RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 RIMBP3CA6NJZ7 1639 aa23.04■■□□□ 1.28
SEC13-202ENST00000350697 RIMBP3BA6NNM3 1639 aa23.04■■□□□ 1.28
SEC13-202ENST00000350697 SHROOM2Q13796 1616 aa23.04■■□□□ 1.28
SEC13-202ENST00000350697 RIMBP3Q9UFD9 1639 aa23.04■■□□□ 1.28
SEC13-202ENST00000350697 KIF21BO75037 1637 aa23.02■■□□□ 1.28
SEC13-202ENST00000350697 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
SEC13-202ENST00000350697 IQGAP2Q13576 1575 aa22.99■■□□□ 1.27
SEC13-202ENST00000350697 CTTNBP2Q8WZ74 1663 aa22.97■■□□□ 1.27
SEC13-202ENST00000350697 PRG4Q92954 1404 aaPredicted RBP22.95■■□□□ 1.26
SEC13-202ENST00000350697 ERCC6L2Q5T890 1561 aa22.92■■□□□ 1.26
SEC13-202ENST00000350697 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
SEC13-202ENST00000350697 ARAP1Q96P48 1450 aa22.89■■□□□ 1.26
SEC13-202ENST00000350697 UGGT2Q9NYU1 1516 aa22.87■■□□□ 1.25
SEC13-202ENST00000350697 CARMIL2Q6F5E8 1435 aa22.85■■□□□ 1.25
SEC13-202ENST00000350697 CYB5RLQ6IPT4 315 aa22.84■■□□□ 1.25
SEC13-202ENST00000350697 EHMT2Q96KQ7 1210 aa22.83■■□□□ 1.25
SEC13-202ENST00000350697 UBTFP17480 764 aaKnown RBP22.82■■□□□ 1.24
SEC13-202ENST00000350697 DISP1Q96F81 1524 aa22.8■■□□□ 1.24
SEC13-202ENST00000350697 KIAA0556O60303 1618 aa22.76■■□□□ 1.23
SEC13-202ENST00000350697 TNIKQ9UKE5 1360 aa22.75■■□□□ 1.23
SEC13-202ENST00000350697 PTPRGP23470 1445 aa22.71■■□□□ 1.23
SEC13-202ENST00000350697 SAMD9Q5K651 1589 aa22.69■■□□□ 1.22
SEC13-202ENST00000350697 RANGAP1P46060 587 aaPredicted RBP22.67■■□□□ 1.22
SEC13-202ENST00000350697 TTBK1Q5TCY1 1321 aaPredicted RBP22.66■■□□□ 1.22
SEC13-202ENST00000350697 EFCAB5A4FU69 1503 aa22.64■■□□□ 1.22
SEC13-202ENST00000350697 P3H3Q8IVL6 736 aa22.63■■□□□ 1.21
SEC13-202ENST00000350697 LOC105371045A0A1W2PR82 267 aa22.57■■□□□ 1.2
SEC13-202ENST00000350697 FHOD3Q2V2M9 1422 aa22.56■■□□□ 1.2
SEC13-202ENST00000350697 UACAQ9BZF9 1416 aa22.56■■□□□ 1.2
SEC13-202ENST00000350697 ADCY10Q96PN6 1610 aa22.56■■□□□ 1.2
SEC13-202ENST00000350697 ARHGAP35Q9NRY4 1499 aa22.55■■□□□ 1.2
SEC13-202ENST00000350697 UHRF1BP1LA0JNW5 1464 aa22.54■■□□□ 1.2
SEC13-202ENST00000350697 ABCC2Q92887 1545 aa22.52■■□□□ 1.2
SEC13-202ENST00000350697 PLB1Q6P1J6 1458 aa22.51■■□□□ 1.19
SEC13-202ENST00000350697 ABCA8O94911 1581 aa22.5■■□□□ 1.19
SEC13-202ENST00000350697 CLIP1P30622 1438 aa22.5■■□□□ 1.19
SEC13-202ENST00000350697 NPM1P06748 294 aaKnown RBP eCLIP22.49■■□□□ 1.19
SEC13-202ENST00000350697 CEP162Q5TB80 1403 aa22.45■■□□□ 1.18
SEC13-202ENST00000350697 FMN1Q68DA7 1419 aa22.43■■□□□ 1.18
SEC13-202ENST00000350697 RAPGEF6Q8TEU7 1601 aa22.43■■□□□ 1.18
SEC13-202ENST00000350697 KDM5BQ9UGL1 1544 aa22.43■■□□□ 1.18
SEC13-202ENST00000350697 MAPKBP1O60336 1514 aa22.39■■□□□ 1.17
SEC13-202ENST00000350697 ZCCHC11Q5TAX3 1644 aaKnown RBP22.37■■□□□ 1.17
SEC13-202ENST00000350697 NUP153P49790 1475 aaKnown RBP22.34■■□□□ 1.17
SEC13-202ENST00000350697 TRHP20396 242 aaPredicted RBP22.33■■□□□ 1.17
SEC13-202ENST00000350697 ATP10BO94823 1461 aa22.31■■□□□ 1.16
SEC13-202ENST00000350697 ASXL2Q76L83 1435 aa22.3■■□□□ 1.16
SEC13-202ENST00000350697 ARID3CA6NKF2 412 aa22.3■■□□□ 1.16
SEC13-202ENST00000350697 HECW1Q76N89 1606 aa22.3■■□□□ 1.16
SEC13-202ENST00000350697 CASKIN1Q8WXD9 1431 aa22.28■■□□□ 1.16
SEC13-202ENST00000350697 ATP1B4Q9UN42 357 aaPredicted RBP22.27■■□□□ 1.16
SEC13-202ENST00000350697 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
SEC13-202ENST00000350697 PCF11O94913 1555 aaKnown RBP22.26■■□□□ 1.15
SEC13-202ENST00000350697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.25■■□□□ 1.15
SEC13-202ENST00000350697 HNRNPUL2Q1KMD3 747 aaKnown RBP22.25■■□□□ 1.15
SEC13-202ENST00000350697 FYCO1Q9BQS8 1478 aa22.24■■□□□ 1.15
SEC13-202ENST00000350697 WDR7Q9Y4E6 1490 aa22.24■■□□□ 1.15
SEC13-202ENST00000350697 EPRSP07814 1512 aaKnown RBP22.23■■□□□ 1.15
SEC13-202ENST00000350697 DIP2BQ9P265 1576 aa22.22■■□□□ 1.15
SEC13-202ENST00000350697 KIF13AQ9H1H9 1805 aa22.21■■□□□ 1.15
SEC13-202ENST00000350697 CDK13Q14004 1512 aaKnown RBP22.2■■□□□ 1.14
SEC13-202ENST00000350697 FAM69CQ0P6D2 419 aa22.2■■□□□ 1.14
SEC13-202ENST00000350697 CCDC18Q5T9S5 1454 aa22.17■■□□□ 1.14
SEC13-202ENST00000350697 LRRIQ1Q96JM4 1722 aa22.17■■□□□ 1.14
SEC13-202ENST00000350697 VPS8Q8N3P4 1428 aa22.17■■□□□ 1.14
SEC13-202ENST00000350697 PLEKHD1A6NEE1 506 aa22.16■■□□□ 1.14
SEC13-202ENST00000350697 GLI2P10070 1586 aa22.16■■□□□ 1.14
SEC13-202ENST00000350697 KCNH8Q96L42 1107 aa22.14■■□□□ 1.13
SEC13-202ENST00000350697 CDK11AQ9UQ88 783 aaPredicted RBP22.14■■□□□ 1.13
SEC13-202ENST00000350697 MAP3K4Q9Y6R4 1608 aa22.05■■□□□ 1.12
SEC13-202ENST00000350697 TROQ12816 1431 aaPredicted RBP22.05■■□□□ 1.12
SEC13-202ENST00000350697 CFAP43Q8NDM7 1665 aa22.04■■□□□ 1.12
SEC13-202ENST00000350697 ABCA9Q8IUA7 1624 aa22.03■■□□□ 1.12
SEC13-202ENST00000350697 TSPOAP1O95153 1857 aa22.02■■□□□ 1.12
SEC13-202ENST00000350697 CD109Q6YHK3 1445 aa22.01■■□□□ 1.11
SEC13-202ENST00000350697 MAGI3Q5TCQ9 1506 aa22■■□□□ 1.11
SEC13-202ENST00000350697 KIF14Q15058 1648 aa21.98■■□□□ 1.11
SEC13-202ENST00000350697 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.98■■□□□ 1.114e-7■■■■□ 22.2
SEC13-202ENST00000350697 PPRC1Q5VV67 1664 aaKnown RBP21.97■■□□□ 1.11
SEC13-202ENST00000350697 TIAM1Q13009 1591 aa21.97■■□□□ 1.11
SEC13-202ENST00000350697 MTUS2Q5JR59 1369 aa21.96■■□□□ 1.11
SEC13-202ENST00000350697 MAP3K1Q13233 1512 aa21.96■■□□□ 1.11
SEC13-202ENST00000350697 TEX14Q8IWB6 1497 aa21.95■■□□□ 1.1
SEC13-202ENST00000350697 TTC37Q6PGP7 1564 aa21.95■■□□□ 1.1
SEC13-202ENST00000350697 APLP2Q06481 763 aa21.93■■□□□ 1.1
SEC13-202ENST00000350697 EHBP1L1Q8N3D4 1523 aa21.93■■□□□ 1.1
SEC13-202ENST00000350697 LRRC9Q6ZRR7 1453 aa21.87■■□□□ 1.09
SEC13-202ENST00000350697 MYO5CQ9NQX4 1742 aa21.86■■□□□ 1.09
SEC13-202ENST00000350697 PLCH2O75038 1416 aa21.86■■□□□ 1.09
SEC13-202ENST00000350697 ARAP3Q8WWN8 1544 aa21.84■■□□□ 1.09
SEC13-202ENST00000350697 NEO1Q92859 1461 aa21.83■■□□□ 1.09
SEC13-202ENST00000350697 KANK4Q5T7N3 995 aaPredicted RBP21.83■■□□□ 1.09
SEC13-202ENST00000350697 SUPT6HQ7KZ85 1726 aaKnown RBP21.82■■□□□ 1.08
SEC13-202ENST00000350697 PHLDB1Q86UU1 1377 aa21.82■■□□□ 1.08
SEC13-202ENST00000350697 FANCAO15360 1455 aa21.82■■□□□ 1.08
SEC13-202ENST00000350697 KDM6BO15054 1643 aa21.81■■□□□ 1.08
SEC13-202ENST00000350697 CFAP74Q9C0B2 1584 aa21.81■■□□□ 1.08
SEC13-202ENST00000350697 PREX2Q70Z35 1606 aa21.8■■□□□ 1.08
SEC13-202ENST00000350697 CCNB3Q8WWL7 1395 aa21.8■■□□□ 1.08
SEC13-202ENST00000350697 CDC42BPAQ5VT25 1732 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms