RNA–Protein interactions for RNA: ENST00000355081.3

KLHL28-201, Transcript of kelch like family member 28, humanhuman

TSL 1 (best) BASIC

Gene KLHL28, Length 2,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-201ENST00000355081 PABPN1Q86U42 306 aaKnown RBP eCLIP7.77□□□□□ -1.17
KLHL28-201ENST00000355081 ARHGAP35Q9NRY4 1499 aa7.76□□□□□ -1.17
KLHL28-201ENST00000355081 CCER2I3L3R5 266 aa7.76□□□□□ -1.17
KLHL28-201ENST00000355081 SETD5Q9C0A6 1442 aa7.75□□□□□ -1.17
KLHL28-201ENST00000355081 TRIM52Q96A61 297 aa7.74□□□□□ -1.17
KLHL28-201ENST00000355081 MSH5O43196 834 aa7.73□□□□□ -1.17
KLHL28-201ENST00000355081 KIF27Q86VH2 1401 aa7.73□□□□□ -1.17
KLHL28-201ENST00000355081 SIN3AQ96ST3 1273 aa7.73□□□□□ -1.17
KLHL28-201ENST00000355081 TIMELESSQ9UNS1 1208 aa7.73□□□□□ -1.17
KLHL28-201ENST00000355081 TIAM1Q13009 1591 aa7.73□□□□□ -1.17
KLHL28-201ENST00000355081 MAP3K1Q13233 1512 aa7.72□□□□□ -1.17
KLHL28-201ENST00000355081 ANP32CO43423 234 aa7.72□□□□□ -1.17
KLHL28-201ENST00000355081 CUX1P39880 1505 aa7.71□□□□□ -1.18
KLHL28-201ENST00000355081 FANCIQ9NVI1 1328 aa7.71□□□□□ -1.18
KLHL28-201ENST00000355081 LRRC9Q6ZRR7 1453 aa7.69□□□□□ -1.18
KLHL28-201ENST00000355081 PHLDB1Q86UU1 1377 aa7.69□□□□□ -1.18
KLHL28-201ENST00000355081 HIRIP3Q9BW71 556 aaPredicted RBP7.69□□□□□ -1.18
KLHL28-201ENST00000355081 FAM50AQ14320 339 aaKnown RBP7.66□□□□□ -1.18
KLHL28-201ENST00000355081 CDK11AQ9UQ88 783 aaPredicted RBP7.66□□□□□ -1.18
KLHL28-201ENST00000355081 CFAP43Q8NDM7 1665 aa7.65□□□□□ -1.18
KLHL28-201ENST00000355081 ERICH6Q7L0X2 663 aa7.64□□□□□ -1.19
KLHL28-201ENST00000355081 HNRNPUQ00839 825 aaKnown RBP eCLIP7.63□□□□□ -1.19
KLHL28-201ENST00000355081 IGF1RP08069 1367 aa7.63□□□□□ -1.19
KLHL28-201ENST00000355081 TONSLQ96HA7 1378 aa7.63□□□□□ -1.19
KLHL28-201ENST00000355081 FHAD1B1AJZ9 1412 aa7.63□□□□□ -1.19
KLHL28-201ENST00000355081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.62□□□□□ -1.19
KLHL28-201ENST00000355081 IRX6P78412 446 aaPredicted RBP7.62□□□□□ -1.19
KLHL28-201ENST00000355081 ERICH6BQ5W0A0 696 aa7.62□□□□□ -1.19
KLHL28-201ENST00000355081 MYT1LQ9UL68 1186 aa7.62□□□□□ -1.19
KLHL28-201ENST00000355081 PCF11O94913 1555 aaKnown RBP7.62□□□□□ -1.19
KLHL28-201ENST00000355081 HMGXB3Q12766 1538 aa7.61□□□□□ -1.19
KLHL28-201ENST00000355081 CFTRP13569 1480 aa7.61□□□□□ -1.19
KLHL28-201ENST00000355081 CARMIL1Q5VZK9 1371 aa7.59□□□□□ -1.19
KLHL28-201ENST00000355081 PPP4R2Q9NY27 417 aa7.59□□□□□ -1.19
KLHL28-201ENST00000355081 NCAPD3P42695 1498 aa7.59□□□□□ -1.2
KLHL28-201ENST00000355081 CCDC18Q5T9S5 1454 aa7.59□□□□□ -1.2
KLHL28-201ENST00000355081 UACAQ9BZF9 1416 aa7.58□□□□□ -1.2
KLHL28-201ENST00000355081 KDM5BQ9UGL1 1544 aa7.58□□□□□ -1.2
KLHL28-201ENST00000355081 FYCO1Q9BQS8 1478 aa7.58□□□□□ -1.2
KLHL28-201ENST00000355081 HFM1A2PYH4 1435 aa7.57□□□□□ -1.2
KLHL28-201ENST00000355081 DEKP35659 375 aaKnown RBP7.57□□□□□ -1.2
KLHL28-201ENST00000355081 FGD6Q6ZV73 1430 aa7.57□□□□□ -1.2
KLHL28-201ENST00000355081 PTPN23Q9H3S7 1636 aa7.57□□□□□ -1.2
KLHL28-201ENST00000355081 WASHC2AQ641Q2 1341 aa7.56□□□□□ -1.2
KLHL28-201ENST00000355081 PRDM2Q13029 1718 aa7.56□□□□□ -1.2
KLHL28-201ENST00000355081 ATP1B4Q9UN42 357 aaPredicted RBP7.56□□□□□ -1.2
KLHL28-201ENST00000355081 FGD5Q6ZNL6 1462 aa7.56□□□□□ -1.2
KLHL28-201ENST00000355081 FHOD3Q2V2M9 1422 aa7.55□□□□□ -1.2
KLHL28-201ENST00000355081 CASKIN1Q8WXD9 1431 aa7.55□□□□□ -1.2
KLHL28-201ENST00000355081 P3H3Q8IVL6 736 aa7.55□□□□□ -1.2
KLHL28-201ENST00000355081 AQRO60306 1485 aaKnown RBP eCLIP7.55□□□□□ -1.2
KLHL28-201ENST00000355081 NCOA2Q15596 1464 aa7.55□□□□□ -1.2
KLHL28-201ENST00000355081 PTPRKQ15262 1439 aa7.55□□□□□ -1.2
KLHL28-201ENST00000355081 B4GALNT3Q6L9W6 998 aa7.54□□□□□ -1.2
KLHL28-201ENST00000355081 EFCAB5A4FU69 1503 aa7.54□□□□□ -1.2
KLHL28-201ENST00000355081 NAIPQ13075 1403 aa7.54□□□□□ -1.2
KLHL28-201ENST00000355081 HSPA5P11021 654 aaKnown RBP7.53□□□□□ -1.2
KLHL28-201ENST00000355081 FOXD1Q16676 465 aa7.53□□□□□ -1.2
KLHL28-201ENST00000355081 CCDC184Q52MB2 194 aa7.53□□□□□ -1.2
KLHL28-201ENST00000355081 CNTLNQ9NXG0 1405 aa7.53□□□□□ -1.2
KLHL28-201ENST00000355081 NOP58Q9Y2X3 529 aaKnown RBP7.53□□□□□ -1.2
KLHL28-201ENST00000355081 ZBED9Q6R2W3 1325 aa7.52□□□□□ -1.2
KLHL28-201ENST00000355081 PRKRIP1Q9H875 184 aaPredicted RBP7.51□□□□□ -1.21
KLHL28-201ENST00000355081 FMN1Q68DA7 1419 aa7.51□□□□□ -1.21
KLHL28-201ENST00000355081 PAK3O75914 559 aaPredicted RBP7.5□□□□□ -1.21
KLHL28-201ENST00000355081 EIF4G2P78344 907 aaKnown RBP eCLIP7.5□□□□□ -1.21
KLHL28-201ENST00000355081 SNAPC4Q5SXM2 1469 aa7.5□□□□□ -1.21
KLHL28-201ENST00000355081 FAM9BQ8IZU0 186 aa7.5□□□□□ -1.21
KLHL28-201ENST00000355081 MTUS2Q5JR59 1369 aa7.5□□□□□ -1.21
KLHL28-201ENST00000355081 NBR1Q14596 966 aa7.49□□□□□ -1.21
KLHL28-201ENST00000355081 MRS2Q9HD23 443 aa7.49□□□□□ -1.21
KLHL28-201ENST00000355081 NCOA1Q15788 1441 aa7.49□□□□□ -1.21
KLHL28-201ENST00000355081 DENND4BO75064 1496 aaPredicted RBP7.49□□□□□ -1.21
KLHL28-201ENST00000355081 CCDC7Q96M83 1385 aa7.49□□□□□ -1.21
KLHL28-201ENST00000355081 MYOM3Q5VTT5 1437 aa7.48□□□□□ -1.21
KLHL28-201ENST00000355081 HECW1Q76N89 1606 aa7.48□□□□□ -1.21
KLHL28-201ENST00000355081 CTTNBP2Q8WZ74 1663 aa7.48□□□□□ -1.21
KLHL28-201ENST00000355081 C11orf95C9JLR9 678 aaPredicted RBP7.47□□□□□ -1.21
KLHL28-201ENST00000355081 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
KLHL28-201ENST00000355081 LRRIQ1Q96JM4 1722 aa7.47□□□□□ -1.21
KLHL28-201ENST00000355081 GCC2Q8IWJ2 1684 aa7.47□□□□□ -1.21
KLHL28-201ENST00000355081 SMG6Q86US8 1419 aaKnown RBP7.46□□□□□ -1.21
KLHL28-201ENST00000355081 CADPSQ9ULU8 1353 aa7.46□□□□□ -1.21
KLHL28-201ENST00000355081 SUPT6HQ7KZ85 1726 aaKnown RBP7.46□□□□□ -1.22
KLHL28-201ENST00000355081 IPO9Q96P70 1041 aaKnown RBP7.46□□□□□ -1.22
KLHL28-201ENST00000355081 AKNAQ7Z591 1439 aa7.45□□□□□ -1.22
KLHL28-201ENST00000355081 ABCA5Q8WWZ7 1642 aa7.45□□□□□ -1.22
KLHL28-201ENST00000355081 CC2D2AQ9P2K1 1620 aa7.45□□□□□ -1.22
KLHL28-201ENST00000355081 ANP32AP39687 249 aaKnown RBP7.45□□□□□ -1.22
KLHL28-201ENST00000355081 CUL7Q14999 1698 aa7.45□□□□□ -1.22
KLHL28-201ENST00000355081 RNF123Q5XPI4 1314 aa7.45□□□□□ -1.22
KLHL28-201ENST00000355081 L3MBTL2Q969R5 705 aa7.44□□□□□ -1.22
KLHL28-201ENST00000355081 EHBP1L1Q8N3D4 1523 aa7.44□□□□□ -1.22
KLHL28-201ENST00000355081 POLR1AO95602 1720 aaPredicted RBP7.44□□□□□ -1.22
KLHL28-201ENST00000355081 THOC2Q8NI27 1593 aaKnown RBP7.44□□□□□ -1.22
KLHL28-201ENST00000355081 ABCA10Q8WWZ4 1543 aa7.44□□□□□ -1.22
KLHL28-201ENST00000355081 UGGT2Q9NYU1 1516 aa7.44□□□□□ -1.22
KLHL28-201ENST00000355081 RRP7BPQ9NSQ0 103 aa7.44□□□□□ -1.22
KLHL28-201ENST00000355081 GRIN2BQ13224 1484 aa7.44□□□□□ -1.22
KLHL28-201ENST00000355081 ARHGEF11O15085 1522 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms