RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 HMGXB3Q12766 1538 aa10.8□□□□□ -0.68
CD46-204ENST00000357714 SETD5Q9C0A6 1442 aa10.8□□□□□ -0.68
CD46-204ENST00000357714 CCER2I3L3R5 266 aa10.79□□□□□ -0.68
CD46-204ENST00000357714 KIF27Q86VH2 1401 aa10.79□□□□□ -0.68
CD46-204ENST00000357714 MAPKBP1O60336 1514 aa10.79□□□□□ -0.68
CD46-204ENST00000357714 ERICH6Q7L0X2 663 aa10.78□□□□□ -0.68
CD46-204ENST00000357714 ATP1B4Q9UN42 357 aaPredicted RBP10.77□□□□□ -0.69
CD46-204ENST00000357714 WDR97A6NE52 1622 aa10.77□□□□□ -0.69
CD46-204ENST00000357714 ARHGAP35Q9NRY4 1499 aa10.76□□□□□ -0.69
CD46-204ENST00000357714 TIMELESSQ9UNS1 1208 aa10.75□□□□□ -0.69
CD46-204ENST00000357714 NCAPD3P42695 1498 aa10.75□□□□□ -0.69
CD46-204ENST00000357714 CDK11AQ9UQ88 783 aaPredicted RBP10.74□□□□□ -0.69
CD46-204ENST00000357714 MSH5O43196 834 aa10.73□□□□□ -0.69
CD46-204ENST00000357714 IRX6P78412 446 aaPredicted RBP10.73□□□□□ -0.69
CD46-204ENST00000357714 HNRNPUQ00839 825 aaKnown RBP eCLIP10.72□□□□□ -0.69
CD46-204ENST00000357714 PHLDB1Q86UU1 1377 aa10.71□□□□□ -0.7
CD46-204ENST00000357714 BIVM-ERCC5R4GMW8 1640 aa10.71□□□□□ -0.7
CD46-204ENST00000357714 TONSLQ96HA7 1378 aa10.7□□□□□ -0.7
CD46-204ENST00000357714 P3H3Q8IVL6 736 aa10.7□□□□□ -0.7
CD46-204ENST00000357714 CC2D2AQ9P2K1 1620 aa10.68□□□□□ -0.7
CD46-204ENST00000357714 CUX1P39880 1505 aa10.68□□□□□ -0.7
CD46-204ENST00000357714 LRRC9Q6ZRR7 1453 aa10.67□□□□□ -0.7
CD46-204ENST00000357714 FANCIQ9NVI1 1328 aa10.67□□□□□ -0.7
CD46-204ENST00000357714 TIAM1Q13009 1591 aa10.67□□□□□ -0.7
CD46-204ENST00000357714 MAP3K1Q13233 1512 aa10.63□□□□□ -0.71
CD46-204ENST00000357714 IGF1RP08069 1367 aa10.63□□□□□ -0.71
CD46-204ENST00000357714 FHAD1B1AJZ9 1412 aa10.62□□□□□ -0.71
CD46-204ENST00000357714 CARMIL1Q5VZK9 1371 aa10.62□□□□□ -0.71
CD46-204ENST00000357714 PRDM2Q13029 1718 aa10.62□□□□□ -0.71
CD46-204ENST00000357714 PPP4R2Q9NY27 417 aa10.61□□□□□ -0.71
CD46-204ENST00000357714 ERICH6BQ5W0A0 696 aa10.58□□□□□ -0.72
CD46-204ENST00000357714 MYT1LQ9UL68 1186 aa10.58□□□□□ -0.72
CD46-204ENST00000357714 B4GALNT3Q6L9W6 998 aa10.57□□□□□ -0.72
CD46-204ENST00000357714 FAM9BQ8IZU0 186 aa10.57□□□□□ -0.72
CD46-204ENST00000357714 HSPA5P11021 654 aaKnown RBP10.55□□□□□ -0.72
CD46-204ENST00000357714 ANO8Q9HCE9 1232 aaPredicted RBP10.55□□□□□ -0.72
CD46-204ENST00000357714 FHOD3Q2V2M9 1422 aa10.55□□□□□ -0.72
CD46-204ENST00000357714 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
CD46-204ENST00000357714 DEKP35659 375 aaKnown RBP10.55□□□□□ -0.72
CD46-204ENST00000357714 CFTRP13569 1480 aa10.55□□□□□ -0.72
CD46-204ENST00000357714 WASHC2AQ641Q2 1341 aa10.54□□□□□ -0.72
CD46-204ENST00000357714 MRS2Q9HD23 443 aa10.53□□□□□ -0.72
CD46-204ENST00000357714 UACAQ9BZF9 1416 aa10.53□□□□□ -0.72
CD46-204ENST00000357714 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.53□□□□□ -0.723e-6■■□□□ 12.8
CD46-204ENST00000357714 EIF4G2P78344 907 aaKnown RBP eCLIP10.53□□□□□ -0.72
CD46-204ENST00000357714 PCF11O94913 1555 aaKnown RBP10.53□□□□□ -0.72
CD46-204ENST00000357714 NBR1Q14596 966 aa10.53□□□□□ -0.72
CD46-204ENST00000357714 CCDC184Q52MB2 194 aa10.53□□□□□ -0.72
CD46-204ENST00000357714 MTUS2Q5JR59 1369 aa10.52□□□□□ -0.72
CD46-204ENST00000357714 FGD6Q6ZV73 1430 aa10.52□□□□□ -0.73
CD46-204ENST00000357714 NOP58Q9Y2X3 529 aaKnown RBP10.51□□□□□ -0.73
CD46-204ENST00000357714 HFM1A2PYH4 1435 aa10.5□□□□□ -0.73
CD46-204ENST00000357714 RRP7BPQ9NSQ0 103 aa10.49□□□□□ -0.73
CD46-204ENST00000357714 PRKRIP1Q9H875 184 aaPredicted RBP10.49□□□□□ -0.73
CD46-204ENST00000357714 CHIC2Q9UKJ5 165 aa10.49□□□□□ -0.73
CD46-204ENST00000357714 CFAP43Q8NDM7 1665 aa10.48□□□□□ -0.73
CD46-204ENST00000357714 CASKIN1Q8WXD9 1431 aa10.48□□□□□ -0.73
CD46-204ENST00000357714 FYCO1Q9BQS8 1478 aa10.48□□□□□ -0.73
CD46-204ENST00000357714 PTPRKQ15262 1439 aa10.48□□□□□ -0.73
CD46-204ENST00000357714 FGD5Q6ZNL6 1462 aa10.48□□□□□ -0.73
CD46-204ENST00000357714 CNGB1Q14028 1251 aaPredicted RBP10.47□□□□□ -0.73
CD46-204ENST00000357714 ZBED9Q6R2W3 1325 aa10.47□□□□□ -0.73
CD46-204ENST00000357714 FMN1Q68DA7 1419 aa10.47□□□□□ -0.73
CD46-204ENST00000357714 NAIPQ13075 1403 aa10.46□□□□□ -0.73
CD46-204ENST00000357714 CNTLNQ9NXG0 1405 aa10.46□□□□□ -0.73
CD46-204ENST00000357714 PAK3O75914 559 aaPredicted RBP10.45□□□□□ -0.74
CD46-204ENST00000357714 AQRO60306 1485 aaKnown RBP eCLIP10.45□□□□□ -0.745e-23■■■■■ 36
CD46-204ENST00000357714 ANP32AP39687 249 aaKnown RBP10.45□□□□□ -0.74
CD46-204ENST00000357714 RTL5Q5HYW3 569 aaPredicted RBP10.45□□□□□ -0.74
CD46-204ENST00000357714 CCDC136Q96JN2 1154 aa10.44□□□□□ -0.74
CD46-204ENST00000357714 PTPN23Q9H3S7 1636 aa10.44□□□□□ -0.74
CD46-204ENST00000357714 C11orf95C9JLR9 678 aaPredicted RBP10.44□□□□□ -0.74
CD46-204ENST00000357714 L3MBTL2Q969R5 705 aa10.44□□□□□ -0.74
CD46-204ENST00000357714 SALL2Q9Y467 1007 aaPredicted RBP10.44□□□□□ -0.74
CD46-204ENST00000357714 CADPSQ9ULU8 1353 aa10.43□□□□□ -0.74
CD46-204ENST00000357714 CCDC7Q96M83 1385 aa10.43□□□□□ -0.74
CD46-204ENST00000357714 FOXD1Q16676 465 aa10.42□□□□□ -0.74
CD46-204ENST00000357714 POLR3GLQ9BT43 218 aa10.42□□□□□ -0.74
CD46-204ENST00000357714 MYOM3Q5VTT5 1437 aa10.42□□□□□ -0.74
CD46-204ENST00000357714 LAMC3Q9Y6N6 1575 aa10.42□□□□□ -0.74
CD46-204ENST00000357714 ZBTB47Q9UFB7 747 aaPredicted RBP10.41□□□□□ -0.74
CD46-204ENST00000357714 EFCAB5A4FU69 1503 aa10.41□□□□□ -0.74
CD46-204ENST00000357714 KDM5BQ9UGL1 1544 aa10.41□□□□□ -0.74
CD46-204ENST00000357714 NCOA2Q15596 1464 aa10.41□□□□□ -0.74
CD46-204ENST00000357714 MPHOSPH9Q99550 1183 aa10.4□□□□□ -0.74
CD46-204ENST00000357714 SENP3-EIF4A1A0A087X0R7 540 aa10.4□□□□□ -0.75
CD46-204ENST00000357714 IPO9Q96P70 1041 aaKnown RBP10.4□□□□□ -0.75
CD46-204ENST00000357714 RTN4Q9NQC3 1192 aaKnown RBP10.4□□□□□ -0.75
CD46-204ENST00000357714 NCOA1Q15788 1441 aa10.38□□□□□ -0.75
CD46-204ENST00000357714 AKNAQ7Z591 1439 aa10.38□□□□□ -0.75
CD46-204ENST00000357714 RAD54L2Q9Y4B4 1467 aa10.38□□□□□ -0.75
CD46-204ENST00000357714 KIF7Q2M1P5 1343 aa10.38□□□□□ -0.75
CD46-204ENST00000357714 NUDCQ9Y266 331 aa10.37□□□□□ -0.75
CD46-204ENST00000357714 NBPF8Q3BBV2 869 aa10.36□□□□□ -0.75
CD46-204ENST00000357714 SNAPC4Q5SXM2 1469 aa10.35□□□□□ -0.75
CD46-204ENST00000357714 NPM2Q86SE8 214 aaKnown RBP10.35□□□□□ -0.75
CD46-204ENST00000357714 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.35□□□□□ -0.75
CD46-204ENST00000357714 IL27Q8NEV9 243 aa10.34□□□□□ -0.75
CD46-204ENST00000357714 SMG6Q86US8 1419 aaKnown RBP10.34□□□□□ -0.75
CD46-204ENST00000357714 ARID3CA6NKF2 412 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms