RNA–Protein interactions for RNA: ENST00000346246.9

ARID3B-201, Transcript of AT-rich interaction domain 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARID3B, Length 4,271 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3B-201ENST00000346246 MYT1Q01538 1121 aa20.22■□□□□ 0.83
ARID3B-201ENST00000346246 HNRNPUQ00839 825 aaKnown RBP eCLIP20.2■□□□□ 0.82
ARID3B-201ENST00000346246 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
ARID3B-201ENST00000346246 SETD5Q9C0A6 1442 aa20.14■□□□□ 0.81
ARID3B-201ENST00000346246 FAM9BQ8IZU0 186 aa20.13■□□□□ 0.81
ARID3B-201ENST00000346246 NCAPD3P42695 1498 aa20.13■□□□□ 0.81
ARID3B-201ENST00000346246 IGF1RP08069 1367 aa20.12■□□□□ 0.81
ARID3B-201ENST00000346246 SLC4A1APQ9BWU0 796 aaKnown RBP20.12■□□□□ 0.81
ARID3B-201ENST00000346246 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
ARID3B-201ENST00000346246 DHX57Q6P158 1386 aaKnown RBP20.12■□□□□ 0.81
ARID3B-201ENST00000346246 FHOD3Q2V2M9 1422 aa20.11■□□□□ 0.81
ARID3B-201ENST00000346246 KIF21BO75037 1637 aa20.1■□□□□ 0.81
ARID3B-201ENST00000346246 EIF4G2P78344 907 aaKnown RBP eCLIP20.07■□□□□ 0.8
ARID3B-201ENST00000346246 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
ARID3B-201ENST00000346246 KDM2AQ9Y2K7 1162 aa20.05■□□□□ 0.8
ARID3B-201ENST00000346246 TSPY4P0CV99 314 aa20.04■□□□□ 0.8
ARID3B-201ENST00000346246 TSPY10P0CW01 314 aa20.04■□□□□ 0.8
ARID3B-201ENST00000346246 ARHGAP35Q9NRY4 1499 aa20.03■□□□□ 0.8
ARID3B-201ENST00000346246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.02■□□□□ 0.8
ARID3B-201ENST00000346246 CFDP1Q9UEE9 299 aaPredicted RBP20.02■□□□□ 0.8
ARID3B-201ENST00000346246 FANCD2Q9BXW9 1451 aa20.02■□□□□ 0.8
ARID3B-201ENST00000346246 FGD5Q6ZNL6 1462 aa20■□□□□ 0.79
ARID3B-201ENST00000346246 MRS2Q9HD23 443 aa20■□□□□ 0.79
ARID3B-201ENST00000346246 IRX6P78412 446 aaPredicted RBP19.99■□□□□ 0.79
ARID3B-201ENST00000346246 ARAP1Q96P48 1450 aa19.99■□□□□ 0.79
ARID3B-201ENST00000346246 PLEKHD1A6NEE1 506 aa19.98■□□□□ 0.79
ARID3B-201ENST00000346246 PDS5BQ9NTI5 1447 aa19.97■□□□□ 0.79
ARID3B-201ENST00000346246 RAD54L2Q9Y4B4 1467 aa19.96■□□□□ 0.79
ARID3B-201ENST00000346246 FOXD1Q16676 465 aa19.96■□□□□ 0.79
ARID3B-201ENST00000346246 CFTRP13569 1480 aa19.95■□□□□ 0.78
ARID3B-201ENST00000346246 FMN1Q68DA7 1419 aa19.95■□□□□ 0.78
ARID3B-201ENST00000346246 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.78
ARID3B-201ENST00000346246 PRXQ9BXM0 1461 aa19.94■□□□□ 0.78
ARID3B-201ENST00000346246 PPP1R15AO75807 674 aaPredicted RBP19.93■□□□□ 0.78
ARID3B-201ENST00000346246 SENP3-EIF4A1A0A087X0R7 540 aa19.92■□□□□ 0.78
ARID3B-201ENST00000346246 SALL2Q9Y467 1007 aaPredicted RBP19.91■□□□□ 0.78
ARID3B-201ENST00000346246 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
ARID3B-201ENST00000346246 SUPT16HQ9Y5B9 1047 aaKnown RBP19.91■□□□□ 0.78
ARID3B-201ENST00000346246 UNC13AQ9UPW8 1703 aa19.91■□□□□ 0.78
ARID3B-201ENST00000346246 CUX1P39880 1505 aa19.91■□□□□ 0.78
ARID3B-201ENST00000346246 KCNH8Q96L42 1107 aa19.9■□□□□ 0.78
ARID3B-201ENST00000346246 TMC1Q8TDI8 760 aa19.86■□□□□ 0.77
ARID3B-201ENST00000346246 PHLDB1Q86UU1 1377 aa19.86■□□□□ 0.77
ARID3B-201ENST00000346246 RGL3Q3MIN7 710 aa19.85■□□□□ 0.77
ARID3B-201ENST00000346246 ERICH3Q5RHP9 1530 aa19.84■□□□□ 0.77
ARID3B-201ENST00000346246 ERCC6Q03468 1493 aa19.83■□□□□ 0.77
ARID3B-201ENST00000346246 HSPA5P11021 654 aaKnown RBP19.82■□□□□ 0.76
ARID3B-201ENST00000346246 MPHOSPH9Q99550 1183 aa19.81■□□□□ 0.76
ARID3B-201ENST00000346246 PEG3Q9GZU2 1588 aa19.79■□□□□ 0.76
ARID3B-201ENST00000346246 HMGXB3Q12766 1538 aa19.78■□□□□ 0.76
ARID3B-201ENST00000346246 NESP48681 1621 aa19.77■□□□□ 0.76
ARID3B-201ENST00000346246 DAXXQ9UER7 740 aaPredicted RBP19.76■□□□□ 0.75
ARID3B-201ENST00000346246 LRRC9Q6ZRR7 1453 aa19.75■□□□□ 0.75
ARID3B-201ENST00000346246 CHGAP10645 457 aaKnown RBP19.74■□□□□ 0.75
ARID3B-201ENST00000346246 RRBP1Q9P2E9 1410 aaKnown RBP19.74■□□□□ 0.75
ARID3B-201ENST00000346246 CARD11Q9BXL7 1154 aa19.74■□□□□ 0.75
ARID3B-201ENST00000346246 L3MBTL2Q969R5 705 aa19.73■□□□□ 0.75
ARID3B-201ENST00000346246 CCER2I3L3R5 266 aa19.73■□□□□ 0.75
ARID3B-201ENST00000346246 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
ARID3B-201ENST00000346246 PKD2Q13563 968 aa19.69■□□□□ 0.74
ARID3B-201ENST00000346246 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
ARID3B-201ENST00000346246 CCDC136Q96JN2 1154 aa19.65■□□□□ 0.74
ARID3B-201ENST00000346246 DCAF11Q8TEB1 546 aa19.65■□□□□ 0.74
ARID3B-201ENST00000346246 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.73
ARID3B-201ENST00000346246 CC2D2AQ9P2K1 1620 aa19.63■□□□□ 0.73
ARID3B-201ENST00000346246 CCDC18Q5T9S5 1454 aa19.62■□□□□ 0.73
ARID3B-201ENST00000346246 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.73
ARID3B-201ENST00000346246 JPH4Q96JJ6 628 aa19.62■□□□□ 0.73
ARID3B-201ENST00000346246 POLA1P09884 1462 aaPredicted RBP19.61■□□□□ 0.73
ARID3B-201ENST00000346246 CASKIN1Q8WXD9 1431 aa19.6■□□□□ 0.73
ARID3B-201ENST00000346246 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
ARID3B-201ENST00000346246 NPM1P06748 294 aaKnown RBP eCLIP19.59■□□□□ 0.73
ARID3B-201ENST00000346246 ZNF644Q9H582 1327 aaPredicted RBP19.59■□□□□ 0.73
ARID3B-201ENST00000346246 RTL5Q5HYW3 569 aaPredicted RBP19.59■□□□□ 0.73
ARID3B-201ENST00000346246 NPM2Q86SE8 214 aaKnown RBP19.59■□□□□ 0.73
ARID3B-201ENST00000346246 CARMIL2Q6F5E8 1435 aa19.56■□□□□ 0.72
ARID3B-201ENST00000346246 HNRNPMP52272 730 aaKnown RBP eCLIP19.55■□□□□ 0.72
ARID3B-201ENST00000346246 NUP155O75694 1391 aa19.55■□□□□ 0.72
ARID3B-201ENST00000346246 MYOM3Q5VTT5 1437 aa19.54■□□□□ 0.72
ARID3B-201ENST00000346246 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
ARID3B-201ENST00000346246 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
ARID3B-201ENST00000346246 CANXP27824 592 aaKnown RBP19.52■□□□□ 0.71
ARID3B-201ENST00000346246 ANP32AP39687 249 aaKnown RBP19.52■□□□□ 0.71
ARID3B-201ENST00000346246 NCOA2Q15596 1464 aa19.51■□□□□ 0.71
ARID3B-201ENST00000346246 B4GALNT3Q6L9W6 998 aa19.5■□□□□ 0.71
ARID3B-201ENST00000346246 FYCO1Q9BQS8 1478 aa19.49■□□□□ 0.71
ARID3B-201ENST00000346246 WDR43Q15061 677 aaKnown RBP eCLIP19.49■□□□□ 0.71
ARID3B-201ENST00000346246 ANKRD30AQ9BXX3 1397 aa19.49■□□□□ 0.71
ARID3B-201ENST00000346246 BIVM-ERCC5R4GMW8 1640 aa19.48■□□□□ 0.71
ARID3B-201ENST00000346246 UACAQ9BZF9 1416 aa19.48■□□□□ 0.71
ARID3B-201ENST00000346246 CC2D1BQ5T0F9 858 aaKnown RBP19.46■□□□□ 0.71
ARID3B-201ENST00000346246 PPP4R2Q9NY27 417 aa19.46■□□□□ 0.71
ARID3B-201ENST00000346246 TSHZ2Q9NRE2 1034 aa19.45■□□□□ 0.7
ARID3B-201ENST00000346246 DNMBPQ6XZF7 1577 aa19.42■□□□□ 0.7
ARID3B-201ENST00000346246 ABCA10Q8WWZ4 1543 aa19.41■□□□□ 0.7
ARID3B-201ENST00000346246 KNSTRNQ9Y448 316 aa19.4■□□□□ 0.7
ARID3B-201ENST00000346246 PRKRIP1Q9H875 184 aaPredicted RBP19.38■□□□□ 0.69
ARID3B-201ENST00000346246 RBM19Q9Y4C8 960 aaKnown RBP19.38■□□□□ 0.69
ARID3B-201ENST00000346246 EFCAB5A4FU69 1503 aa19.38■□□□□ 0.69
ARID3B-201ENST00000346246 STAG3Q9UJ98 1225 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms