RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.9■■□□□ 1.9
RNF38-202ENST00000350199 KANK4Q5T7N3 995 aaPredicted RBP26.89■■□□□ 1.9
RNF38-202ENST00000350199 CFDP1Q9UEE9 299 aaPredicted RBP26.85■■□□□ 1.89
RNF38-202ENST00000350199 KCNH8Q96L42 1107 aa26.85■■□□□ 1.89
RNF38-202ENST00000350199 FANCD2Q9BXW9 1451 aa26.85■■□□□ 1.89
RNF38-202ENST00000350199 BCANQ96GW7 911 aa26.78■■□□□ 1.88
RNF38-202ENST00000350199 HIRIP3Q9BW71 556 aaPredicted RBP26.74■■□□□ 1.87
RNF38-202ENST00000350199 CHGAP10645 457 aaKnown RBP26.72■■□□□ 1.87
RNF38-202ENST00000350199 MIER1Q8N108 512 aa26.72■■□□□ 1.87
RNF38-202ENST00000350199 CLSPNQ9HAW4 1339 aa26.7■■□□□ 1.87
RNF38-202ENST00000350199 KDM2AQ9Y2K7 1162 aa26.69■■□□□ 1.86
RNF38-202ENST00000350199 FMN1Q68DA7 1419 aa26.68■■□□□ 1.86
RNF38-202ENST00000350199 ARHGAP35Q9NRY4 1499 aa26.66■■□□□ 1.86
RNF38-202ENST00000350199 SIN3AQ96ST3 1273 aa26.65■■□□□ 1.86
RNF38-202ENST00000350199 FHOD3Q2V2M9 1422 aa26.63■■□□□ 1.85
RNF38-202ENST00000350199 FGD5Q6ZNL6 1462 aa26.63■■□□□ 1.85
RNF38-202ENST00000350199 BICRAQ9NZM4 1560 aa26.61■■□□□ 1.85
RNF38-202ENST00000350199 EIF4G2P78344 907 aaKnown RBP eCLIP26.6■■□□□ 1.85
RNF38-202ENST00000350199 ESF1Q9H501 851 aaKnown RBP26.58■■□□□ 1.85
RNF38-202ENST00000350199 IGF1RP08069 1367 aa26.57■■□□□ 1.84
RNF38-202ENST00000350199 SETD5Q9C0A6 1442 aa26.55■■□□□ 1.84
RNF38-202ENST00000350199 CARMIL2Q6F5E8 1435 aa26.54■■□□□ 1.84
RNF38-202ENST00000350199 CFTRP13569 1480 aa26.54■■□□□ 1.84
RNF38-202ENST00000350199 HNRNPUQ00839 825 aaKnown RBP eCLIP26.53■■□□□ 1.84
RNF38-202ENST00000350199 STAG3Q9UJ98 1225 aa26.52■■□□□ 1.84
RNF38-202ENST00000350199 SYNJ1O43426 1573 aa26.52■■□□□ 1.84
RNF38-202ENST00000350199 RAD54L2Q9Y4B4 1467 aa26.51■■□□□ 1.83
RNF38-202ENST00000350199 FAM9BQ8IZU0 186 aa26.51■■□□□ 1.83
RNF38-202ENST00000350199 DAXXQ9UER7 740 aaPredicted RBP26.51■■□□□ 1.83
RNF38-202ENST00000350199 HMGXB3Q12766 1538 aa26.5■■□□□ 1.83
RNF38-202ENST00000350199 RGL3Q3MIN7 710 aa26.44■■□□□ 1.82
RNF38-202ENST00000350199 RAB3GAP2Q9H2M9 1393 aa26.43■■□□□ 1.82
RNF38-202ENST00000350199 GAPVD1Q14C86 1478 aa26.4■■□□□ 1.82
RNF38-202ENST00000350199 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.82
RNF38-202ENST00000350199 MRS2Q9HD23 443 aa26.38■■□□□ 1.81
RNF38-202ENST00000350199 TMC1Q8TDI8 760 aa26.37■■□□□ 1.81
RNF38-202ENST00000350199 TIMELESSQ9UNS1 1208 aa26.36■■□□□ 1.81
RNF38-202ENST00000350199 FKBP8Q14318 412 aa26.35■■□□□ 1.81
RNF38-202ENST00000350199 JPH4Q96JJ6 628 aa26.33■■□□□ 1.81
RNF38-202ENST00000350199 KIF21BO75037 1637 aa26.33■■□□□ 1.8
RNF38-202ENST00000350199 NESP48681 1621 aa26.31■■□□□ 1.8
RNF38-202ENST00000350199 TOP2BQ02880 1626 aa26.3■■□□□ 1.8
RNF38-202ENST00000350199 PLPPR3Q6T4P5 718 aa26.29■■□□□ 1.8
RNF38-202ENST00000350199 NEFMP07197 916 aa26.27■■□□□ 1.8
RNF38-202ENST00000350199 CUX1P39880 1505 aa26.27■■□□□ 1.8
RNF38-202ENST00000350199 CARD11Q9BXL7 1154 aa26.26■■□□□ 1.79
RNF38-202ENST00000350199 CANXP27824 592 aaKnown RBP26.25■■□□□ 1.79
RNF38-202ENST00000350199 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
RNF38-202ENST00000350199 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
RNF38-202ENST00000350199 SALL2Q9Y467 1007 aaPredicted RBP26.24■■□□□ 1.79
RNF38-202ENST00000350199 SCAF1Q9H7N4 1312 aaKnown RBP26.22■■□□□ 1.79
RNF38-202ENST00000350199 CCDC18Q5T9S5 1454 aa26.22■■□□□ 1.79
RNF38-202ENST00000350199 FOXD1Q16676 465 aa26.2■■□□□ 1.78
RNF38-202ENST00000350199 AQRO60306 1485 aaKnown RBP eCLIP26.19■■□□□ 1.78
RNF38-202ENST00000350199 MYT1Q01538 1121 aa26.19■■□□□ 1.78
RNF38-202ENST00000350199 MPHOSPH9Q99550 1183 aa26.17■■□□□ 1.78
RNF38-202ENST00000350199 PRXQ9BXM0 1461 aa26.17■■□□□ 1.78
RNF38-202ENST00000350199 PEG3Q9GZU2 1588 aa26.17■■□□□ 1.78
RNF38-202ENST00000350199 PKD2Q13563 968 aa26.15■■□□□ 1.78
RNF38-202ENST00000350199 SENP3Q9H4L4 574 aaPredicted RBP26.13■■□□□ 1.77
RNF38-202ENST00000350199 TOPBP1Q92547 1522 aa26.13■■□□□ 1.77
RNF38-202ENST00000350199 DHX57Q6P158 1386 aaKnown RBP26.12■■□□□ 1.77
RNF38-202ENST00000350199 ANKRD30AQ9BXX3 1397 aa26.12■■□□□ 1.77
RNF38-202ENST00000350199 DCAF11Q8TEB1 546 aa26.11■■□□□ 1.77
RNF38-202ENST00000350199 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
RNF38-202ENST00000350199 WDR43Q15061 677 aaKnown RBP eCLIP26.1■■□□□ 1.77
RNF38-202ENST00000350199 POLA1P09884 1462 aaPredicted RBP26.09■■□□□ 1.77
RNF38-202ENST00000350199 EFCAB2Q5VUJ9 269 aa26.08■■□□□ 1.77
RNF38-202ENST00000350199 HNRNPMP52272 730 aaKnown RBP eCLIP26.05■■□□□ 1.76
RNF38-202ENST00000350199 NUP155O75694 1391 aa26.05■■□□□ 1.76
RNF38-202ENST00000350199 PPP1R15AO75807 674 aaPredicted RBP26.03■■□□□ 1.76
RNF38-202ENST00000350199 HSPA5P11021 654 aaKnown RBP26.02■■□□□ 1.76
RNF38-202ENST00000350199 GRIN2BQ13224 1484 aa26.02■■□□□ 1.76
RNF38-202ENST00000350199 PTPRGP23470 1445 aa26.01■■□□□ 1.76
RNF38-202ENST00000350199 SLC24A1O60721 1099 aa26.01■■□□□ 1.75
RNF38-202ENST00000350199 CDCA8Q53HL2 280 aa26.01■■□□□ 1.75
RNF38-202ENST00000350199 KANK1Q14678 1352 aa26.01■■□□□ 1.75
RNF38-202ENST00000350199 LRRC9Q6ZRR7 1453 aa26■■□□□ 1.75
RNF38-202ENST00000350199 MRC2Q9UBG0 1479 aa25.99■■□□□ 1.75
RNF38-202ENST00000350199 DNMBPQ6XZF7 1577 aa25.98■■□□□ 1.75
RNF38-202ENST00000350199 PHLDB1Q86UU1 1377 aa25.98■■□□□ 1.75
RNF38-202ENST00000350199 CASKIN1Q8WXD9 1431 aa25.98■■□□□ 1.75
RNF38-202ENST00000350199 KNSTRNQ9Y448 316 aa25.95■■□□□ 1.74
RNF38-202ENST00000350199 ARID4BQ4LE39 1312 aaPredicted RBP25.94■■□□□ 1.74
RNF38-202ENST00000350199 IRX6P78412 446 aaPredicted RBP25.94■■□□□ 1.74
RNF38-202ENST00000350199 RSPH4AQ5TD94 716 aa25.94■■□□□ 1.74
RNF38-202ENST00000350199 ZBTB47Q9UFB7 747 aaPredicted RBP25.94■■□□□ 1.74
RNF38-202ENST00000350199 FGD6Q6ZV73 1430 aa25.92■■□□□ 1.74
RNF38-202ENST00000350199 RTL5Q5HYW3 569 aaPredicted RBP25.92■■□□□ 1.74
RNF38-202ENST00000350199 L3MBTL2Q969R5 705 aa25.92■■□□□ 1.74
RNF38-202ENST00000350199 DNAJC5BQ9UF47 199 aa25.91■■□□□ 1.74
RNF38-202ENST00000350199 MYOM3Q5VTT5 1437 aa25.89■■□□□ 1.74
RNF38-202ENST00000350199 SENP3-EIF4A1A0A087X0R7 540 aa25.88■■□□□ 1.73
RNF38-202ENST00000350199 IFT140Q96RY7 1462 aa25.87■■□□□ 1.73
RNF38-202ENST00000350199 GGT6Q6P531 493 aa25.87■■□□□ 1.73
RNF38-202ENST00000350199 CCDC136Q96JN2 1154 aa25.87■■□□□ 1.73
RNF38-202ENST00000350199 FYCO1Q9BQS8 1478 aa25.86■■□□□ 1.73
RNF38-202ENST00000350199 BCL11AQ9H165 835 aa25.85■■□□□ 1.73
RNF38-202ENST00000350199 EFCAB5A4FU69 1503 aa25.83■■□□□ 1.73
RNF38-202ENST00000350199 LAMC3Q9Y6N6 1575 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms