RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 CFAP43Q8NDM7 1665 aa32.61■■■□□ 2.81
CCSER2-202ENST00000359979 NESP48681 1621 aa32.6■■■□□ 2.81
CCSER2-202ENST00000359979 RAB3GAP2Q9H2M9 1393 aa32.6■■■□□ 2.81
CCSER2-202ENST00000359979 ABCA10Q8WWZ4 1543 aa32.59■■■□□ 2.81
CCSER2-202ENST00000359979 SETD5Q9C0A6 1442 aa32.54■■■□□ 2.8
CCSER2-202ENST00000359979 EFCAB5A4FU69 1503 aa32.53■■■□□ 2.8
CCSER2-202ENST00000359979 MAPKBP1O60336 1514 aa32.53■■■□□ 2.8
CCSER2-202ENST00000359979 PCF11O94913 1555 aaKnown RBP32.53■■■□□ 2.8
CCSER2-202ENST00000359979 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
CCSER2-202ENST00000359979 ITGAEP38570 1179 aa32.52■■■□□ 2.8
CCSER2-202ENST00000359979 PHLDB1Q86UU1 1377 aa32.52■■■□□ 2.8
CCSER2-202ENST00000359979 TOPBP1Q92547 1522 aa32.48■■■□□ 2.79
CCSER2-202ENST00000359979 CUL7Q14999 1698 aa32.48■■■□□ 2.79
CCSER2-202ENST00000359979 AQRO60306 1485 aaKnown RBP eCLIP32.47■■■□□ 2.79
CCSER2-202ENST00000359979 POLA1P09884 1462 aaPredicted RBP32.47■■■□□ 2.79
CCSER2-202ENST00000359979 FYCO1Q9BQS8 1478 aa32.47■■■□□ 2.79
CCSER2-202ENST00000359979 RAD54L2Q9Y4B4 1467 aa32.43■■■□□ 2.78
CCSER2-202ENST00000359979 CASKIN1Q8WXD9 1431 aa32.41■■■□□ 2.78
CCSER2-202ENST00000359979 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.4■■■□□ 2.78
CCSER2-202ENST00000359979 FHOD3Q2V2M9 1422 aa32.37■■■□□ 2.77
CCSER2-202ENST00000359979 CTTNBP2Q8WZ74 1663 aa32.36■■■□□ 2.77
CCSER2-202ENST00000359979 FAM50AQ14320 339 aaKnown RBP32.31■■■□□ 2.76
CCSER2-202ENST00000359979 P3H3Q8IVL6 736 aa32.3■■■□□ 2.76
CCSER2-202ENST00000359979 TIMELESSQ9UNS1 1208 aa32.29■■■□□ 2.76
CCSER2-202ENST00000359979 FMN1Q68DA7 1419 aa32.28■■■□□ 2.76
CCSER2-202ENST00000359979 PDS5BQ9NTI5 1447 aa32.28■■■□□ 2.76
CCSER2-202ENST00000359979 WDR97A6NE52 1622 aa32.27■■■□□ 2.76
CCSER2-202ENST00000359979 KIF21AQ7Z4S6 1674 aa32.2■■■□□ 2.74
CCSER2-202ENST00000359979 SNAPC4Q5SXM2 1469 aa32.19■■■□□ 2.74
CCSER2-202ENST00000359979 ATP1B4Q9UN42 357 aaPredicted RBP32.19■■■□□ 2.74
CCSER2-202ENST00000359979 URB2Q14146 1524 aaKnown RBP32.17■■■□□ 2.74
CCSER2-202ENST00000359979 ABCA5Q8WWZ7 1642 aa32.16■■■□□ 2.74
CCSER2-202ENST00000359979 SAMD9Q5K651 1589 aa32.15■■■□□ 2.74
CCSER2-202ENST00000359979 FGD6Q6ZV73 1430 aa32.14■■■□□ 2.74
CCSER2-202ENST00000359979 SIN3AQ96ST3 1273 aa32.09■■■□□ 2.73
CCSER2-202ENST00000359979 THOC2Q8NI27 1593 aaKnown RBP32.08■■■□□ 2.73
CCSER2-202ENST00000359979 ERCC6Q03468 1493 aa32.07■■■□□ 2.72
CCSER2-202ENST00000359979 GAPVD1Q14C86 1478 aa32.04■■■□□ 2.72
CCSER2-202ENST00000359979 MTUS2Q5JR59 1369 aa32.03■■■□□ 2.72
CCSER2-202ENST00000359979 GRIN2BQ13224 1484 aa32.01■■■□□ 2.72
CCSER2-202ENST00000359979 HFM1A2PYH4 1435 aa32■■■□□ 2.71
CCSER2-202ENST00000359979 PPP1R15AO75807 674 aaPredicted RBP31.98■■■□□ 2.71
CCSER2-202ENST00000359979 SUPT16HQ9Y5B9 1047 aaKnown RBP31.98■■■□□ 2.71
CCSER2-202ENST00000359979 TDRD9Q8NDG6 1382 aaKnown RBP31.98■■■□□ 2.71
CCSER2-202ENST00000359979 CCDC18Q5T9S5 1454 aa31.96■■■□□ 2.71
CCSER2-202ENST00000359979 LRRIQ1Q96JM4 1722 aa31.95■■■□□ 2.71
CCSER2-202ENST00000359979 MYOM3Q5VTT5 1437 aa31.94■■■□□ 2.7
CCSER2-202ENST00000359979 UACAQ9BZF9 1416 aa31.94■■■□□ 2.7
CCSER2-202ENST00000359979 MYT1Q01538 1121 aa31.94■■■□□ 2.7
CCSER2-202ENST00000359979 EHBP1L1Q8N3D4 1523 aa31.94■■■□□ 2.7
CCSER2-202ENST00000359979 NCOA2Q15596 1464 aa31.94■■■□□ 2.7
CCSER2-202ENST00000359979 PTPN23Q9H3S7 1636 aa31.93■■■□□ 2.7
CCSER2-202ENST00000359979 SUPT6HQ7KZ85 1726 aaKnown RBP31.92■■■□□ 2.7
CCSER2-202ENST00000359979 PTPRKQ15262 1439 aa31.9■■■□□ 2.7
CCSER2-202ENST00000359979 MRC2Q9UBG0 1479 aa31.9■■■□□ 2.7
CCSER2-202ENST00000359979 DDX10Q13206 875 aaKnown RBP31.87■■■□□ 2.69
CCSER2-202ENST00000359979 ARHGEF11O15085 1522 aa31.85■■■□□ 2.69
CCSER2-202ENST00000359979 NAIPQ13075 1403 aa31.84■■■□□ 2.69
CCSER2-202ENST00000359979 TONSLQ96HA7 1378 aa31.83■■■□□ 2.69
CCSER2-202ENST00000359979 UGGT2Q9NYU1 1516 aa31.83■■■□□ 2.69
CCSER2-202ENST00000359979 TARBP1Q13395 1621 aaKnown RBP31.83■■■□□ 2.69
CCSER2-202ENST00000359979 KCNH8Q96L42 1107 aa31.82■■■□□ 2.68
CCSER2-202ENST00000359979 WDR62O43379 1518 aa31.77■■■□□ 2.68
CCSER2-202ENST00000359979 CCER2I3L3R5 266 aa31.77■■■□□ 2.68
CCSER2-202ENST00000359979 TCOF1Q13428 1488 aaKnown RBP31.75■■■□□ 2.67
CCSER2-202ENST00000359979 HECW1Q76N89 1606 aa31.73■■■□□ 2.67
CCSER2-202ENST00000359979 MAGI3Q5TCQ9 1506 aa31.71■■■□□ 2.67
CCSER2-202ENST00000359979 AKNAQ7Z591 1439 aa31.69■■■□□ 2.66
CCSER2-202ENST00000359979 PBRM1Q86U86 1689 aa31.68■■■□□ 2.66
CCSER2-202ENST00000359979 ANP32CO43423 234 aa31.67■■■□□ 2.66
CCSER2-202ENST00000359979 IQGAP2Q13576 1575 aa31.66■■■□□ 2.66
CCSER2-202ENST00000359979 GCC2Q8IWJ2 1684 aa31.66■■■□□ 2.66
CCSER2-202ENST00000359979 ADAMTS12P58397 1594 aa31.63■■■□□ 2.65
CCSER2-202ENST00000359979 KDM5BQ9UGL1 1544 aa31.63■■■□□ 2.65
CCSER2-202ENST00000359979 EPRSP07814 1512 aaKnown RBP31.61■■■□□ 2.65
CCSER2-202ENST00000359979 MIA2Q96PC5 1412 aa31.61■■■□□ 2.65
CCSER2-202ENST00000359979 HIRIP3Q9BW71 556 aaPredicted RBP31.6■■■□□ 2.65
CCSER2-202ENST00000359979 DENND4BO75064 1496 aaPredicted RBP31.49■■■□□ 2.63
CCSER2-202ENST00000359979 RRP7BPQ9NSQ0 103 aa31.47■■■□□ 2.63
CCSER2-202ENST00000359979 CDK13Q14004 1512 aaKnown RBP31.45■■■□□ 2.63
CCSER2-202ENST00000359979 TSHZ2Q9NRE2 1034 aa31.44■■■□□ 2.62
CCSER2-202ENST00000359979 CHIC2Q9UKJ5 165 aa31.4■■■□□ 2.62
CCSER2-202ENST00000359979 IFT140Q96RY7 1462 aa31.4■■■□□ 2.62
CCSER2-202ENST00000359979 KDM6BO15054 1643 aa31.4■■■□□ 2.62
CCSER2-202ENST00000359979 ROCK1Q13464 1354 aa31.38■■■□□ 2.61
CCSER2-202ENST00000359979 FKBP8Q14318 412 aa31.38■■■□□ 2.61
CCSER2-202ENST00000359979 TRIM52Q96A61 297 aa31.36■■■□□ 2.61
CCSER2-202ENST00000359979 MPHOSPH9Q99550 1183 aa31.35■■■□□ 2.61
CCSER2-202ENST00000359979 NEFLP07196 543 aa31.34■■■□□ 2.61
CCSER2-202ENST00000359979 KIAA0586Q9BVV6 1533 aa31.34■■■□□ 2.61
CCSER2-202ENST00000359979 KIAA0556O60303 1618 aa31.32■■■□□ 2.6
CCSER2-202ENST00000359979 DAPK1P53355 1430 aa31.3■■■□□ 2.6
CCSER2-202ENST00000359979 HSPA5P11021 654 aaKnown RBP31.29■■■□□ 2.6
CCSER2-202ENST00000359979 DNMT1P26358 1616 aaKnown RBP31.29■■■□□ 2.6
CCSER2-202ENST00000359979 ZNF608Q9ULD9 1512 aaPredicted RBP31.29■■■□□ 2.6
CCSER2-202ENST00000359979 DISP1Q96F81 1524 aa31.29■■■□□ 2.6
CCSER2-202ENST00000359979 EIF4G2P78344 907 aaKnown RBP eCLIP31.28■■■□□ 2.6
CCSER2-202ENST00000359979 WASHC2AQ641Q2 1341 aa31.27■■■□□ 2.6
CCSER2-202ENST00000359979 NUP153P49790 1475 aaKnown RBP31.24■■■□□ 2.59
CCSER2-202ENST00000359979 ABCC5O15440 1437 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms