203ENST00000361724 SMARCA2P51531 1590 aa4.78□□□□□ -1.64
PCDH11X-203ENST00000361724 SCRIBQ14160 1630 aa4.77□□□□□ -1.65
PCDH11X-203ENST00000361724 CARMIL2Q6F5E8 1435 aa4.77□□□□□ -1.65
PCDH11X-203ENST00000361724 NBPF8Q3BBV2 869 aa4.76□□□□□ -1.65
PCDH11X-203ENST00000361724 NBPF14Q5TI25 921 aa4.76□□□□□ -1.65
PCDH11X-203ENST00000361724 CERKQ8TCT0 537 aa4.76□□□□□ -1.65
PCDH11X-203ENST00000361724 ZNF772Q68DY9 489 aaPredicted RBP4.76□□□□□ -1.65
PCDH11X-203ENST00000361724 MRC2Q9UBG0 1479 aa4.76□□□□□ -1.65
PCDH11X-203ENST00000361724 ERICH6Q7L0X2 663 aa4.76□□□□□ -1.65
PCDH11X-203ENST00000361724 ERCC6L2Q5T890 1561 aa4.75□□□□□ -1.65
PCDH11X-203ENST00000361724 CEP164Q9UPV0 1460 aa4.75□□□□□ -1.65
PCDH11X-203ENST00000361724 C11orf95C9JLR9 678 aaPredicted RBP4.74□□□□□ -1.65
PCDH11X-203ENST00000361724 AIDAQ96BJ3 306 aa4.74□□□□□ -1.65
PCDH11X-203ENST00000361724 WASHC2AQ641Q2 1341 aa4.74□□□□□ -1.65
PCDH11X-203ENST00000361724 APLP2Q06481 763 aa4.74□□□□□ -1.65
PCDH11X-203ENST00000361724 PHLDB1Q86UU1 1377 aa4.73□□□□□ -1.65
PCDH11X-203ENST00000361724 RBM33Q96EV2 1170 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-203ENST00000361724 PCDH10Q9P2E7 1040 aa4.73□□□□□ -1.65
PCDH11X-203ENST00000361724 AATKQ6ZMQ8 1374 aa4.73□□□□□ -1.65
PCDH11X-203ENST00000361724 BEGAINQ9BUH8 593 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 2189.5 ms