RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 CHMP7Q8WUX9 453 aaPredicted RBP18.07■□□□□ 0.48
DNMT3B-203ENST00000348286 RAB3GAP2Q9H2M9 1393 aa18.06■□□□□ 0.48
DNMT3B-203ENST00000348286 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
DNMT3B-203ENST00000348286 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
DNMT3B-203ENST00000348286 SENP3-EIF4A1A0A087X0R7 540 aa18.05■□□□□ 0.48
DNMT3B-203ENST00000348286 EIF4G2P78344 907 aaKnown RBP eCLIP18.03■□□□□ 0.48
DNMT3B-203ENST00000348286 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
DNMT3B-203ENST00000348286 MRS2Q9HD23 443 aa18.02■□□□□ 0.48
DNMT3B-203ENST00000348286 SALL2Q9Y467 1007 aaPredicted RBP18.02■□□□□ 0.48
DNMT3B-203ENST00000348286 CADPSQ9ULU8 1353 aa18.01■□□□□ 0.47
DNMT3B-203ENST00000348286 SETD5Q9C0A6 1442 aa18.01■□□□□ 0.47
DNMT3B-203ENST00000348286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.01■□□□□ 0.47
DNMT3B-203ENST00000348286 DHX57Q6P158 1386 aaKnown RBP18■□□□□ 0.47
DNMT3B-203ENST00000348286 TSPY4P0CV99 314 aa17.96■□□□□ 0.47
DNMT3B-203ENST00000348286 TSPY10P0CW01 314 aa17.96■□□□□ 0.47
DNMT3B-203ENST00000348286 SUPT16HQ9Y5B9 1047 aaKnown RBP17.96■□□□□ 0.47
DNMT3B-203ENST00000348286 FHOD3Q2V2M9 1422 aa17.95■□□□□ 0.46
DNMT3B-203ENST00000348286 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
DNMT3B-203ENST00000348286 FOXD1Q16676 465 aa17.94■□□□□ 0.46
DNMT3B-203ENST00000348286 KCNH8Q96L42 1107 aa17.93■□□□□ 0.46
DNMT3B-203ENST00000348286 CFDP1Q9UEE9 299 aaPredicted RBP17.93■□□□□ 0.46
DNMT3B-203ENST00000348286 DAXXQ9UER7 740 aaPredicted RBP17.92■□□□□ 0.46
DNMT3B-203ENST00000348286 IGF1RP08069 1367 aa17.9■□□□□ 0.46
DNMT3B-203ENST00000348286 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
DNMT3B-203ENST00000348286 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.46
DNMT3B-203ENST00000348286 KIF21BO75037 1637 aa17.89■□□□□ 0.45
DNMT3B-203ENST00000348286 ARHGAP35Q9NRY4 1499 aa17.88■□□□□ 0.45
DNMT3B-203ENST00000348286 PLEKHD1A6NEE1 506 aa17.87■□□□□ 0.45
DNMT3B-203ENST00000348286 PPP1R15AO75807 674 aaPredicted RBP17.87■□□□□ 0.45
DNMT3B-203ENST00000348286 RGL3Q3MIN7 710 aa17.86■□□□□ 0.45
DNMT3B-203ENST00000348286 TIMELESSQ9UNS1 1208 aa17.83■□□□□ 0.44
DNMT3B-203ENST00000348286 ARAP1Q96P48 1450 aa17.8■□□□□ 0.44
DNMT3B-203ENST00000348286 NCAPD3P42695 1498 aa17.79■□□□□ 0.44
DNMT3B-203ENST00000348286 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
DNMT3B-203ENST00000348286 RTL5Q5HYW3 569 aaPredicted RBP17.78■□□□□ 0.44
DNMT3B-203ENST00000348286 CHGAP10645 457 aaKnown RBP17.77■□□□□ 0.44
DNMT3B-203ENST00000348286 FANCD2Q9BXW9 1451 aa17.77■□□□□ 0.43
DNMT3B-203ENST00000348286 FMN1Q68DA7 1419 aa17.77■□□□□ 0.43
DNMT3B-203ENST00000348286 FGD5Q6ZNL6 1462 aa17.77■□□□□ 0.43
DNMT3B-203ENST00000348286 NPM2Q86SE8 214 aaKnown RBP17.76■□□□□ 0.43
DNMT3B-203ENST00000348286 RAD54L2Q9Y4B4 1467 aa17.76■□□□□ 0.43
DNMT3B-203ENST00000348286 CCDC136Q96JN2 1154 aa17.75■□□□□ 0.43
DNMT3B-203ENST00000348286 MPHOSPH9Q99550 1183 aa17.74■□□□□ 0.43
DNMT3B-203ENST00000348286 PHLDB1Q86UU1 1377 aa17.73■□□□□ 0.43
DNMT3B-203ENST00000348286 CARD11Q9BXL7 1154 aa17.73■□□□□ 0.43
DNMT3B-203ENST00000348286 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
DNMT3B-203ENST00000348286 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
DNMT3B-203ENST00000348286 PRXQ9BXM0 1461 aa17.71■□□□□ 0.42
DNMT3B-203ENST00000348286 L3MBTL2Q969R5 705 aa17.7■□□□□ 0.42
DNMT3B-203ENST00000348286 CCER2I3L3R5 266 aa17.69■□□□□ 0.42
DNMT3B-203ENST00000348286 CFTRP13569 1480 aa17.66■□□□□ 0.42
DNMT3B-203ENST00000348286 ANP32AP39687 249 aaKnown RBP17.66■□□□□ 0.42
DNMT3B-203ENST00000348286 SENP3Q9H4L4 574 aaPredicted RBP17.66■□□□□ 0.42
DNMT3B-203ENST00000348286 PKD2Q13563 968 aa17.65■□□□□ 0.42
DNMT3B-203ENST00000348286 CUX1P39880 1505 aa17.65■□□□□ 0.42
DNMT3B-203ENST00000348286 ERCC6Q03468 1493 aa17.64■□□□□ 0.41
DNMT3B-203ENST00000348286 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.41
DNMT3B-203ENST00000348286 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
DNMT3B-203ENST00000348286 B4GALNT3Q6L9W6 998 aa17.63■□□□□ 0.41
DNMT3B-203ENST00000348286 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
DNMT3B-203ENST00000348286 LRRC9Q6ZRR7 1453 aa17.59■□□□□ 0.41
DNMT3B-203ENST00000348286 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
DNMT3B-203ENST00000348286 ERICH3Q5RHP9 1530 aa17.59■□□□□ 0.41
DNMT3B-203ENST00000348286 RRBP1Q9P2E9 1410 aaKnown RBP17.58■□□□□ 0.4
DNMT3B-203ENST00000348286 TSHZ2Q9NRE2 1034 aa17.57■□□□□ 0.4
DNMT3B-203ENST00000348286 NBR1Q14596 966 aa17.56■□□□□ 0.4
DNMT3B-203ENST00000348286 NESP48681 1621 aa17.55■□□□□ 0.4
DNMT3B-203ENST00000348286 WDR43Q15061 677 aaKnown RBP eCLIP17.55■□□□□ 0.4
DNMT3B-203ENST00000348286 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
DNMT3B-203ENST00000348286 ZNF644Q9H582 1327 aaPredicted RBP17.53■□□□□ 0.4
DNMT3B-203ENST00000348286 CCDC18Q5T9S5 1454 aa17.53■□□□□ 0.4
DNMT3B-203ENST00000348286 PPP4R2Q9NY27 417 aa17.53■□□□□ 0.4
DNMT3B-203ENST00000348286 CC2D1BQ5T0F9 858 aaKnown RBP17.52■□□□□ 0.4
DNMT3B-203ENST00000348286 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
DNMT3B-203ENST00000348286 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.39
DNMT3B-203ENST00000348286 FGD6Q6ZV73 1430 aa17.52■□□□□ 0.39
DNMT3B-203ENST00000348286 RBM19Q9Y4C8 960 aaKnown RBP17.51■□□□□ 0.39
DNMT3B-203ENST00000348286 NUP155O75694 1391 aa17.51■□□□□ 0.39
DNMT3B-203ENST00000348286 ANP32EQ9BTT0 268 aa17.5■□□□□ 0.39
DNMT3B-203ENST00000348286 HNRNPMP52272 730 aaKnown RBP eCLIP17.5■□□□□ 0.399e-7■■□□□ 12.9
DNMT3B-203ENST00000348286 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
DNMT3B-203ENST00000348286 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
DNMT3B-203ENST00000348286 ZBTB47Q9UFB7 747 aaPredicted RBP17.46■□□□□ 0.39
DNMT3B-203ENST00000348286 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.388e-7■■■■□ 22.3
DNMT3B-203ENST00000348286 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
DNMT3B-203ENST00000348286 KNSTRNQ9Y448 316 aa17.44■□□□□ 0.38
DNMT3B-203ENST00000348286 CASKIN1Q8WXD9 1431 aa17.43■□□□□ 0.38
DNMT3B-203ENST00000348286 MYOM3Q5VTT5 1437 aa17.42■□□□□ 0.38
DNMT3B-203ENST00000348286 CARMIL2Q6F5E8 1435 aa17.42■□□□□ 0.38
DNMT3B-203ENST00000348286 STAG3Q9UJ98 1225 aa17.41■□□□□ 0.38
DNMT3B-203ENST00000348286 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
DNMT3B-203ENST00000348286 ANKRD30AQ9BXX3 1397 aa17.4■□□□□ 0.38
DNMT3B-203ENST00000348286 PRKRIP1Q9H875 184 aaPredicted RBP17.4■□□□□ 0.38
DNMT3B-203ENST00000348286 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
DNMT3B-203ENST00000348286 NCOA2Q15596 1464 aa17.39■□□□□ 0.37
DNMT3B-203ENST00000348286 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
DNMT3B-203ENST00000348286 NEUROD2Q15784 382 aa17.37■□□□□ 0.37
DNMT3B-203ENST00000348286 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
DNMT3B-203ENST00000348286 ST20-MTHFSA0A0A6YYL1 179 aa17.37■□□□□ 0.37
DNMT3B-203ENST00000348286 TNNT2P45379 298 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms