RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 CCNB3Q8WWL7 1395 aa20.02■□□□□ 0.8
EBF3-201ENST00000355311 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
EBF3-201ENST00000355311 RAB3GAP2Q9H2M9 1393 aa19.96■□□□□ 0.79
EBF3-201ENST00000355311 FHOD3Q2V2M9 1422 aa19.96■□□□□ 0.79
EBF3-201ENST00000355311 DDX10Q13206 875 aaKnown RBP19.95■□□□□ 0.78
EBF3-201ENST00000355311 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
EBF3-201ENST00000355311 PHLDB1Q86UU1 1377 aa19.93■□□□□ 0.78
EBF3-201ENST00000355311 LAMC3Q9Y6N6 1575 aa19.93■□□□□ 0.78
EBF3-201ENST00000355311 CHIC2Q9UKJ5 165 aa19.9■□□□□ 0.78
EBF3-201ENST00000355311 ERICH3Q5RHP9 1530 aa19.9■□□□□ 0.78
EBF3-201ENST00000355311 BCANQ96GW7 911 aa19.87■□□□□ 0.77
EBF3-201ENST00000355311 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
EBF3-201ENST00000355311 BCL11AQ9H165 835 aa19.83■□□□□ 0.77
EBF3-201ENST00000355311 CNGB1Q14028 1251 aaPredicted RBP19.81■□□□□ 0.76
EBF3-201ENST00000355311 RRBP1Q9P2E9 1410 aaKnown RBP19.81■□□□□ 0.76
EBF3-201ENST00000355311 RRP7BPQ9NSQ0 103 aa19.79■□□□□ 0.76
EBF3-201ENST00000355311 SUPT16HQ9Y5B9 1047 aaKnown RBP19.79■□□□□ 0.76
EBF3-201ENST00000355311 TRIM52Q96A61 297 aa19.74■□□□□ 0.75
EBF3-201ENST00000355311 TSHZ2Q9NRE2 1034 aa19.73■□□□□ 0.75
EBF3-201ENST00000355311 SETD5Q9C0A6 1442 aa19.73■□□□□ 0.75
EBF3-201ENST00000355311 LRRC9Q6ZRR7 1453 aa19.72■□□□□ 0.75
EBF3-201ENST00000355311 FOXD1Q16676 465 aa19.72■□□□□ 0.75
EBF3-201ENST00000355311 POLA1P09884 1462 aaPredicted RBP19.71■□□□□ 0.75
EBF3-201ENST00000355311 ANP32EQ9BTT0 268 aa19.7■□□□□ 0.74
EBF3-201ENST00000355311 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
EBF3-201ENST00000355311 DNMBPQ6XZF7 1577 aa19.68■□□□□ 0.74
EBF3-201ENST00000355311 CLSPNQ9HAW4 1339 aa19.67■□□□□ 0.74
EBF3-201ENST00000355311 TIAM1Q13009 1591 aa19.66■□□□□ 0.74
EBF3-201ENST00000355311 TOPBP1Q92547 1522 aa19.65■□□□□ 0.74
EBF3-201ENST00000355311 FBLN2P98095 1184 aa19.64■□□□□ 0.73
EBF3-201ENST00000355311 PCF11O94913 1555 aaKnown RBP19.63■□□□□ 0.73
EBF3-201ENST00000355311 SENP3-EIF4A1A0A087X0R7 540 aa19.62■□□□□ 0.73
EBF3-201ENST00000355311 MAPKBP1O60336 1514 aa19.62■□□□□ 0.73
EBF3-201ENST00000355311 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
EBF3-201ENST00000355311 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
EBF3-201ENST00000355311 KIF21AQ7Z4S6 1674 aa19.58■□□□□ 0.72
EBF3-201ENST00000355311 PDS5BQ9NTI5 1447 aa19.57■□□□□ 0.72
EBF3-201ENST00000355311 PPP1R15AO75807 674 aaPredicted RBP19.56■□□□□ 0.72
EBF3-201ENST00000355311 PTPRKQ15262 1439 aa19.56■□□□□ 0.72
EBF3-201ENST00000355311 URB2Q14146 1524 aaKnown RBP19.55■□□□□ 0.72
EBF3-201ENST00000355311 AQRO60306 1485 aaKnown RBP eCLIP19.55■□□□□ 0.72
EBF3-201ENST00000355311 FKBP8Q14318 412 aa19.53■□□□□ 0.72
EBF3-201ENST00000355311 TONSLQ96HA7 1378 aa19.53■□□□□ 0.72
EBF3-201ENST00000355311 POLR3GLQ9BT43 218 aa19.51■□□□□ 0.71
EBF3-201ENST00000355311 ZNF777Q9ULD5 760 aaPredicted RBP19.51■□□□□ 0.71
EBF3-201ENST00000355311 IRX6P78412 446 aaPredicted RBP19.5■□□□□ 0.71
EBF3-201ENST00000355311 ZNF644Q9H582 1327 aaPredicted RBP19.49■□□□□ 0.71
EBF3-201ENST00000355311 ABCA10Q8WWZ4 1543 aa19.48■□□□□ 0.71
EBF3-201ENST00000355311 GAPVD1Q14C86 1478 aa19.48■□□□□ 0.71
EBF3-201ENST00000355311 ZNF326Q5BKZ1 582 aaKnown RBP19.47■□□□□ 0.71
EBF3-201ENST00000355311 ANP32CO43423 234 aa19.46■□□□□ 0.71
EBF3-201ENST00000355311 FGD6Q6ZV73 1430 aa19.45■□□□□ 0.7
EBF3-201ENST00000355311 CASKIN1Q8WXD9 1431 aa19.44■□□□□ 0.7
EBF3-201ENST00000355311 WDR62O43379 1518 aa19.4■□□□□ 0.7
EBF3-201ENST00000355311 FMN1Q68DA7 1419 aa19.4■□□□□ 0.7
EBF3-201ENST00000355311 CCDC18Q5T9S5 1454 aa19.39■□□□□ 0.69
EBF3-201ENST00000355311 ABCA5Q8WWZ7 1642 aa19.38■□□□□ 0.69
EBF3-201ENST00000355311 NCOA2Q15596 1464 aa19.38■□□□□ 0.69
EBF3-201ENST00000355311 MRC2Q9UBG0 1479 aa19.37■□□□□ 0.69
EBF3-201ENST00000355311 CUL7Q14999 1698 aa19.37■□□□□ 0.69
EBF3-201ENST00000355311 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
EBF3-201ENST00000355311 FYCO1Q9BQS8 1478 aa19.36■□□□□ 0.69
EBF3-201ENST00000355311 HSPA5P11021 654 aaKnown RBP19.35■□□□□ 0.69
EBF3-201ENST00000355311 CCDC184Q52MB2 194 aa19.35■□□□□ 0.69
EBF3-201ENST00000355311 HNRNPUQ00839 825 aaKnown RBP eCLIP19.34■□□□□ 0.69
EBF3-201ENST00000355311 CDK13Q14004 1512 aaKnown RBP19.33■□□□□ 0.69
EBF3-201ENST00000355311 L3MBTL2Q969R5 705 aa19.33■□□□□ 0.68
EBF3-201ENST00000355311 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
EBF3-201ENST00000355311 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
EBF3-201ENST00000355311 MPHOSPH9Q99550 1183 aa19.32■□□□□ 0.68
EBF3-201ENST00000355311 C11orf95C9JLR9 678 aaPredicted RBP19.31■□□□□ 0.68
EBF3-201ENST00000355311 FAM9BQ8IZU0 186 aa19.31■□□□□ 0.68
EBF3-201ENST00000355311 NAIPQ13075 1403 aa19.3■□□□□ 0.68
EBF3-201ENST00000355311 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
EBF3-201ENST00000355311 MAP3K1Q13233 1512 aa19.28■□□□□ 0.68
EBF3-201ENST00000355311 MYOM3Q5VTT5 1437 aa19.28■□□□□ 0.68
EBF3-201ENST00000355311 MAGI3Q5TCQ9 1506 aa19.28■□□□□ 0.68
EBF3-201ENST00000355311 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
EBF3-201ENST00000355311 RBM19Q9Y4C8 960 aaKnown RBP19.27■□□□□ 0.68
EBF3-201ENST00000355311 CHMP7Q8WUX9 453 aaPredicted RBP19.26■□□□□ 0.67
EBF3-201ENST00000355311 CFAP43Q8NDM7 1665 aa19.25■□□□□ 0.67
EBF3-201ENST00000355311 WASHC2AQ641Q2 1341 aa19.24■□□□□ 0.67
EBF3-201ENST00000355311 NEFLP07196 543 aa19.23■□□□□ 0.67
EBF3-201ENST00000355311 NBPF8Q3BBV2 869 aa19.23■□□□□ 0.67
EBF3-201ENST00000355311 LRRIQ1Q96JM4 1722 aa19.22■□□□□ 0.67
EBF3-201ENST00000355311 UACAQ9BZF9 1416 aa19.22■□□□□ 0.67
EBF3-201ENST00000355311 PBRM1Q86U86 1689 aa19.21■□□□□ 0.67
EBF3-201ENST00000355311 HFM1A2PYH4 1435 aa19.21■□□□□ 0.67
EBF3-201ENST00000355311 EFCAB5A4FU69 1503 aa19.21■□□□□ 0.67
EBF3-201ENST00000355311 KDM2AQ9Y2K7 1162 aa19.21■□□□□ 0.67
EBF3-201ENST00000355311 CTTNBP2Q8WZ74 1663 aa19.21■□□□□ 0.67
EBF3-201ENST00000355311 GRIN2BQ13224 1484 aa19.19■□□□□ 0.66
EBF3-201ENST00000355311 KDM6BO15054 1643 aa19.18■□□□□ 0.66
EBF3-201ENST00000355311 EIF4G2P78344 907 aaKnown RBP eCLIP19.18■□□□□ 0.66
EBF3-201ENST00000355311 CFDP1Q9UEE9 299 aaPredicted RBP19.18■□□□□ 0.66
EBF3-201ENST00000355311 IFT140Q96RY7 1462 aa19.17■□□□□ 0.66
EBF3-201ENST00000355311 MSH5O43196 834 aa19.17■□□□□ 0.66
EBF3-201ENST00000355311 PTPN23Q9H3S7 1636 aa19.16■□□□□ 0.66
EBF3-201ENST00000355311 TIMELESSQ9UNS1 1208 aa19.15■□□□□ 0.66
EBF3-201ENST00000355311 EPRSP07814 1512 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms