RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 GOLGA3Q08378 1498 aa15.81■□□□□ 0.12
CAPN3-205ENST00000357568 MAGI1Q96QZ7 1491 aaPredicted RBP15.81■□□□□ 0.12
CAPN3-205ENST00000357568 TTBK1Q5TCY1 1321 aaPredicted RBP15.79■□□□□ 0.12
CAPN3-205ENST00000357568 CUL7Q14999 1698 aa15.78■□□□□ 0.12
CAPN3-205ENST00000357568 SNAPC4Q5SXM2 1469 aa15.76■□□□□ 0.11
CAPN3-205ENST00000357568 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
CAPN3-205ENST00000357568 IGF1RP08069 1367 aa15.74■□□□□ 0.11
CAPN3-205ENST00000357568 KIF21BO75037 1637 aa15.74■□□□□ 0.11
CAPN3-205ENST00000357568 RUSC2Q8N2Y8 1516 aa15.74■□□□□ 0.11
CAPN3-205ENST00000357568 FHAD1B1AJZ9 1412 aa15.73■□□□□ 0.11
CAPN3-205ENST00000357568 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
CAPN3-205ENST00000357568 SYNJ2O15056 1496 aa15.72■□□□□ 0.11
CAPN3-205ENST00000357568 MIER1Q8N108 512 aa15.69■□□□□ 0.1
CAPN3-205ENST00000357568 CHD1O14646 1710 aa15.68■□□□□ 0.1
CAPN3-205ENST00000357568 CARMIL1Q5VZK9 1371 aa15.66■□□□□ 0.1
CAPN3-205ENST00000357568 PRXQ9BXM0 1461 aa15.64■□□□□ 0.09
CAPN3-205ENST00000357568 GRIN2AQ12879 1464 aa15.64■□□□□ 0.09
CAPN3-205ENST00000357568 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
CAPN3-205ENST00000357568 RAPGEF2Q9Y4G8 1499 aa15.63■□□□□ 0.09
CAPN3-205ENST00000357568 CHMP7Q8WUX9 453 aaPredicted RBP15.62■□□□□ 0.09
CAPN3-205ENST00000357568 YTHDC1Q96MU7 727 aaKnown RBP15.6■□□□□ 0.09
CAPN3-205ENST00000357568 NUP160Q12769 1436 aa15.58■□□□□ 0.08
CAPN3-205ENST00000357568 UBTFP17480 764 aaKnown RBP15.58■□□□□ 0.08
CAPN3-205ENST00000357568 CLIP1P30622 1438 aa15.57■□□□□ 0.08
CAPN3-205ENST00000357568 FBLN2P98095 1184 aa15.56■□□□□ 0.08
CAPN3-205ENST00000357568 CEP170Q5SW79 1584 aa15.55■□□□□ 0.08
CAPN3-205ENST00000357568 OSCARQ8IYS5 282 aa15.55■□□□□ 0.08
CAPN3-205ENST00000357568 CLASP1Q7Z460 1538 aa15.54■□□□□ 0.08
CAPN3-205ENST00000357568 CTTNBP2Q8WZ74 1663 aa15.51■□□□□ 0.07
CAPN3-205ENST00000357568 KIAA0586Q9BVV6 1533 aa15.5■□□□□ 0.07
CAPN3-205ENST00000357568 SUPT16HQ9Y5B9 1047 aaKnown RBP15.49■□□□□ 0.07
CAPN3-205ENST00000357568 SHROOM2Q13796 1616 aa15.46■□□□□ 0.07
CAPN3-205ENST00000357568 BCL11AQ9H165 835 aa15.46■□□□□ 0.07
CAPN3-205ENST00000357568 PRKCSHP14314 528 aaPredicted RBP15.45■□□□□ 0.06
CAPN3-205ENST00000357568 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
CAPN3-205ENST00000357568 DHX57Q6P158 1386 aaKnown RBP15.45■□□□□ 0.06
CAPN3-205ENST00000357568 IQGAP2Q13576 1575 aa15.45■□□□□ 0.06
CAPN3-205ENST00000357568 APLP2Q06481 763 aa15.42■□□□□ 0.06
CAPN3-205ENST00000357568 SLC24A1O60721 1099 aa15.42■□□□□ 0.06
CAPN3-205ENST00000357568 ANP32EQ9BTT0 268 aa15.4■□□□□ 0.06
CAPN3-205ENST00000357568 UGGT2Q9NYU1 1516 aa15.4■□□□□ 0.06
CAPN3-205ENST00000357568 RRBP1Q9P2E9 1410 aaKnown RBP15.38■□□□□ 0.05
CAPN3-205ENST00000357568 TSHZ2Q9NRE2 1034 aa15.37■□□□□ 0.05
CAPN3-205ENST00000357568 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
CAPN3-205ENST00000357568 DNAJC5Q9H3Z4 198 aa15.33■□□□□ 0.05
CAPN3-205ENST00000357568 PRG4Q92954 1404 aaPredicted RBP15.32■□□□□ 0.04
CAPN3-205ENST00000357568 CARMIL2Q6F5E8 1435 aa15.32■□□□□ 0.04
CAPN3-205ENST00000357568 EFCAB5A4FU69 1503 aa15.32■□□□□ 0.04
CAPN3-205ENST00000357568 SAMD9Q5K651 1589 aa15.32■□□□□ 0.04
CAPN3-205ENST00000357568 ARHGEF11O15085 1522 aa15.31■□□□□ 0.04
CAPN3-205ENST00000357568 RIMBP3CA6NJZ7 1639 aa15.31■□□□□ 0.04
CAPN3-205ENST00000357568 RIMBP3BA6NNM3 1639 aa15.31■□□□□ 0.04
CAPN3-205ENST00000357568 KIAA0556O60303 1618 aa15.31■□□□□ 0.04
CAPN3-205ENST00000357568 RIMBP3Q9UFD9 1639 aa15.31■□□□□ 0.04
CAPN3-205ENST00000357568 DISP1Q96F81 1524 aa15.3■□□□□ 0.04
CAPN3-205ENST00000357568 ARAP1Q96P48 1450 aa15.29■□□□□ 0.04
CAPN3-205ENST00000357568 PLPPR3Q6T4P5 718 aa15.28■□□□□ 0.04
CAPN3-205ENST00000357568 ERCC6L2Q5T890 1561 aa15.27■□□□□ 0.03
CAPN3-205ENST00000357568 KCNA4P22459 653 aa15.22■□□□□ 0.03
CAPN3-205ENST00000357568 MAP3K1Q13233 1512 aa15.21■□□□□ 0.03
CAPN3-205ENST00000357568 ARHGAP35Q9NRY4 1499 aa15.21■□□□□ 0.02
CAPN3-205ENST00000357568 CCNB3Q8WWL7 1395 aa15.19■□□□□ 0.02
CAPN3-205ENST00000357568 PTPRGP23470 1445 aa15.18■□□□□ 0.02
CAPN3-205ENST00000357568 MAPKBP1O60336 1514 aa15.15■□□□□ 0.02
CAPN3-205ENST00000357568 TIMELESSQ9UNS1 1208 aa15.15■□□□□ 0.02
CAPN3-205ENST00000357568 FHOD3Q2V2M9 1422 aa15.14■□□□□ 0.01
CAPN3-205ENST00000357568 UHRF1BP1LA0JNW5 1464 aa15.14■□□□□ 0.01
CAPN3-205ENST00000357568 FMN1Q68DA7 1419 aa15.13■□□□□ 0.01
CAPN3-205ENST00000357568 ABCA8O94911 1581 aa15.13■□□□□ 0.01
CAPN3-205ENST00000357568 RANGAP1P46060 587 aaPredicted RBP15.11■□□□□ 0.01
CAPN3-205ENST00000357568 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
CAPN3-205ENST00000357568 CCER2I3L3R5 266 aa15.11■□□□□ 0.01
CAPN3-205ENST00000357568 P3H3Q8IVL6 736 aa15.1■□□□□ 0.01
CAPN3-205ENST00000357568 ABCC2Q92887 1545 aa15.1■□□□□ 0.01
CAPN3-205ENST00000357568 RAPGEF6Q8TEU7 1601 aa15.1■□□□□ 0.01
CAPN3-205ENST00000357568 KANK4Q5T7N3 995 aaPredicted RBP15.1■□□□□ 0.01
CAPN3-205ENST00000357568 ADCY10Q96PN6 1610 aa15.08■□□□□ 0
CAPN3-205ENST00000357568 CYB5RLQ6IPT4 315 aa15.07■□□□□ 0
CAPN3-205ENST00000357568 RAB3GAP2Q9H2M9 1393 aa15.07■□□□□ 0
CAPN3-205ENST00000357568 TIAM1Q13009 1591 aa15.06■□□□□ 0
CAPN3-205ENST00000357568 PLB1Q6P1J6 1458 aa15.05■□□□□ 0
CAPN3-205ENST00000357568 SETD5Q9C0A6 1442 aa15.05■□□□□ 0
CAPN3-205ENST00000357568 HECW1Q76N89 1606 aa15.05■□□□□ 0
CAPN3-205ENST00000357568 NEFLP07196 543 aa15.05■□□□□ 0
CAPN3-205ENST00000357568 ERICH6Q7L0X2 663 aa15.05■□□□□ -0
CAPN3-205ENST00000357568 CASKIN1Q8WXD9 1431 aa15.05■□□□□ -0
CAPN3-205ENST00000357568 FYCO1Q9BQS8 1478 aa15.03■□□□□ -0
CAPN3-205ENST00000357568 KDM5BQ9UGL1 1544 aa15.03■□□□□ -0
CAPN3-205ENST00000357568 FKBP8Q14318 412 aa15.03■□□□□ -0
CAPN3-205ENST00000357568 PPP1R15AO75807 674 aaPredicted RBP15.02■□□□□ -0
CAPN3-205ENST00000357568 PCF11O94913 1555 aaKnown RBP15.02■□□□□ -0
CAPN3-205ENST00000357568 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
CAPN3-205ENST00000357568 NUP153P49790 1475 aaKnown RBP15□□□□□ -0.01
CAPN3-205ENST00000357568 ZCCHC11Q5TAX3 1644 aaKnown RBP15□□□□□ -0.01
CAPN3-205ENST00000357568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.99□□□□□ -0.01
CAPN3-205ENST00000357568 CCDC18Q5T9S5 1454 aa14.98□□□□□ -0.01
CAPN3-205ENST00000357568 CFAP43Q8NDM7 1665 aa14.98□□□□□ -0.01
CAPN3-205ENST00000357568 NPM1P06748 294 aaKnown RBP eCLIP14.98□□□□□ -0.01
CAPN3-205ENST00000357568 FANCIQ9NVI1 1328 aa14.97□□□□□ -0.01
CAPN3-205ENST00000357568 ATP10BO94823 1461 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms