RNA–Protein interactions for RNA: ENST00000347476.10

NOVA1-202, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 4

Gene NOVA1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-202ENST00000347476 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
NOVA1-202ENST00000347476 BAZ1BQ9UIG0 1483 aaKnown RBP16.01■□□□□ 0.15
NOVA1-202ENST00000347476 CREBZFQ9NS37 354 aa15.98■□□□□ 0.15
NOVA1-202ENST00000347476 NCAPD3P42695 1498 aa15.96■□□□□ 0.14
NOVA1-202ENST00000347476 VASPP50552 380 aaPredicted RBP15.93■□□□□ 0.14
NOVA1-202ENST00000347476 PRKAR2AP13861 404 aaKnown RBP15.92■□□□□ 0.14
NOVA1-202ENST00000347476 CHADLQ6NUI6 762 aa15.91■□□□□ 0.14
NOVA1-202ENST00000347476 RTN4Q9NQC3 1192 aaKnown RBP15.88■□□□□ 0.13
NOVA1-202ENST00000347476 MNX1P50219 401 aaPredicted RBP15.87■□□□□ 0.13
NOVA1-202ENST00000347476 POTEHQ6S545 545 aa15.85■□□□□ 0.13
NOVA1-202ENST00000347476 MIER1Q8N108 512 aa15.83■□□□□ 0.12
NOVA1-202ENST00000347476 PRDM2Q13029 1718 aa15.82■□□□□ 0.12
NOVA1-202ENST00000347476 PLCD3Q8N3E9 789 aa15.78■□□□□ 0.12
NOVA1-202ENST00000347476 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
NOVA1-202ENST00000347476 FARP1Q9Y4F1 1045 aaPredicted RBP15.77■□□□□ 0.12
NOVA1-202ENST00000347476 IFNLR1Q8IU57 520 aaPredicted RBP15.75■□□□□ 0.11
NOVA1-202ENST00000347476 PLEKHG5O94827 1062 aa15.68■□□□□ 0.1
NOVA1-202ENST00000347476 ZBTB47Q9UFB7 747 aaPredicted RBP15.63■□□□□ 0.09
NOVA1-202ENST00000347476 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
NOVA1-202ENST00000347476 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.08
NOVA1-202ENST00000347476 NUBP1P53384 320 aa15.57■□□□□ 0.08
NOVA1-202ENST00000347476 CFTRP13569 1480 aa15.57■□□□□ 0.08
NOVA1-202ENST00000347476 C19orf67A6NJJ6 358 aa15.56■□□□□ 0.08
NOVA1-202ENST00000347476 KLHL34Q8N239 644 aa15.56■□□□□ 0.08
NOVA1-202ENST00000347476 RASEFQ8IZ41 740 aa15.51■□□□□ 0.07
NOVA1-202ENST00000347476 SPOCK2Q92563 424 aa15.49■□□□□ 0.07
NOVA1-202ENST00000347476 EVX2Q03828 476 aa15.48■□□□□ 0.07
NOVA1-202ENST00000347476 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
NOVA1-202ENST00000347476 HAX1O00165 279 aa15.47■□□□□ 0.07
NOVA1-202ENST00000347476 CD44P16070 742 aaKnown RBP15.46■□□□□ 0.07
NOVA1-202ENST00000347476 ABCC8Q09428 1581 aa15.45■□□□□ 0.06
NOVA1-202ENST00000347476 BIVM-ERCC5R4GMW8 1640 aa15.44■□□□□ 0.06
NOVA1-202ENST00000347476 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
NOVA1-202ENST00000347476 NESP48681 1621 aa15.39■□□□□ 0.05
NOVA1-202ENST00000347476 TOP2BQ02880 1626 aa15.38■□□□□ 0.05
NOVA1-202ENST00000347476 SYNJ1O43426 1573 aa15.37■□□□□ 0.05
NOVA1-202ENST00000347476 FANCD2Q9BXW9 1451 aa15.37■□□□□ 0.05
NOVA1-202ENST00000347476 WRNQ14191 1432 aaPredicted RBP eCLIP15.36■□□□□ 0.05
NOVA1-202ENST00000347476 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
NOVA1-202ENST00000347476 CCDC61Q9Y6R9 512 aa15.35■□□□□ 0.05
NOVA1-202ENST00000347476 FAM212AQ96EL1 285 aa15.34■□□□□ 0.05
NOVA1-202ENST00000347476 TSPYL2Q9H2G4 693 aaPredicted RBP15.34■□□□□ 0.05
NOVA1-202ENST00000347476 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
NOVA1-202ENST00000347476 PDS5BQ9NTI5 1447 aa15.33■□□□□ 0.04
NOVA1-202ENST00000347476 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
NOVA1-202ENST00000347476 PAK3O75914 559 aaPredicted RBP15.31■□□□□ 0.04
NOVA1-202ENST00000347476 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
NOVA1-202ENST00000347476 CUX1P39880 1505 aa15.29■□□□□ 0.04
NOVA1-202ENST00000347476 GSE1Q14687 1217 aa15.27■□□□□ 0.04
NOVA1-202ENST00000347476 DCAF8Q5TAQ9 597 aa15.27■□□□□ 0.04
NOVA1-202ENST00000347476 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
NOVA1-202ENST00000347476 PHF12Q96QT6 1004 aa15.23■□□□□ 0.03
NOVA1-202ENST00000347476 PKD2Q13563 968 aa15.21■□□□□ 0.03
NOVA1-202ENST00000347476 SP7Q8TDD2 431 aaPredicted RBP15.21■□□□□ 0.03
NOVA1-202ENST00000347476 TOPBP1Q92547 1522 aa15.21■□□□□ 0.03
NOVA1-202ENST00000347476 WDR97A6NE52 1622 aa15.21■□□□□ 0.02
NOVA1-202ENST00000347476 MRC2Q9UBG0 1479 aa15.2■□□□□ 0.02
NOVA1-202ENST00000347476 TRIM41Q8WV44 630 aa15.2■□□□□ 0.02
NOVA1-202ENST00000347476 CIZ1Q9ULV3 898 aaPredicted RBP15.2■□□□□ 0.02
NOVA1-202ENST00000347476 WDR62O43379 1518 aa15.2■□□□□ 0.02
NOVA1-202ENST00000347476 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
NOVA1-202ENST00000347476 KIF12Q96FN5 646 aa15.18■□□□□ 0.02
NOVA1-202ENST00000347476 ERCC6Q03468 1493 aa15.18■□□□□ 0.02
NOVA1-202ENST00000347476 FGD5Q6ZNL6 1462 aa15.15■□□□□ 0.02
NOVA1-202ENST00000347476 CHRM1P11229 460 aaPredicted RBP15.15■□□□□ 0.02
NOVA1-202ENST00000347476 ECM2O94769 699 aaPredicted RBP15.14■□□□□ 0.01
NOVA1-202ENST00000347476 PYGBP11216 843 aa15.14■□□□□ 0.01
NOVA1-202ENST00000347476 EEA1Q15075 1411 aa15.12■□□□□ 0.01
NOVA1-202ENST00000347476 GABBR2O75899 941 aa15.12■□□□□ 0.01
NOVA1-202ENST00000347476 MAP3K13O43283 966 aa15.11■□□□□ 0.01
NOVA1-202ENST00000347476 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
NOVA1-202ENST00000347476 CLCN6P51797 869 aa15.1■□□□□ 0.01
NOVA1-202ENST00000347476 SLC24A1O60721 1099 aa15.09■□□□□ 0.01
NOVA1-202ENST00000347476 GALR2O43603 387 aaPredicted RBP15.07■□□□□ 0
NOVA1-202ENST00000347476 MS4A3Q96HJ5 214 aa15.07■□□□□ 0
NOVA1-202ENST00000347476 SGIP1Q9BQI5 828 aa15.07■□□□□ 0
NOVA1-202ENST00000347476 TARBP1Q13395 1621 aaKnown RBP15.06■□□□□ 0
NOVA1-202ENST00000347476 ABCA10Q8WWZ4 1543 aa15.05■□□□□ -0
NOVA1-202ENST00000347476 ABCA5Q8WWZ7 1642 aa15.05■□□□□ -0
NOVA1-202ENST00000347476 RNF25Q96BH1 459 aaPredicted RBP15.03■□□□□ -0
NOVA1-202ENST00000347476 PBRM1Q86U86 1689 aa15.03■□□□□ -0
NOVA1-202ENST00000347476 PCDHB13Q9Y5F0 798 aa15.02■□□□□ -0
NOVA1-202ENST00000347476 KIF21BO75037 1637 aa15.02□□□□□ -0.01
NOVA1-202ENST00000347476 IFNL1Q8IU54 200 aa15.01□□□□□ -0.01
NOVA1-202ENST00000347476 SOGA1O94964 1423 aa15□□□□□ -0.01
NOVA1-202ENST00000347476 CUL7Q14999 1698 aa14.99□□□□□ -0.01
NOVA1-202ENST00000347476 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
NOVA1-202ENST00000347476 IFT140Q96RY7 1462 aa14.98□□□□□ -0.01
NOVA1-202ENST00000347476 CUX2O14529 1486 aa14.97□□□□□ -0.01
NOVA1-202ENST00000347476 TRPC6Q9Y210 931 aa14.97□□□□□ -0.01
NOVA1-202ENST00000347476 PCDHB8Q9UN66 801 aa14.96□□□□□ -0.01
NOVA1-202ENST00000347476 RAD54L2Q9Y4B4 1467 aa14.95□□□□□ -0.02
NOVA1-202ENST00000347476 EIF4G3O43432 1585 aaKnown RBP14.95□□□□□ -0.02
NOVA1-202ENST00000347476 RGL2O15211 777 aa14.95□□□□□ -0.02
NOVA1-202ENST00000347476 RUSC2Q8N2Y8 1516 aa14.94□□□□□ -0.02
NOVA1-202ENST00000347476 ZNF467Q7Z7K2 595 aaPredicted RBP14.94□□□□□ -0.02
NOVA1-202ENST00000347476 ERICH3Q5RHP9 1530 aa14.93□□□□□ -0.02
NOVA1-202ENST00000347476 RIOK3O14730 519 aaKnown RBP14.88□□□□□ -0.03
NOVA1-202ENST00000347476 POTEIP0CG38 1075 aa14.88□□□□□ -0.03
NOVA1-202ENST00000347476 GOLGA3Q08378 1498 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms