RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 CHMP7Q8WUX9 453 aaPredicted RBP18.07■□□□□ 0.48
DNMT3B-203ENST00000348286 RAB3GAP2Q9H2M9 1393 aa18.06■□□□□ 0.48
DNMT3B-203ENST00000348286 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
DNMT3B-203ENST00000348286 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
DNMT3B-203ENST00000348286 SENP3-EIF4A1A0A087X0R7 540 aa18.05■□□□□ 0.48
DNMT3B-203ENST00000348286 EIF4G2P78344 907 aaKnown RBP eCLIP18.03■□□□□ 0.48
DNMT3B-203ENST00000348286 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
DNMT3B-203ENST00000348286 MRS2Q9HD23 443 aa18.02■□□□□ 0.48
DNMT3B-203ENST00000348286 SALL2Q9Y467 1007 aaPredicted RBP18.02■□□□□ 0.48
DNMT3B-203ENST00000348286 CADPSQ9ULU8 1353 aa18.01■□□□□ 0.47
DNMT3B-203ENST00000348286 SETD5Q9C0A6 1442 aa18.01■□□□□ 0.47
DNMT3B-203ENST00000348286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.01■□□□□ 0.47
DNMT3B-203ENST00000348286 DHX57Q6P158 1386 aaKnown RBP18■□□□□ 0.47
DNMT3B-203ENST00000348286 TSPY4P0CV99 314 aa17.96■□□□□ 0.47
DNMT3B-203ENST00000348286 TSPY10P0CW01 314 aa17.96■□□□□ 0.47
DNMT3B-203ENST00000348286 SUPT16HQ9Y5B9 1047 aaKnown RBP17.96■□□□□ 0.47
DNMT3B-203ENST00000348286 FHOD3Q2V2M9 1422 aa17.95■□□□□ 0.46
DNMT3B-203ENST00000348286 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
DNMT3B-203ENST00000348286 FOXD1Q16676 465 aa17.94■□□□□ 0.46
DNMT3B-203ENST00000348286 KCNH8Q96L42 1107 aa17.93■□□□□ 0.46
DNMT3B-203ENST00000348286 CFDP1Q9UEE9 299 aaPredicted RBP17.93■□□□□ 0.46
DNMT3B-203ENST00000348286 DAXXQ9UER7 740 aaPredicted RBP17.92■□□□□ 0.46
DNMT3B-203ENST00000348286 IGF1RP08069 1367 aa17.9■□□□□ 0.46
DNMT3B-203ENST00000348286 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
DNMT3B-203ENST00000348286 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.46
DNMT3B-203ENST00000348286 KIF21BO75037 1637 aa17.89■□□□□ 0.45
DNMT3B-203ENST00000348286 ARHGAP35Q9NRY4 1499 aa17.88■□□□□ 0.45
DNMT3B-203ENST00000348286 PLEKHD1A6NEE1 506 aa17.87■□□□□ 0.45
DNMT3B-203ENST00000348286 PPP1R15AO75807 674 aaPredicted RBP17.87■□□□□ 0.45
DNMT3B-203ENST00000348286 RGL3Q3MIN7 710 aa17.86■□□□□ 0.45
DNMT3B-203ENST00000348286 TIMELESSQ9UNS1 1208 aa17.83■□□□□ 0.44
DNMT3B-203ENST00000348286 ARAP1Q96P48 1450 aa17.8■□□□□ 0.44
DNMT3B-203ENST00000348286 NCAPD3P42695 1498 aa17.79■□□□□ 0.44
DNMT3B-203ENST00000348286 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
DNMT3B-203ENST00000348286 RTL5Q5HYW3 569 aaPredicted RBP17.78■□□□□ 0.44
DNMT3B-203ENST00000348286 CHGAP10645 457 aaKnown RBP17.77■□□□□ 0.44
DNMT3B-203ENST00000348286 FANCD2Q9BXW9 1451 aa17.77■□□□□ 0.43
DNMT3B-203ENST00000348286 FMN1Q68DA7 1419 aa17.77■□□□□ 0.43
DNMT3B-203ENST00000348286 FGD5Q6ZNL6 1462 aa17.77■□□□□ 0.43
DNMT3B-203ENST00000348286 NPM2Q86SE8 214 aaKnown RBP17.76■□□□□ 0.43
DNMT3B-203ENST00000348286 RAD54L2Q9Y4B4 1467 aa17.76■□□□□ 0.43
DNMT3B-203ENST00000348286 CCDC136Q96JN2 1154 aa17.75■□□□□ 0.43
DNMT3B-203ENST00000348286 MPHOSPH9Q99550 1183 aa17.74■□□□□ 0.43
DNMT3B-203ENST00000348286 PHLDB1Q86UU1 1377 aa17.73■□□□□ 0.43
DNMT3B-203ENST00000348286 CARD11Q9BXL7 1154 aa17.73■□□□□ 0.43
DNMT3B-203ENST00000348286 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
DNMT3B-203ENST00000348286 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
DNMT3B-203ENST00000348286 PRXQ9BXM0 1461 aa17.71■□□□□ 0.42
DNMT3B-203ENST00000348286 L3MBTL2Q969R5 705 aa17.7■□□□□ 0.42
DNMT3B-203ENST00000348286 CCER2I3L3R5 266 aa17.69■□□□□ 0.42
DNMT3B-203ENST00000348286 CFTRP13569 1480 aa17.66■□□□□ 0.42
DNMT3B-203ENST00000348286 ANP32AP39687 249 aaKnown RBP17.66■□□□□ 0.42
DNMT3B-203ENST00000348286 SENP3Q9H4L4 574 aaPredicted RBP17.66■□□□□ 0.42
DNMT3B-203ENST00000348286 PKD2Q13563 968 aa17.65■□□□□ 0.42
DNMT3B-203ENST00000348286 CUX1P39880 1505 aa17.65■□□□□ 0.42
DNMT3B-203ENST00000348286 ERCC6Q03468 1493 aa17.64■□□□□ 0.41
DNMT3B-203ENST00000348286 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.41
DNMT3B-203ENST00000348286 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
DNMT3B-203ENST00000348286 B4GALNT3Q6L9W6 998 aa17.63■□□□□ 0.41
DNMT3B-203ENST00000348286 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
DNMT3B-203ENST00000348286 LRRC9Q6ZRR7 1453 aa17.59■□□□□ 0.41
DNMT3B-203ENST00000348286 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
DNMT3B-203ENST00000348286 ERICH3Q5RHP9 1530 aa17.59■□□□□ 0.41
DNMT3B-203ENST00000348286 RRBP1Q9P2E9 1410 aaKnown RBP17.58■□□□□ 0.4
DNMT3B-203ENST00000348286 TSHZ2Q9NRE2 1034 aa17.57■□□□□ 0.4
DNMT3B-203ENST00000348286 NBR1Q14596 966 aa17.56■□□□□ 0.4
DNMT3B-203ENST00000348286 NESP48681 1621 aa17.55■□□□□ 0.4
DNMT3B-203ENST00000348286 WDR43Q15061 677 aaKnown RBP eCLIP17.55■□□□□ 0.4
DNMT3B-203ENST00000348286 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
DNMT3B-203ENST00000348286 ZNF644Q9H582 1327 aaPredicted RBP17.53■□□□□ 0.4
DNMT3B-203ENST00000348286 CCDC18Q5T9S5 1454 aa17.53■□□□□ 0.4
DNMT3B-203ENST00000348286 PPP4R2Q9NY27 417 aa17.53■□□□□ 0.4
DNMT3B-203ENST00000348286 CC2D1BQ5T0F9 858 aaKnown RBP17.52■□□□□ 0.4
DNMT3B-203ENST00000348286 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
DNMT3B-203ENST00000348286 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.39
DNMT3B-203ENST00000348286 FGD6Q6ZV73 1430 aa17.52■□□□□ 0.39
DNMT3B-203ENST00000348286 RBM19Q9Y4C8 960 aaKnown RBP17.51■□□□□ 0.39
DNMT3B-203ENST00000348286 NUP155O75694 1391 aa17.51■□□□□ 0.39
DNMT3B-203ENST00000348286 ANP32EQ9BTT0 268 aa17.5■□□□□ 0.39
DNMT3B-203ENST00000348286 HNRNPMP52272 730 aaKnown RBP eCLIP17.5■□□□□ 0.399e-7■■□□□ 12.9
DNMT3B-203ENST00000348286 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
DNMT3B-203ENST00000348286 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
DNMT3B-203ENST00000348286 ZBTB47Q9UFB7 747 aaPredicted RBP17.46■□□□□ 0.39
DNMT3B-203ENST00000348286 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.388e-7■■■■□ 22.3
DNMT3B-203ENST00000348286 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
DNMT3B-203ENST00000348286 KNSTRNQ9Y448 316 aa17.44■□□□□ 0.38
DNMT3B-203ENST00000348286 CASKIN1Q8WXD9 1431 aa17.43■□□□□ 0.38
DNMT3B-203ENST00000348286 MYOM3Q5VTT5 1437 aa17.42■□□□□ 0.38
DNMT3B-203ENST00000348286 CARMIL2Q6F5E8 1435 aa17.42■□□□□ 0.38
DNMT3B-203ENST00000348286 STAG3Q9UJ98 1225 aa17.41■□□□□ 0.38
DNMT3B-203ENST00000348286 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
DNMT3B-203ENST00000348286 ANKRD30AQ9BXX3 1397 aa17.4■□□□□ 0.38
DNMT3B-203ENST00000348286 PRKRIP1Q9H875 184 aaPredicted RBP17.4■□□□□ 0.38
DNMT3B-203ENST00000348286 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
DNMT3B-203ENST00000348286 NCOA2Q15596 1464 aa17.39■□□□□ 0.37
DNMT3B-203ENST00000348286 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
DNMT3B-203ENST00000348286 NEUROD2Q15784 382 aa17.37■□□□□ 0.37
DNMT3B-203ENST00000348286 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
DNMT3B-203ENST00000348286 ST20-MTHFSA0A0A6YYL1 179 aa17.37■□□□□ 0.37
DNMT3B-203ENST00000348286 TNNT2P45379 298 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms