RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 RAB3GAP2Q9H2M9 1393 aa16.97■□□□□ 0.31
COL20A1-201ENST00000358894 ANP32EQ9BTT0 268 aa16.95■□□□□ 0.3
COL20A1-201ENST00000358894 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
COL20A1-201ENST00000358894 RTL5Q5HYW3 569 aaPredicted RBP16.94■□□□□ 0.3
COL20A1-201ENST00000358894 CADPSQ9ULU8 1353 aa16.94■□□□□ 0.3
COL20A1-201ENST00000358894 FAM9BQ8IZU0 186 aa16.94■□□□□ 0.3
COL20A1-201ENST00000358894 SETD5Q9C0A6 1442 aa16.92■□□□□ 0.3
COL20A1-201ENST00000358894 KIF21BO75037 1637 aa16.91■□□□□ 0.3
COL20A1-201ENST00000358894 TDRD9Q8NDG6 1382 aaKnown RBP16.9■□□□□ 0.3
COL20A1-201ENST00000358894 FHOD3Q2V2M9 1422 aa16.88■□□□□ 0.29
COL20A1-201ENST00000358894 IRX6P78412 446 aaPredicted RBP16.88■□□□□ 0.29
COL20A1-201ENST00000358894 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
COL20A1-201ENST00000358894 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
COL20A1-201ENST00000358894 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
COL20A1-201ENST00000358894 SUPT16HQ9Y5B9 1047 aaKnown RBP16.85■□□□□ 0.29
COL20A1-201ENST00000358894 BICRAQ9NZM4 1560 aa16.84■□□□□ 0.29
COL20A1-201ENST00000358894 IGF1RP08069 1367 aa16.84■□□□□ 0.29
COL20A1-201ENST00000358894 ARHGAP35Q9NRY4 1499 aa16.83■□□□□ 0.28
COL20A1-201ENST00000358894 MRS2Q9HD23 443 aa16.82■□□□□ 0.28
COL20A1-201ENST00000358894 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
COL20A1-201ENST00000358894 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
COL20A1-201ENST00000358894 ARAP1Q96P48 1450 aa16.81■□□□□ 0.28
COL20A1-201ENST00000358894 KDM2AQ9Y2K7 1162 aa16.79■□□□□ 0.28
COL20A1-201ENST00000358894 KCNH8Q96L42 1107 aa16.79■□□□□ 0.28
COL20A1-201ENST00000358894 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
COL20A1-201ENST00000358894 FGD5Q6ZNL6 1462 aa16.76■□□□□ 0.27
COL20A1-201ENST00000358894 DAXXQ9UER7 740 aaPredicted RBP16.75■□□□□ 0.27
COL20A1-201ENST00000358894 FOXD1Q16676 465 aa16.75■□□□□ 0.27
COL20A1-201ENST00000358894 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
COL20A1-201ENST00000358894 PRXQ9BXM0 1461 aa16.74■□□□□ 0.27
COL20A1-201ENST00000358894 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
COL20A1-201ENST00000358894 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
COL20A1-201ENST00000358894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL20A1-201ENST00000358894 CFDP1Q9UEE9 299 aaPredicted RBP16.74■□□□□ 0.27
COL20A1-201ENST00000358894 TIMELESSQ9UNS1 1208 aa16.74■□□□□ 0.27
COL20A1-201ENST00000358894 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
COL20A1-201ENST00000358894 PPP1R15AO75807 674 aaPredicted RBP16.74■□□□□ 0.27
COL20A1-201ENST00000358894 EIF5BO60841 1220 aaKnown RBP16.73■□□□□ 0.27
COL20A1-201ENST00000358894 UNC13AQ9UPW8 1703 aa16.73■□□□□ 0.27
COL20A1-201ENST00000358894 TOP2BQ02880 1626 aa16.73■□□□□ 0.27
COL20A1-201ENST00000358894 FMN1Q68DA7 1419 aa16.73■□□□□ 0.27
COL20A1-201ENST00000358894 RAD54L2Q9Y4B4 1467 aa16.71■□□□□ 0.27
COL20A1-201ENST00000358894 CUX1P39880 1505 aa16.7■□□□□ 0.26
COL20A1-201ENST00000358894 CFTRP13569 1480 aa16.7■□□□□ 0.26
COL20A1-201ENST00000358894 PHLDB1Q86UU1 1377 aa16.69■□□□□ 0.26
COL20A1-201ENST00000358894 NBR1Q14596 966 aa16.69■□□□□ 0.26
COL20A1-201ENST00000358894 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
COL20A1-201ENST00000358894 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
COL20A1-201ENST00000358894 PLEKHD1A6NEE1 506 aa16.67■□□□□ 0.26
COL20A1-201ENST00000358894 PDS5BQ9NTI5 1447 aa16.65■□□□□ 0.26
COL20A1-201ENST00000358894 HSPA5P11021 654 aaKnown RBP16.65■□□□□ 0.26
COL20A1-201ENST00000358894 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
COL20A1-201ENST00000358894 RRBP1Q9P2E9 1410 aaKnown RBP16.61■□□□□ 0.25
COL20A1-201ENST00000358894 CCER2I3L3R5 266 aa16.6■□□□□ 0.25
COL20A1-201ENST00000358894 LRRC9Q6ZRR7 1453 aa16.6■□□□□ 0.25
COL20A1-201ENST00000358894 MPHOSPH9Q99550 1183 aa16.6■□□□□ 0.25
COL20A1-201ENST00000358894 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
COL20A1-201ENST00000358894 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
COL20A1-201ENST00000358894 L3MBTL2Q969R5 705 aa16.56■□□□□ 0.24
COL20A1-201ENST00000358894 CCDC136Q96JN2 1154 aa16.56■□□□□ 0.24
COL20A1-201ENST00000358894 CARD11Q9BXL7 1154 aa16.55■□□□□ 0.24
COL20A1-201ENST00000358894 NPM2Q86SE8 214 aaKnown RBP16.54■□□□□ 0.24
COL20A1-201ENST00000358894 NESP48681 1621 aa16.54■□□□□ 0.24
COL20A1-201ENST00000358894 ERCC6Q03468 1493 aa16.53■□□□□ 0.24
COL20A1-201ENST00000358894 CCDC18Q5T9S5 1454 aa16.52■□□□□ 0.24
COL20A1-201ENST00000358894 FGD6Q6ZV73 1430 aa16.5■□□□□ 0.23
COL20A1-201ENST00000358894 PKD2Q13563 968 aa16.5■□□□□ 0.23
COL20A1-201ENST00000358894 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
COL20A1-201ENST00000358894 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
COL20A1-201ENST00000358894 TSHZ2Q9NRE2 1034 aa16.48■□□□□ 0.23
COL20A1-201ENST00000358894 ANP32AP39687 249 aaKnown RBP16.48■□□□□ 0.23
COL20A1-201ENST00000358894 DCAF11Q8TEB1 546 aa16.46■□□□□ 0.23
COL20A1-201ENST00000358894 RTN4Q9NQC3 1192 aaKnown RBP16.46■□□□□ 0.23
COL20A1-201ENST00000358894 B4GALNT3Q6L9W6 998 aa16.46■□□□□ 0.23
COL20A1-201ENST00000358894 CASKIN1Q8WXD9 1431 aa16.45■□□□□ 0.22
COL20A1-201ENST00000358894 TIAM1Q13009 1591 aa16.44■□□□□ 0.22
COL20A1-201ENST00000358894 POLA1P09884 1462 aaPredicted RBP16.43■□□□□ 0.22
COL20A1-201ENST00000358894 MYOM3Q5VTT5 1437 aa16.41■□□□□ 0.22
COL20A1-201ENST00000358894 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
COL20A1-201ENST00000358894 TOPBP1Q92547 1522 aa16.4■□□□□ 0.22
COL20A1-201ENST00000358894 PPP4R2Q9NY27 417 aa16.4■□□□□ 0.22
COL20A1-201ENST00000358894 CC2D2AQ9P2K1 1620 aa16.4■□□□□ 0.22
COL20A1-201ENST00000358894 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
COL20A1-201ENST00000358894 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
COL20A1-201ENST00000358894 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL20A1-201ENST00000358894 NCOA2Q15596 1464 aa16.39■□□□□ 0.21
COL20A1-201ENST00000358894 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
COL20A1-201ENST00000358894 FYCO1Q9BQS8 1478 aa16.38■□□□□ 0.21
COL20A1-201ENST00000358894 UACAQ9BZF9 1416 aa16.38■□□□□ 0.21
COL20A1-201ENST00000358894 NUP155O75694 1391 aa16.38■□□□□ 0.21
COL20A1-201ENST00000358894 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
COL20A1-201ENST00000358894 PRKCSHP14314 528 aaPredicted RBP16.37■□□□□ 0.21
COL20A1-201ENST00000358894 WDR43Q15061 677 aaKnown RBP eCLIP16.36■□□□□ 0.21
COL20A1-201ENST00000358894 JPH4Q96JJ6 628 aa16.35■□□□□ 0.21
COL20A1-201ENST00000358894 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
COL20A1-201ENST00000358894 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
COL20A1-201ENST00000358894 HNRNPMP52272 730 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL20A1-201ENST00000358894 CC2D1BQ5T0F9 858 aaKnown RBP16.34■□□□□ 0.21
COL20A1-201ENST00000358894 CARMIL2Q6F5E8 1435 aa16.34■□□□□ 0.21
COL20A1-201ENST00000358894 ANKRD30AQ9BXX3 1397 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms