RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 CCDC136Q96JN2 1154 aa23.85■■□□□ 1.41
ARFGAP1-201ENST00000353546 NEFLP07196 543 aa23.84■■□□□ 1.41
ARFGAP1-201ENST00000353546 ARHGAP35Q9NRY4 1499 aa23.83■■□□□ 1.41
ARFGAP1-201ENST00000353546 CUX2O14529 1486 aa23.83■■□□□ 1.41
ARFGAP1-201ENST00000353546 P3H3Q8IVL6 736 aa23.8■■□□□ 1.4
ARFGAP1-201ENST00000353546 NCAPD3P42695 1498 aa23.79■■□□□ 1.4
ARFGAP1-201ENST00000353546 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
ARFGAP1-201ENST00000353546 HMGXB3Q12766 1538 aa23.77■■□□□ 1.4
ARFGAP1-201ENST00000353546 CFTRP13569 1480 aa23.72■■□□□ 1.39
ARFGAP1-201ENST00000353546 RAB3GAP2Q9H2M9 1393 aa23.72■■□□□ 1.39
ARFGAP1-201ENST00000353546 ERICH6BQ5W0A0 696 aa23.68■■□□□ 1.38
ARFGAP1-201ENST00000353546 UBE2Q2Q8WVN8 375 aa23.68■■□□□ 1.38
ARFGAP1-201ENST00000353546 IGF1RP08069 1367 aa23.65■■□□□ 1.38
ARFGAP1-201ENST00000353546 MAPKBP1O60336 1514 aa23.64■■□□□ 1.38
ARFGAP1-201ENST00000353546 CC2D2AQ9P2K1 1620 aa23.64■■□□□ 1.37
ARFGAP1-201ENST00000353546 NBR1Q14596 966 aa23.61■■□□□ 1.37
ARFGAP1-201ENST00000353546 CDK11AQ9UQ88 783 aaPredicted RBP23.61■■□□□ 1.37
ARFGAP1-201ENST00000353546 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
ARFGAP1-201ENST00000353546 FAM50AQ14320 339 aaKnown RBP23.6■■□□□ 1.37
ARFGAP1-201ENST00000353546 TRIM52Q96A61 297 aa23.6■■□□□ 1.37
ARFGAP1-201ENST00000353546 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.6■■□□□ 1.37
ARFGAP1-201ENST00000353546 SETD5Q9C0A6 1442 aa23.59■■□□□ 1.37
ARFGAP1-201ENST00000353546 IL27Q8NEV9 243 aa23.57■■□□□ 1.36
ARFGAP1-201ENST00000353546 MAP3K1Q13233 1512 aa23.56■■□□□ 1.36
ARFGAP1-201ENST00000353546 CARMIL1Q5VZK9 1371 aa23.56■■□□□ 1.36
ARFGAP1-201ENST00000353546 SIN3AQ96ST3 1273 aa23.55■■□□□ 1.36
ARFGAP1-201ENST00000353546 LRRC9Q6ZRR7 1453 aa23.55■■□□□ 1.36
ARFGAP1-201ENST00000353546 PHLDB1Q86UU1 1377 aa23.55■■□□□ 1.36
ARFGAP1-201ENST00000353546 RTN4Q9NQC3 1192 aaKnown RBP23.54■■□□□ 1.36
ARFGAP1-201ENST00000353546 DDX10Q13206 875 aaKnown RBP23.52■■□□□ 1.36
ARFGAP1-201ENST00000353546 HIRIP3Q9BW71 556 aaPredicted RBP23.51■■□□□ 1.35
ARFGAP1-201ENST00000353546 WDR97A6NE52 1622 aa23.49■■□□□ 1.35
ARFGAP1-201ENST00000353546 FGD5Q6ZNL6 1462 aa23.48■■□□□ 1.35
ARFGAP1-201ENST00000353546 IRX6P78412 446 aaPredicted RBP23.47■■□□□ 1.35
ARFGAP1-201ENST00000353546 PAK3O75914 559 aaPredicted RBP23.45■■□□□ 1.34
ARFGAP1-201ENST00000353546 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
ARFGAP1-201ENST00000353546 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
ARFGAP1-201ENST00000353546 FHAD1B1AJZ9 1412 aa23.44■■□□□ 1.34
ARFGAP1-201ENST00000353546 NOP58Q9Y2X3 529 aaKnown RBP23.42■■□□□ 1.34
ARFGAP1-201ENST00000353546 RAD54L2Q9Y4B4 1467 aa23.39■■□□□ 1.34
ARFGAP1-201ENST00000353546 PPP1R15AO75807 674 aaPredicted RBP23.39■■□□□ 1.33
ARFGAP1-201ENST00000353546 PCF11O94913 1555 aaKnown RBP23.38■■□□□ 1.33
ARFGAP1-201ENST00000353546 FHOD3Q2V2M9 1422 aa23.37■■□□□ 1.33
ARFGAP1-201ENST00000353546 TIMELESSQ9UNS1 1208 aa23.36■■□□□ 1.33
ARFGAP1-201ENST00000353546 CFAP43Q8NDM7 1665 aa23.36■■□□□ 1.33
ARFGAP1-201ENST00000353546 NESP48681 1621 aa23.3■■□□□ 1.32
ARFGAP1-201ENST00000353546 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
ARFGAP1-201ENST00000353546 ANP32CO43423 234 aa23.26■■□□□ 1.31
ARFGAP1-201ENST00000353546 RTL5Q5HYW3 569 aaPredicted RBP23.25■■□□□ 1.31
ARFGAP1-201ENST00000353546 FYCO1Q9BQS8 1478 aa23.25■■□□□ 1.31
ARFGAP1-201ENST00000353546 CCER2I3L3R5 266 aa23.24■■□□□ 1.31
ARFGAP1-201ENST00000353546 CASKIN1Q8WXD9 1431 aa23.23■■□□□ 1.31
ARFGAP1-201ENST00000353546 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
ARFGAP1-201ENST00000353546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.22■■□□□ 1.311e-7■■□□□ 12
ARFGAP1-201ENST00000353546 TONSLQ96HA7 1378 aa23.19■■□□□ 1.3
ARFGAP1-201ENST00000353546 EFCAB5A4FU69 1503 aa23.18■■□□□ 1.3
ARFGAP1-201ENST00000353546 ARID3CA6NKF2 412 aa23.17■■□□□ 1.3
ARFGAP1-201ENST00000353546 FGD6Q6ZV73 1430 aa23.17■■□□□ 1.3
ARFGAP1-201ENST00000353546 PPP4R2Q9NY27 417 aa23.17■■□□□ 1.3
ARFGAP1-201ENST00000353546 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.35e-7■■■■□ 23.1
ARFGAP1-201ENST00000353546 TDRD9Q8NDG6 1382 aaKnown RBP23.16■■□□□ 1.3
ARFGAP1-201ENST00000353546 POLA1P09884 1462 aaPredicted RBP23.14■■□□□ 1.3
ARFGAP1-201ENST00000353546 CCDC18Q5T9S5 1454 aa23.14■■□□□ 1.29
ARFGAP1-201ENST00000353546 B4GALNT3Q6L9W6 998 aa23.14■■□□□ 1.29
ARFGAP1-201ENST00000353546 ABCA10Q8WWZ4 1543 aa23.13■■□□□ 1.29
ARFGAP1-201ENST00000353546 EIF5BO60841 1220 aaKnown RBP23.13■■□□□ 1.29
ARFGAP1-201ENST00000353546 MTUS2Q5JR59 1369 aa23.11■■□□□ 1.29
ARFGAP1-201ENST00000353546 PTPRKQ15262 1439 aa23.11■■□□□ 1.29
ARFGAP1-201ENST00000353546 FMN1Q68DA7 1419 aa23.11■■□□□ 1.29
ARFGAP1-201ENST00000353546 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
ARFGAP1-201ENST00000353546 DNMBPQ6XZF7 1577 aa23.09■■□□□ 1.29
ARFGAP1-201ENST00000353546 HNRNPUQ00839 825 aaKnown RBP eCLIP23.09■■□□□ 1.29
ARFGAP1-201ENST00000353546 PKNOX2Q96KN3 472 aa23.09■■□□□ 1.29
ARFGAP1-201ENST00000353546 UACAQ9BZF9 1416 aa23.09■■□□□ 1.29
ARFGAP1-201ENST00000353546 HFM1A2PYH4 1435 aa23.08■■□□□ 1.29
ARFGAP1-201ENST00000353546 CHIC2Q9UKJ5 165 aa23.07■■□□□ 1.28
ARFGAP1-201ENST00000353546 CTTNBP2Q8WZ74 1663 aa23.06■■□□□ 1.28
ARFGAP1-201ENST00000353546 IPO9Q96P70 1041 aaKnown RBP23.06■■□□□ 1.28
ARFGAP1-201ENST00000353546 SNAPC4Q5SXM2 1469 aa23.06■■□□□ 1.28
ARFGAP1-201ENST00000353546 CUL7Q14999 1698 aa23.04■■□□□ 1.28
ARFGAP1-201ENST00000353546 WASHC2AQ641Q2 1341 aa23.04■■□□□ 1.28
ARFGAP1-201ENST00000353546 PTPN23Q9H3S7 1636 aa23.04■■□□□ 1.28
ARFGAP1-201ENST00000353546 RRP7BPQ9NSQ0 103 aa23.01■■□□□ 1.27
ARFGAP1-201ENST00000353546 ZBTB47Q9UFB7 747 aaPredicted RBP23.01■■□□□ 1.27
ARFGAP1-201ENST00000353546 NAIPQ13075 1403 aa23.01■■□□□ 1.27
ARFGAP1-201ENST00000353546 NCOA2Q15596 1464 aa22.99■■□□□ 1.27
ARFGAP1-201ENST00000353546 ANP32AP39687 249 aaKnown RBP22.98■■□□□ 1.27
ARFGAP1-201ENST00000353546 MYOM3Q5VTT5 1437 aa22.98■■□□□ 1.27
ARFGAP1-201ENST00000353546 C11orf95C9JLR9 678 aaPredicted RBP22.97■■□□□ 1.27
ARFGAP1-201ENST00000353546 BRPF3Q9ULD4 1205 aa22.95■■□□□ 1.27
ARFGAP1-201ENST00000353546 URB2Q14146 1524 aaKnown RBP22.94■■□□□ 1.26
ARFGAP1-201ENST00000353546 LRRIQ1Q96JM4 1722 aa22.94■■□□□ 1.26
ARFGAP1-201ENST00000353546 KDM5BQ9UGL1 1544 aa22.93■■□□□ 1.26
ARFGAP1-201ENST00000353546 WASHC2CQ9Y4E1 1318 aa22.92■■□□□ 1.26
ARFGAP1-201ENST00000353546 GRIN2BQ13224 1484 aa22.91■■□□□ 1.26
ARFGAP1-201ENST00000353546 LAMC3Q9Y6N6 1575 aa22.91■■□□□ 1.26
ARFGAP1-201ENST00000353546 SAMD9Q5K651 1589 aa22.9■■□□□ 1.26
ARFGAP1-201ENST00000353546 FOXD1Q16676 465 aa22.89■■□□□ 1.26
ARFGAP1-201ENST00000353546 HSPA5P11021 654 aaKnown RBP22.89■■□□□ 1.25
ARFGAP1-201ENST00000353546 SUPT6HQ7KZ85 1726 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms