RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
EPHB4-202ENST00000360620 BCL11AQ9H165 835 aa16.49■□□□□ 0.23
EPHB4-202ENST00000360620 RAB3GAP2Q9H2M9 1393 aa16.47■□□□□ 0.23
EPHB4-202ENST00000360620 ZNF326Q5BKZ1 582 aaKnown RBP16.46■□□□□ 0.23
EPHB4-202ENST00000360620 PEG3Q9GZU2 1588 aa16.46■□□□□ 0.23
EPHB4-202ENST00000360620 FBLN2P98095 1184 aa16.44■□□□□ 0.22
EPHB4-202ENST00000360620 DAXXQ9UER7 740 aaPredicted RBP16.43■□□□□ 0.22
EPHB4-202ENST00000360620 ANP32AP39687 249 aaKnown RBP16.42■□□□□ 0.22
EPHB4-202ENST00000360620 MRS2Q9HD23 443 aa16.42■□□□□ 0.22
EPHB4-202ENST00000360620 CCER2I3L3R5 266 aa16.41■□□□□ 0.22
EPHB4-202ENST00000360620 CHIC2Q9UKJ5 165 aa16.41■□□□□ 0.22
EPHB4-202ENST00000360620 SETD5Q9C0A6 1442 aa16.41■□□□□ 0.22
EPHB4-202ENST00000360620 NBR1Q14596 966 aa16.39■□□□□ 0.21
EPHB4-202ENST00000360620 MTUS2Q5JR59 1369 aa16.39■□□□□ 0.21
EPHB4-202ENST00000360620 TIMELESSQ9UNS1 1208 aa16.38■□□□□ 0.21
EPHB4-202ENST00000360620 SYNJ1O43426 1573 aa16.37■□□□□ 0.21
EPHB4-202ENST00000360620 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
EPHB4-202ENST00000360620 PRKCSHP14314 528 aaPredicted RBP16.36■□□□□ 0.21
EPHB4-202ENST00000360620 EIF4G2P78344 907 aaKnown RBP eCLIP16.36■□□□□ 0.21
EPHB4-202ENST00000360620 KIF21BO75037 1637 aa16.33■□□□□ 0.21
EPHB4-202ENST00000360620 CCDC136Q96JN2 1154 aa16.33■□□□□ 0.2
EPHB4-202ENST00000360620 RRP7BPQ9NSQ0 103 aa16.33■□□□□ 0.2
EPHB4-202ENST00000360620 NPM2Q86SE8 214 aaKnown RBP16.32■□□□□ 0.2
EPHB4-202ENST00000360620 PPP1R15AO75807 674 aaPredicted RBP16.31■□□□□ 0.2
EPHB4-202ENST00000360620 PPP4R2Q9NY27 417 aa16.3■□□□□ 0.2
EPHB4-202ENST00000360620 CUX2O14529 1486 aa16.29■□□□□ 0.2
EPHB4-202ENST00000360620 B4GALNT3Q6L9W6 998 aa16.28■□□□□ 0.2
EPHB4-202ENST00000360620 FHAD1B1AJZ9 1412 aa16.26■□□□□ 0.19
EPHB4-202ENST00000360620 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
EPHB4-202ENST00000360620 ZBTB47Q9UFB7 747 aaPredicted RBP16.25■□□□□ 0.19
EPHB4-202ENST00000360620 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
EPHB4-202ENST00000360620 SENP3-EIF4A1A0A087X0R7 540 aa16.23■□□□□ 0.19
EPHB4-202ENST00000360620 TMC1Q8TDI8 760 aa16.21■□□□□ 0.19
EPHB4-202ENST00000360620 SALL2Q9Y467 1007 aaPredicted RBP16.21■□□□□ 0.18
EPHB4-202ENST00000360620 CADPSQ9ULU8 1353 aa16.19■□□□□ 0.18
EPHB4-202ENST00000360620 NESP48681 1621 aa16.19■□□□□ 0.18
EPHB4-202ENST00000360620 HSPA5P11021 654 aaKnown RBP16.17■□□□□ 0.18
EPHB4-202ENST00000360620 ARHGAP35Q9NRY4 1499 aa16.17■□□□□ 0.18
EPHB4-202ENST00000360620 ARAP1Q96P48 1450 aa16.17■□□□□ 0.18
EPHB4-202ENST00000360620 RRBP1Q9P2E9 1410 aaKnown RBP16.17■□□□□ 0.18
EPHB4-202ENST00000360620 ZNF777Q9ULD5 760 aaPredicted RBP16.16■□□□□ 0.18
EPHB4-202ENST00000360620 NOP58Q9Y2X3 529 aaKnown RBP16.15■□□□□ 0.18
EPHB4-202ENST00000360620 NCAPD3P42695 1498 aa16.14■□□□□ 0.18
EPHB4-202ENST00000360620 SLC4A1APQ9BWU0 796 aaKnown RBP16.14■□□□□ 0.17
EPHB4-202ENST00000360620 DEKP35659 375 aaKnown RBP16.13■□□□□ 0.17
EPHB4-202ENST00000360620 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
EPHB4-202ENST00000360620 ERICH6BQ5W0A0 696 aa16.12■□□□□ 0.17
EPHB4-202ENST00000360620 PHLDB1Q86UU1 1377 aa16.08■□□□□ 0.16
EPHB4-202ENST00000360620 TOP2BQ02880 1626 aa16.08■□□□□ 0.16
EPHB4-202ENST00000360620 PRXQ9BXM0 1461 aa16.06■□□□□ 0.16
EPHB4-202ENST00000360620 FHOD3Q2V2M9 1422 aa16.06■□□□□ 0.16
EPHB4-202ENST00000360620 FANCIQ9NVI1 1328 aa16.06■□□□□ 0.16
EPHB4-202ENST00000360620 CUX1P39880 1505 aa16.05■□□□□ 0.16
EPHB4-202ENST00000360620 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
EPHB4-202ENST00000360620 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
EPHB4-202ENST00000360620 FOXD1Q16676 465 aa16.04■□□□□ 0.16
EPHB4-202ENST00000360620 KDM2AQ9Y2K7 1162 aa16.04■□□□□ 0.16
EPHB4-202ENST00000360620 CC2D2AQ9P2K1 1620 aa16.04■□□□□ 0.16
EPHB4-202ENST00000360620 IGF1RP08069 1367 aa16.04■□□□□ 0.16
EPHB4-202ENST00000360620 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
EPHB4-202ENST00000360620 HMGXB3Q12766 1538 aa16.02■□□□□ 0.16
EPHB4-202ENST00000360620 BIVM-ERCC5R4GMW8 1640 aa16.02■□□□□ 0.15
EPHB4-202ENST00000360620 CFTRP13569 1480 aa16■□□□□ 0.15
EPHB4-202ENST00000360620 WDR97A6NE52 1622 aa16■□□□□ 0.15
EPHB4-202ENST00000360620 L3MBTL2Q969R5 705 aa15.99■□□□□ 0.15
EPHB4-202ENST00000360620 LRRC9Q6ZRR7 1453 aa15.99■□□□□ 0.15
EPHB4-202ENST00000360620 FMN1Q68DA7 1419 aa15.99■□□□□ 0.15
EPHB4-202ENST00000360620 LAS1LQ9Y4W2 734 aaKnown RBP15.98■□□□□ 0.15
EPHB4-202ENST00000360620 CCDC18Q5T9S5 1454 aa15.97■□□□□ 0.15
EPHB4-202ENST00000360620 MPHOSPH9Q99550 1183 aa15.97■□□□□ 0.15
EPHB4-202ENST00000360620 PRKRIP1Q9H875 184 aaPredicted RBP15.97■□□□□ 0.15
EPHB4-202ENST00000360620 EIF5BO60841 1220 aaKnown RBP15.96■□□□□ 0.15
EPHB4-202ENST00000360620 CHMP7Q8WUX9 453 aaPredicted RBP15.96■□□□□ 0.14
EPHB4-202ENST00000360620 RTN4Q9NQC3 1192 aaKnown RBP15.94■□□□□ 0.14
EPHB4-202ENST00000360620 NEFMP07197 916 aa15.93■□□□□ 0.14
EPHB4-202ENST00000360620 CARD11Q9BXL7 1154 aa15.92■□□□□ 0.14
EPHB4-202ENST00000360620 ZBED9Q6R2W3 1325 aa15.91■□□□□ 0.14
EPHB4-202ENST00000360620 MSH5O43196 834 aa15.9■□□□□ 0.14
EPHB4-202ENST00000360620 NUDCQ9Y266 331 aa15.9■□□□□ 0.14
EPHB4-202ENST00000360620 WASHC2AQ641Q2 1341 aa15.9■□□□□ 0.14
EPHB4-202ENST00000360620 CANXP27824 592 aaKnown RBP15.9■□□□□ 0.14
EPHB4-202ENST00000360620 IPO9Q96P70 1041 aaKnown RBP15.89■□□□□ 0.13
EPHB4-202ENST00000360620 FGD6Q6ZV73 1430 aa15.88■□□□□ 0.13
EPHB4-202ENST00000360620 UACAQ9BZF9 1416 aa15.88■□□□□ 0.13
EPHB4-202ENST00000360620 PPM1GO15355 546 aaPredicted RBP15.87■□□□□ 0.13
EPHB4-202ENST00000360620 CFDP1Q9UEE9 299 aaPredicted RBP15.87■□□□□ 0.13
EPHB4-202ENST00000360620 TSPY4P0CV99 314 aa15.86■□□□□ 0.13
EPHB4-202ENST00000360620 TSPY10P0CW01 314 aa15.86■□□□□ 0.13
EPHB4-202ENST00000360620 TIAM1Q13009 1591 aa15.86■□□□□ 0.13
EPHB4-202ENST00000360620 DDRGK1Q96HY6 314 aa15.86■□□□□ 0.13
EPHB4-202ENST00000360620 ERCC6Q03468 1493 aa15.85■□□□□ 0.13
EPHB4-202ENST00000360620 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.136e-7■■■■■ 31.1
EPHB4-202ENST00000360620 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
EPHB4-202ENST00000360620 WDR43Q15061 677 aaKnown RBP eCLIP15.82■□□□□ 0.12
EPHB4-202ENST00000360620 RGL3Q3MIN7 710 aa15.82■□□□□ 0.12
EPHB4-202ENST00000360620 CCDC184Q52MB2 194 aa15.82■□□□□ 0.12
EPHB4-202ENST00000360620 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.82■□□□□ 0.12
EPHB4-202ENST00000360620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.124e-6■□□□□ 11.1
EPHB4-202ENST00000360620 MAPKBP1O60336 1514 aa15.81■□□□□ 0.12
EPHB4-202ENST00000360620 CNTLNQ9NXG0 1405 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms