RNA–Protein interactions for RNA: ENST00000347476.10

NOVA1-202, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 4

Gene NOVA1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-202ENST00000347476 AEBP2Q6ZN18 517 aaPredicted RBP30.13■■■□□ 2.41
NOVA1-202ENST00000347476 CHIC1Q5VXU3 224 aa29.3■■■□□ 2.28
NOVA1-202ENST00000347476 PHF23Q9BUL5 403 aaPredicted RBP25.81■■□□□ 1.72
NOVA1-202ENST00000347476 SENP3Q9H4L4 574 aaPredicted RBP25.48■■□□□ 1.67
NOVA1-202ENST00000347476 FOXD1Q16676 465 aa23.72■■□□□ 1.39
NOVA1-202ENST00000347476 PLPPR3Q6T4P5 718 aa23.69■■□□□ 1.38
NOVA1-202ENST00000347476 PPP6R1Q9UPN7 881 aa22.78■■□□□ 1.24
NOVA1-202ENST00000347476 ADRA2BP18089 450 aa22.7■■□□□ 1.22
NOVA1-202ENST00000347476 PIAS4Q8N2W9 510 aaPredicted RBP22.27■■□□□ 1.16
NOVA1-202ENST00000347476 MSH5O43196 834 aa21.82■■□□□ 1.08
NOVA1-202ENST00000347476 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
NOVA1-202ENST00000347476 PPP4R3CPQ6ZMV5 832 aa20.88■□□□□ 0.93
NOVA1-202ENST00000347476 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
NOVA1-202ENST00000347476 MAPK8IP2Q13387 824 aaPredicted RBP20.63■□□□□ 0.89
NOVA1-202ENST00000347476 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
NOVA1-202ENST00000347476 KCNA4P22459 653 aa20.34■□□□□ 0.85
NOVA1-202ENST00000347476 CNKSR2Q8WXI2 1034 aa20.3■□□□□ 0.84
NOVA1-202ENST00000347476 NCBP3Q53F19 620 aaKnown RBP20.22■□□□□ 0.83
NOVA1-202ENST00000347476 POTEDQ86YR6 584 aa20.08■□□□□ 0.81
NOVA1-202ENST00000347476 NPM3O75607 178 aaKnown RBP20.05■□□□□ 0.8
NOVA1-202ENST00000347476 RNF216Q9NWF9 866 aaPredicted RBP19.95■□□□□ 0.78
NOVA1-202ENST00000347476 HOXD11P31277 338 aaPredicted RBP19.94■□□□□ 0.78
NOVA1-202ENST00000347476 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
NOVA1-202ENST00000347476 DCAF8L1A6NGE4 600 aa19.31■□□□□ 0.68
NOVA1-202ENST00000347476 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
NOVA1-202ENST00000347476 SLC4A2P04920 1241 aa19■□□□□ 0.63
NOVA1-202ENST00000347476 EHMT2Q96KQ7 1210 aa18.97■□□□□ 0.63
NOVA1-202ENST00000347476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.61
NOVA1-202ENST00000347476 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
NOVA1-202ENST00000347476 ZBTB22O15209 634 aa18.78■□□□□ 0.6
NOVA1-202ENST00000347476 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
NOVA1-202ENST00000347476 FOXD4L1Q9NU39 408 aa18.71■□□□□ 0.59
NOVA1-202ENST00000347476 U3KPZ7 1027 aaPredicted RBP18.68■□□□□ 0.58
NOVA1-202ENST00000347476 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
NOVA1-202ENST00000347476 C1QBPQ07021 282 aaKnown RBP18.49■□□□□ 0.55
NOVA1-202ENST00000347476 MYCNP04198 464 aaPredicted RBP18.48■□□□□ 0.55
NOVA1-202ENST00000347476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.29■□□□□ 0.52
NOVA1-202ENST00000347476 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
NOVA1-202ENST00000347476 SAMD1Q6SPF0 538 aaPredicted RBP18.25■□□□□ 0.51
NOVA1-202ENST00000347476 CACNB1Q02641 598 aaPredicted RBP18.21■□□□□ 0.51
NOVA1-202ENST00000347476 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
NOVA1-202ENST00000347476 ATXN8OSP0DMR3 200 aa18.07■□□□□ 0.48
NOVA1-202ENST00000347476 APLP2Q06481 763 aa18.07■□□□□ 0.48
NOVA1-202ENST00000347476 ATF5Q9Y2D1 282 aaPredicted RBP18.06■□□□□ 0.48
NOVA1-202ENST00000347476 CAPN15O75808 1086 aa17.98■□□□□ 0.47
NOVA1-202ENST00000347476 ZNF219Q9P2Y4 722 aaPredicted RBP17.91■□□□□ 0.46
NOVA1-202ENST00000347476 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
NOVA1-202ENST00000347476 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
NOVA1-202ENST00000347476 DSG3P32926 999 aa17.82■□□□□ 0.44
NOVA1-202ENST00000347476 ABCB7O75027 752 aa17.66■□□□□ 0.42
NOVA1-202ENST00000347476 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
NOVA1-202ENST00000347476 POLA2Q14181 598 aa17.62■□□□□ 0.41
NOVA1-202ENST00000347476 ABCC9O60706 1549 aa17.6■□□□□ 0.41
NOVA1-202ENST00000347476 MYO15BQ96JP2 1530 aa17.51■□□□□ 0.39
NOVA1-202ENST00000347476 NACADO15069 1562 aa17.42■□□□□ 0.38
NOVA1-202ENST00000347476 RB1CC1Q8TDY2 1594 aa17.33■□□□□ 0.37
NOVA1-202ENST00000347476 MKRN4PQ13434 485 aaPredicted RBP17.3■□□□□ 0.36
NOVA1-202ENST00000347476 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
NOVA1-202ENST00000347476 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
NOVA1-202ENST00000347476 FBLN2P98095 1184 aa17.16■□□□□ 0.34
NOVA1-202ENST00000347476 UNC13AQ9UPW8 1703 aa17.08■□□□□ 0.32
NOVA1-202ENST00000347476 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
NOVA1-202ENST00000347476 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
NOVA1-202ENST00000347476 SHROOM4Q9ULL8 1493 aa16.89■□□□□ 0.29
NOVA1-202ENST00000347476 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
NOVA1-202ENST00000347476 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
NOVA1-202ENST00000347476 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
NOVA1-202ENST00000347476 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
NOVA1-202ENST00000347476 SSUH2Q9Y2M2 353 aa16.79■□□□□ 0.28
NOVA1-202ENST00000347476 SPDYE4A6NLX3 237 aa16.75■□□□□ 0.27
NOVA1-202ENST00000347476 FKBP8Q14318 412 aa16.75■□□□□ 0.27
NOVA1-202ENST00000347476 BICRAQ9NZM4 1560 aa16.74■□□□□ 0.27
NOVA1-202ENST00000347476 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
NOVA1-202ENST00000347476 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
NOVA1-202ENST00000347476 PROM2Q8N271 834 aa16.62■□□□□ 0.25
NOVA1-202ENST00000347476 REM2Q8IYK8 340 aaPredicted RBP16.56■□□□□ 0.24
NOVA1-202ENST00000347476 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
NOVA1-202ENST00000347476 BAZ1AQ9NRL2 1556 aaPredicted RBP16.45■□□□□ 0.22
NOVA1-202ENST00000347476 SMARCA4P51532 1647 aa16.41■□□□□ 0.22
NOVA1-202ENST00000347476 PITPNM1O00562 1244 aa16.38■□□□□ 0.21
NOVA1-202ENST00000347476 SPDYE1Q8NFV5 336 aaPredicted RBP16.35■□□□□ 0.21
NOVA1-202ENST00000347476 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
NOVA1-202ENST00000347476 MROH2BQ7Z745 1585 aa16.3■□□□□ 0.2
NOVA1-202ENST00000347476 EIF4G1Q04637 1599 aaKnown RBP16.27■□□□□ 0.2
NOVA1-202ENST00000347476 CHRDL2Q6WN34 429 aa16.26■□□□□ 0.19
NOVA1-202ENST00000347476 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
NOVA1-202ENST00000347476 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
NOVA1-202ENST00000347476 WIZO95785 1651 aa16.23■□□□□ 0.19
NOVA1-202ENST00000347476 CLEC11AQ9Y240 323 aa16.22■□□□□ 0.19
NOVA1-202ENST00000347476 STAG3Q9UJ98 1225 aa16.2■□□□□ 0.18
NOVA1-202ENST00000347476 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
NOVA1-202ENST00000347476 FBXO3Q9UK99 471 aa16.13■□□□□ 0.17
NOVA1-202ENST00000347476 FXR2P51116 673 aaKnown RBP eCLIP16.12■□□□□ 0.17
NOVA1-202ENST00000347476 TOP2AP11388 1531 aaKnown RBP16.12■□□□□ 0.17
NOVA1-202ENST00000347476 PRR29P0C7W0 189 aa16.09■□□□□ 0.17
NOVA1-202ENST00000347476 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
NOVA1-202ENST00000347476 SUPT5HO00267 1087 aaKnown RBP16.08■□□□□ 0.16
NOVA1-202ENST00000347476 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
NOVA1-202ENST00000347476 PIP4P2Q8N4L2 257 aa16.06■□□□□ 0.16
NOVA1-202ENST00000347476 ATAD2BQ9ULI0 1458 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms