RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 MRC2Q9UBG0 1479 aa23.14■■□□□ 1.29
CLCN2-202ENST00000344937 ARAP1Q96P48 1450 aa23.13■■□□□ 1.29
CLCN2-202ENST00000344937 BCL11AQ9H165 835 aa23.13■■□□□ 1.29
CLCN2-202ENST00000344937 WDR97A6NE52 1622 aa23.12■■□□□ 1.29
CLCN2-202ENST00000344937 GAPVD1Q14C86 1478 aa23.1■■□□□ 1.29
CLCN2-202ENST00000344937 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
CLCN2-202ENST00000344937 ARHGAP35Q9NRY4 1499 aa23.08■■□□□ 1.29
CLCN2-202ENST00000344937 P3H3Q8IVL6 736 aa23.08■■□□□ 1.29
CLCN2-202ENST00000344937 TARBP1Q13395 1621 aaKnown RBP23.07■■□□□ 1.28
CLCN2-202ENST00000344937 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.281e-6■■■■■ 27.6
CLCN2-202ENST00000344937 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
CLCN2-202ENST00000344937 CUL7Q14999 1698 aa22.99■■□□□ 1.27
CLCN2-202ENST00000344937 ZNF608Q9ULD9 1512 aaPredicted RBP22.97■■□□□ 1.27
CLCN2-202ENST00000344937 KANK4Q5T7N3 995 aaPredicted RBP22.96■■□□□ 1.27
CLCN2-202ENST00000344937 WDR62O43379 1518 aa22.95■■□□□ 1.26
CLCN2-202ENST00000344937 ITGAEP38570 1179 aa22.95■■□□□ 1.26
CLCN2-202ENST00000344937 ATP1B4Q9UN42 357 aaPredicted RBP22.89■■□□□ 1.25
CLCN2-202ENST00000344937 FHOD3Q2V2M9 1422 aa22.87■■□□□ 1.25
CLCN2-202ENST00000344937 IFT140Q96RY7 1462 aa22.87■■□□□ 1.25
CLCN2-202ENST00000344937 PBRM1Q86U86 1689 aa22.86■■□□□ 1.25
CLCN2-202ENST00000344937 THOC2Q8NI27 1593 aaKnown RBP22.85■■□□□ 1.25
CLCN2-202ENST00000344937 CTTNBP2Q8WZ74 1663 aa22.84■■□□□ 1.25
CLCN2-202ENST00000344937 ANP32EQ9BTT0 268 aa22.83■■□□□ 1.25
CLCN2-202ENST00000344937 GRIN2BQ13224 1484 aa22.81■■□□□ 1.24
CLCN2-202ENST00000344937 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
CLCN2-202ENST00000344937 ADAMTS12P58397 1594 aa22.75■■□□□ 1.23
CLCN2-202ENST00000344937 EIF4G3O43432 1585 aaKnown RBP22.74■■□□□ 1.23
CLCN2-202ENST00000344937 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
CLCN2-202ENST00000344937 FBLN2P98095 1184 aa22.71■■□□□ 1.23
CLCN2-202ENST00000344937 PCF11O94913 1555 aaKnown RBP22.71■■□□□ 1.23
CLCN2-202ENST00000344937 EFCAB5A4FU69 1503 aa22.69■■□□□ 1.22
CLCN2-202ENST00000344937 TIAM1Q13009 1591 aa22.65■■□□□ 1.22
CLCN2-202ENST00000344937 KCNH8Q96L42 1107 aa22.64■■□□□ 1.21
CLCN2-202ENST00000344937 BCANQ96GW7 911 aa22.63■■□□□ 1.21
CLCN2-202ENST00000344937 CHMP7Q8WUX9 453 aaPredicted RBP22.63■■□□□ 1.21
CLCN2-202ENST00000344937 SAMD9Q5K651 1589 aa22.61■■□□□ 1.21
CLCN2-202ENST00000344937 SUPT16HQ9Y5B9 1047 aaKnown RBP22.61■■□□□ 1.21
CLCN2-202ENST00000344937 IQGAP2Q13576 1575 aa22.6■■□□□ 1.21
CLCN2-202ENST00000344937 TSHZ2Q9NRE2 1034 aa22.59■■□□□ 1.21
CLCN2-202ENST00000344937 FMN1Q68DA7 1419 aa22.59■■□□□ 1.21
CLCN2-202ENST00000344937 CASKIN1Q8WXD9 1431 aa22.59■■□□□ 1.21
CLCN2-202ENST00000344937 LRRC9Q6ZRR7 1453 aa22.59■■□□□ 1.21
CLCN2-202ENST00000344937 DHX57Q6P158 1386 aaKnown RBP22.58■■□□□ 1.21
CLCN2-202ENST00000344937 GRIN2AQ12879 1464 aa22.58■■□□□ 1.2
CLCN2-202ENST00000344937 FYCO1Q9BQS8 1478 aa22.56■■□□□ 1.2
CLCN2-202ENST00000344937 ARID3CA6NKF2 412 aa22.56■■□□□ 1.2
CLCN2-202ENST00000344937 MAP3K1Q13233 1512 aa22.53■■□□□ 1.2
CLCN2-202ENST00000344937 MAGI1Q96QZ7 1491 aaPredicted RBP22.52■■□□□ 1.2
CLCN2-202ENST00000344937 PHLDB1Q86UU1 1377 aa22.52■■□□□ 1.2
CLCN2-202ENST00000344937 PRKCSHP14314 528 aaPredicted RBP22.52■■□□□ 1.2
CLCN2-202ENST00000344937 HIRIP3Q9BW71 556 aaPredicted RBP22.51■■□□□ 1.19
CLCN2-202ENST00000344937 RRBP1Q9P2E9 1410 aaKnown RBP22.51■■□□□ 1.19
CLCN2-202ENST00000344937 CCNB3Q8WWL7 1395 aa22.51■■□□□ 1.19
CLCN2-202ENST00000344937 CFAP43Q8NDM7 1665 aa22.5■■□□□ 1.19
CLCN2-202ENST00000344937 SYNJ2O15056 1496 aa22.49■■□□□ 1.19
CLCN2-202ENST00000344937 KIAA0586Q9BVV6 1533 aa22.49■■□□□ 1.19
CLCN2-202ENST00000344937 LRRIQ1Q96JM4 1722 aa22.46■■□□□ 1.19
CLCN2-202ENST00000344937 FAM50AQ14320 339 aaKnown RBP22.45■■□□□ 1.18
CLCN2-202ENST00000344937 CEP170Q5SW79 1584 aa22.45■■□□□ 1.18
CLCN2-202ENST00000344937 MTUS2Q5JR59 1369 aa22.43■■□□□ 1.18
CLCN2-202ENST00000344937 DDX10Q13206 875 aaKnown RBP22.43■■□□□ 1.18
CLCN2-202ENST00000344937 UGGT2Q9NYU1 1516 aa22.43■■□□□ 1.18
CLCN2-202ENST00000344937 DISP1Q96F81 1524 aa22.41■■□□□ 1.18
CLCN2-202ENST00000344937 SIN3AQ96ST3 1273 aa22.39■■□□□ 1.18
CLCN2-202ENST00000344937 CLSPNQ9HAW4 1339 aa22.39■■□□□ 1.17
CLCN2-202ENST00000344937 JPH4Q96JJ6 628 aa22.38■■□□□ 1.17
CLCN2-202ENST00000344937 KIAA0556O60303 1618 aa22.36■■□□□ 1.17
CLCN2-202ENST00000344937 CDK13Q14004 1512 aaKnown RBP22.34■■□□□ 1.17
CLCN2-202ENST00000344937 NUP160Q12769 1436 aa22.33■■□□□ 1.17
CLCN2-202ENST00000344937 FKBP8Q14318 412 aa22.32■■□□□ 1.16
CLCN2-202ENST00000344937 MAGI3Q5TCQ9 1506 aa22.32■■□□□ 1.16
CLCN2-202ENST00000344937 EPRSP07814 1512 aaKnown RBP22.3■■□□□ 1.16
CLCN2-202ENST00000344937 TRIM52Q96A61 297 aa22.3■■□□□ 1.16
CLCN2-202ENST00000344937 HECW1Q76N89 1606 aa22.28■■□□□ 1.16
CLCN2-202ENST00000344937 NCOA2Q15596 1464 aa22.27■■□□□ 1.16
CLCN2-202ENST00000344937 RAB3GAP2Q9H2M9 1393 aa22.26■■□□□ 1.15
CLCN2-202ENST00000344937 CCDC18Q5T9S5 1454 aa22.24■■□□□ 1.15
CLCN2-202ENST00000344937 FGD6Q6ZV73 1430 aa22.24■■□□□ 1.15
CLCN2-202ENST00000344937 PLB1Q6P1J6 1458 aa22.24■■□□□ 1.15
CLCN2-202ENST00000344937 CHD1O14646 1710 aa22.22■■□□□ 1.15
CLCN2-202ENST00000344937 EHBP1L1Q8N3D4 1523 aa22.21■■□□□ 1.15
CLCN2-202ENST00000344937 NUP153P49790 1475 aaKnown RBP22.21■■□□□ 1.15
CLCN2-202ENST00000344937 CARMIL2Q6F5E8 1435 aa22.21■■□□□ 1.15
CLCN2-202ENST00000344937 SUPT6HQ7KZ85 1726 aaKnown RBP22.19■■□□□ 1.14
CLCN2-202ENST00000344937 RAPGEF6Q8TEU7 1601 aa22.18■■□□□ 1.14
CLCN2-202ENST00000344937 MYOM3Q5VTT5 1437 aa22.17■■□□□ 1.14
CLCN2-202ENST00000344937 PRG4Q92954 1404 aaPredicted RBP22.16■■□□□ 1.14
CLCN2-202ENST00000344937 SETD5Q9C0A6 1442 aa22.13■■□□□ 1.13
CLCN2-202ENST00000344937 PTPRKQ15262 1439 aa22.12■■□□□ 1.13
CLCN2-202ENST00000344937 NEFLP07196 543 aa22.11■■□□□ 1.13
CLCN2-202ENST00000344937 ARHGEF11O15085 1522 aa22.1■■□□□ 1.13
CLCN2-202ENST00000344937 CHIC2Q9UKJ5 165 aa22.08■■□□□ 1.13
CLCN2-202ENST00000344937 CDK11AQ9UQ88 783 aaPredicted RBP22.07■■□□□ 1.12
CLCN2-202ENST00000344937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.07■■□□□ 1.12
CLCN2-202ENST00000344937 PTPN23Q9H3S7 1636 aa22.06■■□□□ 1.12
CLCN2-202ENST00000344937 IRX6P78412 446 aaPredicted RBP22.05■■□□□ 1.12
CLCN2-202ENST00000344937 PTPRGP23470 1445 aa22.05■■□□□ 1.12
CLCN2-202ENST00000344937 ZNF644Q9H582 1327 aaPredicted RBP22.03■■□□□ 1.12
CLCN2-202ENST00000344937 ANP32CO43423 234 aa22.03■■□□□ 1.12
CLCN2-202ENST00000344937 ERCC6L2Q5T890 1561 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms