RNA–Protein interactions for RNA: ENST00000357874.3

MDM1-202, Transcript of Mdm1 nuclear protein, humanhuman

TSL 5

Gene MDM1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-202ENST00000357874 ARAP1Q96P48 1450 aa13.27□□□□□ -0.29
MDM1-202ENST00000357874 IGF1RP08069 1367 aa13.26□□□□□ -0.29
MDM1-202ENST00000357874 CYB5RLQ6IPT4 315 aa13.26□□□□□ -0.29
MDM1-202ENST00000357874 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
MDM1-202ENST00000357874 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
MDM1-202ENST00000357874 DMRT2Q9Y5R5 561 aa13.24□□□□□ -0.29
MDM1-202ENST00000357874 CHD1O14646 1710 aa13.24□□□□□ -0.29
MDM1-202ENST00000357874 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
MDM1-202ENST00000357874 CARMIL1Q5VZK9 1371 aa13.22□□□□□ -0.29
MDM1-202ENST00000357874 MAPK8IP2Q13387 824 aaPredicted RBP13.22□□□□□ -0.29
MDM1-202ENST00000357874 POLA1P09884 1462 aaPredicted RBP13.22□□□□□ -0.29
MDM1-202ENST00000357874 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
MDM1-202ENST00000357874 ARHGAP35Q9NRY4 1499 aa13.2□□□□□ -0.3
MDM1-202ENST00000357874 ZNF608Q9ULD9 1512 aaPredicted RBP13.19□□□□□ -0.3
MDM1-202ENST00000357874 CCER1Q8TC90 406 aaPredicted RBP13.19□□□□□ -0.3
MDM1-202ENST00000357874 EFCAB5A4FU69 1503 aa13.18□□□□□ -0.3
MDM1-202ENST00000357874 IFT140Q96RY7 1462 aa13.17□□□□□ -0.3
MDM1-202ENST00000357874 EIF4G3O43432 1585 aaKnown RBP13.17□□□□□ -0.3
MDM1-202ENST00000357874 CTTNBP2Q8WZ74 1663 aa13.17□□□□□ -0.3
MDM1-202ENST00000357874 FHAD1B1AJZ9 1412 aa13.15□□□□□ -0.3
MDM1-202ENST00000357874 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
MDM1-202ENST00000357874 FBLN2P98095 1184 aa13.15□□□□□ -0.3
MDM1-202ENST00000357874 RRBP1Q9P2E9 1410 aaKnown RBP13.12□□□□□ -0.31
MDM1-202ENST00000357874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
MDM1-202ENST00000357874 CFAP43Q8NDM7 1665 aa13.11□□□□□ -0.31
MDM1-202ENST00000357874 TIAM1Q13009 1591 aa13.11□□□□□ -0.31
MDM1-202ENST00000357874 AQRO60306 1485 aaKnown RBP eCLIP13.1□□□□□ -0.31
MDM1-202ENST00000357874 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
MDM1-202ENST00000357874 CLSPNQ9HAW4 1339 aa13.09□□□□□ -0.31
MDM1-202ENST00000357874 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
MDM1-202ENST00000357874 FYCO1Q9BQS8 1478 aa13.05□□□□□ -0.32
MDM1-202ENST00000357874 TTBK1Q5TCY1 1321 aaPredicted RBP13.05□□□□□ -0.32
MDM1-202ENST00000357874 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
MDM1-202ENST00000357874 FMN1Q68DA7 1419 aa13.02□□□□□ -0.33
MDM1-202ENST00000357874 SAMD9Q5K651 1589 aa13.02□□□□□ -0.33
MDM1-202ENST00000357874 CASKIN1Q8WXD9 1431 aa13.01□□□□□ -0.33
MDM1-202ENST00000357874 LRRC9Q6ZRR7 1453 aa13.01□□□□□ -0.33
MDM1-202ENST00000357874 PCF11O94913 1555 aaKnown RBP13.01□□□□□ -0.33
MDM1-202ENST00000357874 PBRM1Q86U86 1689 aa13.01□□□□□ -0.33
MDM1-202ENST00000357874 CCNB3Q8WWL7 1395 aa13□□□□□ -0.33
MDM1-202ENST00000357874 RANGAP1P46060 587 aaPredicted RBP13□□□□□ -0.33
MDM1-202ENST00000357874 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
MDM1-202ENST00000357874 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
MDM1-202ENST00000357874 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.96□□□□□ -0.33
MDM1-202ENST00000357874 ADAMTS12P58397 1594 aa12.94□□□□□ -0.34
MDM1-202ENST00000357874 SCAF1Q9H7N4 1312 aaKnown RBP12.93□□□□□ -0.34
MDM1-202ENST00000357874 FHOD3Q2V2M9 1422 aa12.92□□□□□ -0.34
MDM1-202ENST00000357874 CHMP7Q8WUX9 453 aaPredicted RBP12.92□□□□□ -0.34
MDM1-202ENST00000357874 TDRD9Q8NDG6 1382 aaKnown RBP12.92□□□□□ -0.34
MDM1-202ENST00000357874 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
MDM1-202ENST00000357874 SNAPC4Q5SXM2 1469 aa12.91□□□□□ -0.34
MDM1-202ENST00000357874 CLASP1Q7Z460 1538 aa12.9□□□□□ -0.34
MDM1-202ENST00000357874 DHX57Q6P158 1386 aaKnown RBP12.89□□□□□ -0.35
MDM1-202ENST00000357874 CCDC18Q5T9S5 1454 aa12.89□□□□□ -0.35
MDM1-202ENST00000357874 IQGAP2Q13576 1575 aa12.89□□□□□ -0.35
MDM1-202ENST00000357874 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
MDM1-202ENST00000357874 EHBP1L1Q8N3D4 1523 aa12.87□□□□□ -0.35
MDM1-202ENST00000357874 SUPT6HQ7KZ85 1726 aaKnown RBP12.85□□□□□ -0.35
MDM1-202ENST00000357874 HECW1Q76N89 1606 aa12.85□□□□□ -0.35
MDM1-202ENST00000357874 UGGT2Q9NYU1 1516 aa12.85□□□□□ -0.35
MDM1-202ENST00000357874 PHLDB1Q86UU1 1377 aa12.83□□□□□ -0.36
MDM1-202ENST00000357874 MAGI1Q96QZ7 1491 aaPredicted RBP12.83□□□□□ -0.36
MDM1-202ENST00000357874 LRRIQ1Q96JM4 1722 aa12.82□□□□□ -0.36
MDM1-202ENST00000357874 SETD5Q9C0A6 1442 aa12.82□□□□□ -0.36
MDM1-202ENST00000357874 DIEXFQ68CQ4 756 aaKnown RBP12.82□□□□□ -0.36
MDM1-202ENST00000357874 MTUS2Q5JR59 1369 aa12.8□□□□□ -0.36
MDM1-202ENST00000357874 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
MDM1-202ENST00000357874 SYNJ2O15056 1496 aa12.79□□□□□ -0.36
MDM1-202ENST00000357874 KIAA0586Q9BVV6 1533 aa12.79□□□□□ -0.36
MDM1-202ENST00000357874 RAB3GAP2Q9H2M9 1393 aa12.78□□□□□ -0.36
MDM1-202ENST00000357874 P3H3Q8IVL6 736 aa12.77□□□□□ -0.37
MDM1-202ENST00000357874 KIF13AQ9H1H9 1805 aa12.76□□□□□ -0.37
MDM1-202ENST00000357874 MYOM3Q5VTT5 1437 aa12.76□□□□□ -0.37
MDM1-202ENST00000357874 NCOA2Q15596 1464 aa12.75□□□□□ -0.37
MDM1-202ENST00000357874 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
MDM1-202ENST00000357874 KIAA0556O60303 1618 aa12.74□□□□□ -0.37
MDM1-202ENST00000357874 GRIN2AQ12879 1464 aa12.74□□□□□ -0.37
MDM1-202ENST00000357874 ACIN1Q9UKV3 1341 aaKnown RBP12.74□□□□□ -0.37
MDM1-202ENST00000357874 TCOF1Q13428 1488 aaKnown RBP12.73□□□□□ -0.37
MDM1-202ENST00000357874 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
MDM1-202ENST00000357874 MAPKBP1O60336 1514 aa12.72□□□□□ -0.37
MDM1-202ENST00000357874 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
MDM1-202ENST00000357874 AKNAQ7Z591 1439 aa12.71□□□□□ -0.37
MDM1-202ENST00000357874 MIA2Q96PC5 1412 aa12.71□□□□□ -0.37
MDM1-202ENST00000357874 PTPN23Q9H3S7 1636 aa12.71□□□□□ -0.37
MDM1-202ENST00000357874 ATP1B4Q9UN42 357 aaPredicted RBP12.71□□□□□ -0.37
MDM1-202ENST00000357874 ERCC6L2Q5T890 1561 aa12.71□□□□□ -0.37
MDM1-202ENST00000357874 HFM1A2PYH4 1435 aa12.71□□□□□ -0.38
MDM1-202ENST00000357874 DCAF8L1A6NGE4 600 aa12.7□□□□□ -0.38
MDM1-202ENST00000357874 FAM50AQ14320 339 aaKnown RBP12.7□□□□□ -0.38
MDM1-202ENST00000357874 DISP1Q96F81 1524 aa12.68□□□□□ -0.38
MDM1-202ENST00000357874 GCC2Q8IWJ2 1684 aa12.68□□□□□ -0.38
MDM1-202ENST00000357874 CENPBP07199 599 aaPredicted RBP12.68□□□□□ -0.38
MDM1-202ENST00000357874 RAPGEF6Q8TEU7 1601 aa12.68□□□□□ -0.38
MDM1-202ENST00000357874 TSPOAP1O95153 1857 aa12.68□□□□□ -0.38
MDM1-202ENST00000357874 CEP170Q5SW79 1584 aa12.66□□□□□ -0.38
MDM1-202ENST00000357874 MAGI3Q5TCQ9 1506 aa12.66□□□□□ -0.38
MDM1-202ENST00000357874 NUP160Q12769 1436 aa12.65□□□□□ -0.38
MDM1-202ENST00000357874 UACAQ9BZF9 1416 aa12.64□□□□□ -0.39
MDM1-202ENST00000357874 ITGAEP38570 1179 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms