RNA–Protein interactions for RNA: ENST00000356388.8

SPRED2-201, Transcript of sprouty related EVH1 domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SPRED2, Length 4,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED2-201ENST00000356388 DHX57Q6P158 1386 aaKnown RBP17.61■□□□□ 0.41
SPRED2-201ENST00000356388 SUPT16HQ9Y5B9 1047 aaKnown RBP17.6■□□□□ 0.41
SPRED2-201ENST00000356388 KCNH8Q96L42 1107 aa17.59■□□□□ 0.41
SPRED2-201ENST00000356388 CDK11AQ9UQ88 783 aaPredicted RBP17.58■□□□□ 0.41
SPRED2-201ENST00000356388 SYNJ1O43426 1573 aa17.58■□□□□ 0.41
SPRED2-201ENST00000356388 SETD5Q9C0A6 1442 aa17.54■□□□□ 0.4
SPRED2-201ENST00000356388 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
SPRED2-201ENST00000356388 FHAD1B1AJZ9 1412 aa17.52■□□□□ 0.4
SPRED2-201ENST00000356388 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.39
SPRED2-201ENST00000356388 MRS2Q9HD23 443 aa17.52■□□□□ 0.39
SPRED2-201ENST00000356388 KIF21BO75037 1637 aa17.51■□□□□ 0.39
SPRED2-201ENST00000356388 SALL2Q9Y467 1007 aaPredicted RBP17.51■□□□□ 0.39
SPRED2-201ENST00000356388 EIF4G2P78344 907 aaKnown RBP eCLIP17.51■□□□□ 0.395e-8■■■□□ 18.8
SPRED2-201ENST00000356388 FHOD3Q2V2M9 1422 aa17.5■□□□□ 0.39
SPRED2-201ENST00000356388 KDM2AQ9Y2K7 1162 aa17.5■□□□□ 0.39
SPRED2-201ENST00000356388 CADPSQ9ULU8 1353 aa17.49■□□□□ 0.39
SPRED2-201ENST00000356388 FOXD1Q16676 465 aa17.48■□□□□ 0.39
SPRED2-201ENST00000356388 CHMP7Q8WUX9 453 aaPredicted RBP17.45■□□□□ 0.38
SPRED2-201ENST00000356388 IGF1RP08069 1367 aa17.44■□□□□ 0.38
SPRED2-201ENST00000356388 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
SPRED2-201ENST00000356388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.383e-8■□□□□ 9.8
SPRED2-201ENST00000356388 ARHGAP35Q9NRY4 1499 aa17.41■□□□□ 0.38
SPRED2-201ENST00000356388 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
SPRED2-201ENST00000356388 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
SPRED2-201ENST00000356388 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
SPRED2-201ENST00000356388 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
SPRED2-201ENST00000356388 TSPY4P0CV99 314 aa17.35■□□□□ 0.37
SPRED2-201ENST00000356388 TSPY10P0CW01 314 aa17.35■□□□□ 0.37
SPRED2-201ENST00000356388 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
SPRED2-201ENST00000356388 PHLDB1Q86UU1 1377 aa17.33■□□□□ 0.37
SPRED2-201ENST00000356388 HSPA5P11021 654 aaKnown RBP17.32■□□□□ 0.36
SPRED2-201ENST00000356388 RGL3Q3MIN7 710 aa17.32■□□□□ 0.36
SPRED2-201ENST00000356388 FGD5Q6ZNL6 1462 aa17.32■□□□□ 0.36
SPRED2-201ENST00000356388 TIMELESSQ9UNS1 1208 aa17.32■□□□□ 0.36
SPRED2-201ENST00000356388 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
SPRED2-201ENST00000356388 DAXXQ9UER7 740 aaPredicted RBP17.31■□□□□ 0.36
SPRED2-201ENST00000356388 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
SPRED2-201ENST00000356388 PRXQ9BXM0 1461 aa17.3■□□□□ 0.36
SPRED2-201ENST00000356388 NPM2Q86SE8 214 aaKnown RBP17.28■□□□□ 0.36
SPRED2-201ENST00000356388 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
SPRED2-201ENST00000356388 FMN1Q68DA7 1419 aa17.27■□□□□ 0.36
SPRED2-201ENST00000356388 PLEKHD1A6NEE1 506 aa17.26■□□□□ 0.35
SPRED2-201ENST00000356388 CUX1P39880 1505 aa17.26■□□□□ 0.35
SPRED2-201ENST00000356388 CCDC136Q96JN2 1154 aa17.25■□□□□ 0.35
SPRED2-201ENST00000356388 RTL5Q5HYW3 569 aaPredicted RBP17.25■□□□□ 0.35
SPRED2-201ENST00000356388 MPHOSPH9Q99550 1183 aa17.25■□□□□ 0.35
SPRED2-201ENST00000356388 TOP2BQ02880 1626 aa17.24■□□□□ 0.35
SPRED2-201ENST00000356388 CCER2I3L3R5 266 aa17.23■□□□□ 0.35
SPRED2-201ENST00000356388 L3MBTL2Q969R5 705 aa17.23■□□□□ 0.35
SPRED2-201ENST00000356388 TSHZ2Q9NRE2 1034 aa17.23■□□□□ 0.35
SPRED2-201ENST00000356388 CFTRP13569 1480 aa17.22■□□□□ 0.35
SPRED2-201ENST00000356388 CARD11Q9BXL7 1154 aa17.2■□□□□ 0.34
SPRED2-201ENST00000356388 B4GALNT3Q6L9W6 998 aa17.2■□□□□ 0.34
SPRED2-201ENST00000356388 RRBP1Q9P2E9 1410 aaKnown RBP17.19■□□□□ 0.34
SPRED2-201ENST00000356388 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
SPRED2-201ENST00000356388 LRRC9Q6ZRR7 1453 aa17.18■□□□□ 0.34
SPRED2-201ENST00000356388 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
SPRED2-201ENST00000356388 CHGAP10645 457 aaKnown RBP17.16■□□□□ 0.34
SPRED2-201ENST00000356388 ANP32AP39687 249 aaKnown RBP17.15■□□□□ 0.34
SPRED2-201ENST00000356388 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
SPRED2-201ENST00000356388 PKD2Q13563 968 aa17.14■□□□□ 0.33
SPRED2-201ENST00000356388 NBR1Q14596 966 aa17.14■□□□□ 0.33
SPRED2-201ENST00000356388 ANP32EQ9BTT0 268 aa17.14■□□□□ 0.33
SPRED2-201ENST00000356388 RBM19Q9Y4C8 960 aaKnown RBP17.14■□□□□ 0.33
SPRED2-201ENST00000356388 DCAF11Q8TEB1 546 aa17.12■□□□□ 0.33
SPRED2-201ENST00000356388 SENP3Q9H4L4 574 aaPredicted RBP17.12■□□□□ 0.33
SPRED2-201ENST00000356388 NESP48681 1621 aa17.12■□□□□ 0.33
SPRED2-201ENST00000356388 CCDC18Q5T9S5 1454 aa17.11■□□□□ 0.33
SPRED2-201ENST00000356388 FGD6Q6ZV73 1430 aa17.09■□□□□ 0.33
SPRED2-201ENST00000356388 ZNF644Q9H582 1327 aaPredicted RBP17.08■□□□□ 0.32
SPRED2-201ENST00000356388 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
SPRED2-201ENST00000356388 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
SPRED2-201ENST00000356388 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
SPRED2-201ENST00000356388 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
SPRED2-201ENST00000356388 PEG3Q9GZU2 1588 aa17.04■□□□□ 0.32
SPRED2-201ENST00000356388 BCL11AQ9H165 835 aa17.04■□□□□ 0.32
SPRED2-201ENST00000356388 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
SPRED2-201ENST00000356388 CC2D1BQ5T0F9 858 aaKnown RBP17.03■□□□□ 0.32
SPRED2-201ENST00000356388 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
SPRED2-201ENST00000356388 NUP155O75694 1391 aa17■□□□□ 0.31
SPRED2-201ENST00000356388 CASKIN1Q8WXD9 1431 aa16.99■□□□□ 0.31
SPRED2-201ENST00000356388 WDR43Q15061 677 aaKnown RBP eCLIP16.99■□□□□ 0.31
SPRED2-201ENST00000356388 TIAM1Q13009 1591 aa16.99■□□□□ 0.31
SPRED2-201ENST00000356388 HNRNPMP52272 730 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■■■□□ 18.4
SPRED2-201ENST00000356388 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.317e-9■■■■□ 21.2
SPRED2-201ENST00000356388 WDR97A6NE52 1622 aa16.98■□□□□ 0.31
SPRED2-201ENST00000356388 MYOM3Q5VTT5 1437 aa16.98■□□□□ 0.31
SPRED2-201ENST00000356388 PRKRIP1Q9H875 184 aaPredicted RBP16.97■□□□□ 0.31
SPRED2-201ENST00000356388 ZBTB47Q9UFB7 747 aaPredicted RBP16.97■□□□□ 0.31
SPRED2-201ENST00000356388 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
SPRED2-201ENST00000356388 NCOA2Q15596 1464 aa16.96■□□□□ 0.31
SPRED2-201ENST00000356388 UACAQ9BZF9 1416 aa16.96■□□□□ 0.31
SPRED2-201ENST00000356388 WASHC2AQ641Q2 1341 aa16.95■□□□□ 0.3
SPRED2-201ENST00000356388 JPH4Q96JJ6 628 aa16.94■□□□□ 0.3
SPRED2-201ENST00000356388 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
SPRED2-201ENST00000356388 FYCO1Q9BQS8 1478 aa16.9■□□□□ 0.3
SPRED2-201ENST00000356388 ST20-MTHFSA0A0A6YYL1 179 aa16.9■□□□□ 0.3
SPRED2-201ENST00000356388 KNSTRNQ9Y448 316 aa16.89■□□□□ 0.29
SPRED2-201ENST00000356388 CC2D2AQ9P2K1 1620 aa16.89■□□□□ 0.29
SPRED2-201ENST00000356388 CCDC184Q52MB2 194 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms