RNA–Protein interactions for RNA: ENST00000358064.3

HIST4H4-201, Transcript of histone cluster 4 H4, humanhuman

TSL 1 (best)

Gene HIST4H4, Length 1,918 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-201ENST00000358064 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
HIST4H4-201ENST00000358064 PLCB2Q00722 1185 aa17.04■□□□□ 0.32
HIST4H4-201ENST00000358064 PBRM1Q86U86 1689 aa17.04■□□□□ 0.32
HIST4H4-201ENST00000358064 MAGI1Q96QZ7 1491 aaPredicted RBP17.03■□□□□ 0.32
HIST4H4-201ENST00000358064 CHMP7Q8WUX9 453 aaPredicted RBP17.02■□□□□ 0.32
HIST4H4-201ENST00000358064 CHD1O14646 1710 aa16.99■□□□□ 0.31
HIST4H4-201ENST00000358064 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
HIST4H4-201ENST00000358064 SYNJ2O15056 1496 aa16.98■□□□□ 0.31
HIST4H4-201ENST00000358064 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
HIST4H4-201ENST00000358064 ARXQ96QS3 562 aa16.96■□□□□ 0.3
HIST4H4-201ENST00000358064 FAM9AQ8IZU1 332 aaPredicted RBP16.94■□□□□ 0.3
HIST4H4-201ENST00000358064 RUSC2Q8N2Y8 1516 aa16.94■□□□□ 0.3
HIST4H4-201ENST00000358064 TIMELESSQ9UNS1 1208 aa16.92■□□□□ 0.3
HIST4H4-201ENST00000358064 FHAD1B1AJZ9 1412 aa16.92■□□□□ 0.3
HIST4H4-201ENST00000358064 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
HIST4H4-201ENST00000358064 FKBP8Q14318 412 aa16.92■□□□□ 0.3
HIST4H4-201ENST00000358064 IGF1RP08069 1367 aa16.91■□□□□ 0.3
HIST4H4-201ENST00000358064 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
HIST4H4-201ENST00000358064 EEA1Q15075 1411 aa16.88■□□□□ 0.29
HIST4H4-201ENST00000358064 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
HIST4H4-201ENST00000358064 HAP1P54257 671 aaPredicted RBP16.84■□□□□ 0.29
HIST4H4-201ENST00000358064 CARMIL1Q5VZK9 1371 aa16.82■□□□□ 0.28
HIST4H4-201ENST00000358064 CUL7Q14999 1698 aa16.81■□□□□ 0.28
HIST4H4-201ENST00000358064 CLASP1Q7Z460 1538 aa16.8■□□□□ 0.28
HIST4H4-201ENST00000358064 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
HIST4H4-201ENST00000358064 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
HIST4H4-201ENST00000358064 NUP160Q12769 1436 aa16.78■□□□□ 0.28
HIST4H4-201ENST00000358064 CEP170Q5SW79 1584 aa16.78■□□□□ 0.28
HIST4H4-201ENST00000358064 ARHGEF11O15085 1522 aa16.76■□□□□ 0.27
HIST4H4-201ENST00000358064 ZEB1P37275 1124 aaPredicted RBP16.75■□□□□ 0.27
HIST4H4-201ENST00000358064 RIMBP3CA6NJZ7 1639 aa16.73■□□□□ 0.27
HIST4H4-201ENST00000358064 RIMBP3BA6NNM3 1639 aa16.73■□□□□ 0.27
HIST4H4-201ENST00000358064 RIMBP3Q9UFD9 1639 aa16.73■□□□□ 0.27
HIST4H4-201ENST00000358064 TULP1O00294 542 aaPredicted RBP16.73■□□□□ 0.27
HIST4H4-201ENST00000358064 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
HIST4H4-201ENST00000358064 PRXQ9BXM0 1461 aa16.7■□□□□ 0.26
HIST4H4-201ENST00000358064 PPARGC1BQ86YN6 1023 aaKnown RBP16.69■□□□□ 0.26
HIST4H4-201ENST00000358064 KIF21BO75037 1637 aa16.68■□□□□ 0.26
HIST4H4-201ENST00000358064 CYB5RLQ6IPT4 315 aa16.67■□□□□ 0.26
HIST4H4-201ENST00000358064 JPH4Q96JJ6 628 aa16.67■□□□□ 0.26
HIST4H4-201ENST00000358064 LOC105371045A0A1W2PR82 267 aa16.66■□□□□ 0.26
HIST4H4-201ENST00000358064 KIAA0586Q9BVV6 1533 aa16.66■□□□□ 0.26
HIST4H4-201ENST00000358064 PCGF6Q9BYE7 350 aa16.66■□□□□ 0.26
HIST4H4-201ENST00000358064 GOLGA3Q08378 1498 aa16.64■□□□□ 0.25
HIST4H4-201ENST00000358064 ARAP1Q96P48 1450 aa16.63■□□□□ 0.25
HIST4H4-201ENST00000358064 SHROOM2Q13796 1616 aa16.62■□□□□ 0.25
HIST4H4-201ENST00000358064 PRG4Q92954 1404 aaPredicted RBP16.62■□□□□ 0.25
HIST4H4-201ENST00000358064 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
HIST4H4-201ENST00000358064 UBTFP17480 764 aaKnown RBP16.6■□□□□ 0.25
HIST4H4-201ENST00000358064 IQGAP2Q13576 1575 aa16.58■□□□□ 0.24
HIST4H4-201ENST00000358064 VSIG10Q8N0Z9 540 aa16.55■□□□□ 0.24
HIST4H4-201ENST00000358064 CTTNBP2Q8WZ74 1663 aa16.51■□□□□ 0.23
HIST4H4-201ENST00000358064 TNIKQ9UKE5 1360 aa16.5■□□□□ 0.23
HIST4H4-201ENST00000358064 CARMIL2Q6F5E8 1435 aa16.5■□□□□ 0.23
HIST4H4-201ENST00000358064 HOMEZQ8IX15 550 aa16.48■□□□□ 0.23
HIST4H4-201ENST00000358064 UGGT2Q9NYU1 1516 aa16.47■□□□□ 0.23
HIST4H4-201ENST00000358064 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
HIST4H4-201ENST00000358064 DISP1Q96F81 1524 aa16.45■□□□□ 0.22
HIST4H4-201ENST00000358064 PTPRGP23470 1445 aa16.43■□□□□ 0.22
HIST4H4-201ENST00000358064 ACIN1Q9UKV3 1341 aaKnown RBP16.43■□□□□ 0.22
HIST4H4-201ENST00000358064 GTF3C3Q9Y5Q9 886 aa16.41■□□□□ 0.22
HIST4H4-201ENST00000358064 KIAA0556O60303 1618 aa16.4■□□□□ 0.22
HIST4H4-201ENST00000358064 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
HIST4H4-201ENST00000358064 P3H3Q8IVL6 736 aa16.39■□□□□ 0.21
HIST4H4-201ENST00000358064 FOXD1Q16676 465 aa16.38■□□□□ 0.21
HIST4H4-201ENST00000358064 CENPBP07199 599 aaPredicted RBP16.36■□□□□ 0.21
HIST4H4-201ENST00000358064 CLIP1P30622 1438 aa16.36■□□□□ 0.21
HIST4H4-201ENST00000358064 TRIM26Q12899 539 aaPredicted RBP16.35■□□□□ 0.21
HIST4H4-201ENST00000358064 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.21
HIST4H4-201ENST00000358064 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
HIST4H4-201ENST00000358064 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
HIST4H4-201ENST00000358064 UACAQ9BZF9 1416 aa16.31■□□□□ 0.2
HIST4H4-201ENST00000358064 ARHGAP35Q9NRY4 1499 aa16.3■□□□□ 0.2
HIST4H4-201ENST00000358064 SAMD9Q5K651 1589 aa16.3■□□□□ 0.2
HIST4H4-201ENST00000358064 EFCAB5A4FU69 1503 aa16.29■□□□□ 0.2
HIST4H4-201ENST00000358064 PLB1Q6P1J6 1458 aa16.28■□□□□ 0.2
HIST4H4-201ENST00000358064 KDM2AQ9Y2K7 1162 aa16.27■□□□□ 0.2
HIST4H4-201ENST00000358064 FHOD3Q2V2M9 1422 aa16.27■□□□□ 0.2
HIST4H4-201ENST00000358064 ABCC2Q92887 1545 aa16.26■□□□□ 0.19
HIST4H4-201ENST00000358064 UHRF1BP1LA0JNW5 1464 aa16.25■□□□□ 0.19
HIST4H4-201ENST00000358064 ERICH6Q7L0X2 663 aa16.25■□□□□ 0.19
HIST4H4-201ENST00000358064 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
HIST4H4-201ENST00000358064 ABCA8O94911 1581 aa16.21■□□□□ 0.19
HIST4H4-201ENST00000358064 ARID3CA6NKF2 412 aa16.21■□□□□ 0.19
HIST4H4-201ENST00000358064 MAPKBP1O60336 1514 aa16.19■□□□□ 0.18
HIST4H4-201ENST00000358064 KDM5BQ9UGL1 1544 aa16.19■□□□□ 0.18
HIST4H4-201ENST00000358064 ASXL2Q76L83 1435 aa16.16■□□□□ 0.18
HIST4H4-201ENST00000358064 ZCCHC11Q5TAX3 1644 aaKnown RBP16.16■□□□□ 0.18
HIST4H4-201ENST00000358064 VPS8Q8N3P4 1428 aa16.15■□□□□ 0.18
HIST4H4-201ENST00000358064 RAPGEF6Q8TEU7 1601 aa16.15■□□□□ 0.18
HIST4H4-201ENST00000358064 FMN1Q68DA7 1419 aa16.15■□□□□ 0.18
HIST4H4-201ENST00000358064 FAM69CQ0P6D2 419 aa16.15■□□□□ 0.18
HIST4H4-201ENST00000358064 BCL11AQ9H165 835 aa16.14■□□□□ 0.17
HIST4H4-201ENST00000358064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
HIST4H4-201ENST00000358064 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
HIST4H4-201ENST00000358064 ATP1B4Q9UN42 357 aaPredicted RBP16.13■□□□□ 0.17
HIST4H4-201ENST00000358064 ABCC10Q5T3U5 1492 aa16.13■□□□□ 0.17
HIST4H4-201ENST00000358064 ATP10BO94823 1461 aa16.12■□□□□ 0.17
HIST4H4-201ENST00000358064 NUP153P49790 1475 aaKnown RBP16.12■□□□□ 0.17
HIST4H4-201ENST00000358064 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms