RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 FANCD2Q9BXW9 1451 aa17.59■□□□□ 0.41
DDX4-201ENST00000353507 PCF11O94913 1555 aaKnown RBP17.57■□□□□ 0.4
DDX4-201ENST00000353507 DNMBPQ6XZF7 1577 aa17.55■□□□□ 0.4
DDX4-201ENST00000353507 SETD5Q9C0A6 1442 aa17.54■□□□□ 0.4
DDX4-201ENST00000353507 MAPKBP1O60336 1514 aa17.54■□□□□ 0.4
DDX4-201ENST00000353507 PHLDB1Q86UU1 1377 aa17.54■□□□□ 0.4
DDX4-201ENST00000353507 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
DDX4-201ENST00000353507 P3H3Q8IVL6 736 aa17.52■□□□□ 0.4
DDX4-201ENST00000353507 ATP1B4Q9UN42 357 aaPredicted RBP17.52■□□□□ 0.4
DDX4-201ENST00000353507 ABCA10Q8WWZ4 1543 aa17.5■□□□□ 0.39
DDX4-201ENST00000353507 EFCAB5A4FU69 1503 aa17.5■□□□□ 0.39
DDX4-201ENST00000353507 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
DDX4-201ENST00000353507 FHOD3Q2V2M9 1422 aa17.49■□□□□ 0.39
DDX4-201ENST00000353507 CUL7Q14999 1698 aa17.49■□□□□ 0.39
DDX4-201ENST00000353507 FYCO1Q9BQS8 1478 aa17.48■□□□□ 0.39
DDX4-201ENST00000353507 TOPBP1Q92547 1522 aa17.48■□□□□ 0.39
DDX4-201ENST00000353507 CTTNBP2Q8WZ74 1663 aa17.48■□□□□ 0.39
DDX4-201ENST00000353507 POLA1P09884 1462 aaPredicted RBP17.48■□□□□ 0.39
DDX4-201ENST00000353507 CASKIN1Q8WXD9 1431 aa17.43■□□□□ 0.38
DDX4-201ENST00000353507 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDX4-201ENST00000353507 NESP48681 1621 aa17.4■□□□□ 0.38
DDX4-201ENST00000353507 WDR97A6NE52 1622 aa17.39■□□□□ 0.37
DDX4-201ENST00000353507 FMN1Q68DA7 1419 aa17.39■□□□□ 0.37
DDX4-201ENST00000353507 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
DDX4-201ENST00000353507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.37■□□□□ 0.37
DDX4-201ENST00000353507 TIMELESSQ9UNS1 1208 aa17.34■□□□□ 0.37
DDX4-201ENST00000353507 LAMC3Q9Y6N6 1575 aa17.33■□□□□ 0.36
DDX4-201ENST00000353507 FGD6Q6ZV73 1430 aa17.33■□□□□ 0.36
DDX4-201ENST00000353507 SNAPC4Q5SXM2 1469 aa17.32■□□□□ 0.36
DDX4-201ENST00000353507 MTUS2Q5JR59 1369 aa17.32■□□□□ 0.36
DDX4-201ENST00000353507 SUPT16HQ9Y5B9 1047 aaKnown RBP17.32■□□□□ 0.36
DDX4-201ENST00000353507 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
DDX4-201ENST00000353507 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
DDX4-201ENST00000353507 SAMD9Q5K651 1589 aa17.29■□□□□ 0.36
DDX4-201ENST00000353507 DDX10Q13206 875 aaKnown RBP17.28■□□□□ 0.36
DDX4-201ENST00000353507 CCDC18Q5T9S5 1454 aa17.27■□□□□ 0.36
DDX4-201ENST00000353507 MYT1Q01538 1121 aa17.27■□□□□ 0.36
DDX4-201ENST00000353507 TDRD9Q8NDG6 1382 aaKnown RBP17.26■□□□□ 0.35
DDX4-201ENST00000353507 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
DDX4-201ENST00000353507 LRRIQ1Q96JM4 1722 aa17.26■□□□□ 0.35
DDX4-201ENST00000353507 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
DDX4-201ENST00000353507 THOC2Q8NI27 1593 aaKnown RBP17.24■□□□□ 0.35
DDX4-201ENST00000353507 SUPT6HQ7KZ85 1726 aaKnown RBP17.24■□□□□ 0.35
DDX4-201ENST00000353507 TONSLQ96HA7 1378 aa17.24■□□□□ 0.35
DDX4-201ENST00000353507 PPP1R15AO75807 674 aaPredicted RBP17.23■□□□□ 0.35
DDX4-201ENST00000353507 PTPN23Q9H3S7 1636 aa17.23■□□□□ 0.35
DDX4-201ENST00000353507 HFM1A2PYH4 1435 aa17.22■□□□□ 0.35
DDX4-201ENST00000353507 NCOA2Q15596 1464 aa17.22■□□□□ 0.35
DDX4-201ENST00000353507 KIF21AQ7Z4S6 1674 aa17.22■□□□□ 0.35
DDX4-201ENST00000353507 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
DDX4-201ENST00000353507 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
DDX4-201ENST00000353507 MYOM3Q5VTT5 1437 aa17.21■□□□□ 0.35
DDX4-201ENST00000353507 UACAQ9BZF9 1416 aa17.21■□□□□ 0.35
DDX4-201ENST00000353507 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.35
DDX4-201ENST00000353507 PTPRKQ15262 1439 aa17.18■□□□□ 0.34
DDX4-201ENST00000353507 HIRIP3Q9BW71 556 aaPredicted RBP17.18■□□□□ 0.34
DDX4-201ENST00000353507 NAIPQ13075 1403 aa17.16■□□□□ 0.34
DDX4-201ENST00000353507 ANP32CO43423 234 aa17.15■□□□□ 0.34
DDX4-201ENST00000353507 UGGT2Q9NYU1 1516 aa17.14■□□□□ 0.33
DDX4-201ENST00000353507 HECW1Q76N89 1606 aa17.12■□□□□ 0.33
DDX4-201ENST00000353507 CCER2I3L3R5 266 aa17.11■□□□□ 0.33
DDX4-201ENST00000353507 TARBP1Q13395 1621 aaKnown RBP17.11■□□□□ 0.33
DDX4-201ENST00000353507 PBRM1Q86U86 1689 aa17.11■□□□□ 0.33
DDX4-201ENST00000353507 ARHGEF11O15085 1522 aa17.09■□□□□ 0.33
DDX4-201ENST00000353507 MAGI3Q5TCQ9 1506 aa17.09■□□□□ 0.33
DDX4-201ENST00000353507 GCC2Q8IWJ2 1684 aa17.08■□□□□ 0.32
DDX4-201ENST00000353507 IQGAP2Q13576 1575 aa17.07■□□□□ 0.32
DDX4-201ENST00000353507 TCOF1Q13428 1488 aaKnown RBP17.05■□□□□ 0.32
DDX4-201ENST00000353507 RRP7BPQ9NSQ0 103 aa17.05■□□□□ 0.32
DDX4-201ENST00000353507 NEFLP07196 543 aa17.04■□□□□ 0.32
DDX4-201ENST00000353507 FKBP8Q14318 412 aa17.04■□□□□ 0.32
DDX4-201ENST00000353507 BCANQ96GW7 911 aa17.04■□□□□ 0.32
DDX4-201ENST00000353507 CHIC2Q9UKJ5 165 aa17.03■□□□□ 0.32
DDX4-201ENST00000353507 ADAMTS12P58397 1594 aa17.03■□□□□ 0.32
DDX4-201ENST00000353507 EPRSP07814 1512 aaKnown RBP17.03■□□□□ 0.32
DDX4-201ENST00000353507 TRIM52Q96A61 297 aa17.02■□□□□ 0.32
DDX4-201ENST00000353507 TSHZ2Q9NRE2 1034 aa17.02■□□□□ 0.31
DDX4-201ENST00000353507 AKNAQ7Z591 1439 aa17.01■□□□□ 0.31
DDX4-201ENST00000353507 KDM5BQ9UGL1 1544 aa17.01■□□□□ 0.31
DDX4-201ENST00000353507 CDK13Q14004 1512 aaKnown RBP17■□□□□ 0.31
DDX4-201ENST00000353507 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
DDX4-201ENST00000353507 WDR62O43379 1518 aa16.99■□□□□ 0.31
DDX4-201ENST00000353507 MIA2Q96PC5 1412 aa16.99■□□□□ 0.31
DDX4-201ENST00000353507 KDM6BO15054 1643 aa16.96■□□□□ 0.31
DDX4-201ENST00000353507 ARID3CA6NKF2 412 aa16.95■□□□□ 0.3
DDX4-201ENST00000353507 MRC2Q9UBG0 1479 aa16.94■□□□□ 0.3
DDX4-201ENST00000353507 DENND4BO75064 1496 aaPredicted RBP16.93■□□□□ 0.3
DDX4-201ENST00000353507 HSPA5P11021 654 aaKnown RBP16.92■□□□□ 0.3
DDX4-201ENST00000353507 MPHOSPH9Q99550 1183 aa16.91■□□□□ 0.3
DDX4-201ENST00000353507 EIF4G2P78344 907 aaKnown RBP eCLIP16.9■□□□□ 0.3
DDX4-201ENST00000353507 WASHC2AQ641Q2 1341 aa16.88■□□□□ 0.29
DDX4-201ENST00000353507 KIAA0556O60303 1618 aa16.88■□□□□ 0.29
DDX4-201ENST00000353507 DAPK1P53355 1430 aa16.88■□□□□ 0.29
DDX4-201ENST00000353507 DNMT1P26358 1616 aaKnown RBP16.87■□□□□ 0.29
DDX4-201ENST00000353507 HNRNPUQ00839 825 aaKnown RBP eCLIP16.87■□□□□ 0.29
DDX4-201ENST00000353507 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
DDX4-201ENST00000353507 ROCK1Q13464 1354 aa16.85■□□□□ 0.29
DDX4-201ENST00000353507 FOXD1Q16676 465 aa16.85■□□□□ 0.29
DDX4-201ENST00000353507 L3MBTL2Q969R5 705 aa16.85■□□□□ 0.29
DDX4-201ENST00000353507 KIAA0586Q9BVV6 1533 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms